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CcUC06G123720 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC06G123720
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionTransmembrane protein 230
Genome locationCicolChr06:26149377..26151892
RNA-Seq ExpressionCcUC06G123720
SyntenyCcUC06G123720
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021684.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]6.4e-4197.8Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGIVVG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

XP_004146339.1 transmembrane protein 230 [Cucumis sativus]4.9e-4196.7Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKG
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

XP_008453547.1 PREDICTED: transmembrane protein 230-like [Cucumis melo]1.7e-4197.8Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKG
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

XP_022931504.1 transmembrane protein 230-like [Cucurbita moschata]8.4e-4196.7Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

XP_038879685.1 transmembrane protein 230 [Benincasa hispida]4.5e-42100Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

TrEMBL top hitse value%identityAlignment
A0A0A0LUC1 Transmembrane protein 2302.4e-4196.7Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKG
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

A0A1S3BWL2 Transmembrane protein 2308.2e-4297.8Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFMASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKG
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

A0A6J1EUE9 Transmembrane protein 2304.1e-4196.7Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

A0A6J1I4W8 Transmembrane protein 2304.1e-4196.7Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

A0A6J1JDX9 Transmembrane protein 2301.2e-4096.7Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        MAYVDHAFSI DEDI+MDSPF VNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2302.4e-0646.27Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KG
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

Q5R8X3 Transmembrane protein 2301.4e-0646.27Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KG
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

Q5ZLH4 Transmembrane protein 2301.4e-0647.76Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        P K IALAV L + G   I++GA + +  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KG
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

Q8CIB6 Transmembrane protein 2302.4e-0646.27Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KG
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

Q96A57 Transmembrane protein 2302.4e-0646.27Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KG
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)3.0e-3676.92Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        MAYVDHAFSI+DED+M+ + +TV+NRPP+KEI+LAV LLVFG +GIV+G FMA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKG
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)6.9e-0944.78Show/hide
Query:  NRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        +R P K IALAV LL  G + +++  F+    + GD + G    +LG L F+PGFY TRIAYY+++G
Subjt:  NRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)5.4e-3881.32Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG
        MAYVDHAFSITDEDIM+++ +TVNNRPP+KEIALAV+LLVFG +GIV G FMA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKG
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTATGTGGATCATGCGTTTTCGATAACAGACGAAGACATTATGATGGATTCTCCGTTCACCGTCAACAATCGGCCTCCTATTAAGGAGATCGCTCTTGCCGTTTC
TCTTCTCGTTTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCGTTGTTGGGAGCTCTCT
TGTTTATTCCAGGGTTCTATTACACGAGGATTGCCTACTATGCTTATAAGGGACTATTTCTTCTTGAGGATCCATTTTTAGAGATTCCTGATAGTGGAACTTCTAATATT
CCCCCTCCAATCTTAGCCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ACTTCAATTTAATATTTCTTGTTTGCATTTAATTATTCATTAATTAAAATGAAGGTTTTATTTTCCTTCCGCCGACGTGGAAGTTTTTGCCTTTCTTTCTTCTTACTCCA
CCTTCGCTCAGAGTCAAAAACAGGAAGAGAGCTTCTCTTTGCTTCAAAAATCGATTTTCCACCGTCGTCATCGCCGCCTTCTTCACCAAATCTGGTACTCTTTTTCTGCA
GATCGAAGCTCCGACACCTTCTTCTCCGGAAATACAGAGAAAGATGGCGTATGTGGATCATGCGTTTTCGATAACAGACGAAGACATTATGATGGATTCTCCGTTCACCG
TCAACAATCGGCCTCCTATTAAGGAGATCGCTCTTGCCGTTTCTCTTCTCGTTTTCGGCATGATTGGAATCGTCGTTGGTGCCTTCATGGCCAGTAATCGAGTCGGTGGT
GATCGTGCTCACGGGGTGTTTTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCAGGGTTCTATTACACGAGGATTGCCTACTATGCTTATAAGGGACTATTTCTTCTTGA
GGATCCATTTTTAGAGATTCCTGATAGTGGAACTTCTAATATTCCCCCTCCAATCTTAGCCCTGTAGCTCCTATATCATGGAGGCACTTCTCGCATCCTTTTTTGCATCA
TTTCACATGGTTGATATTGATAGTGATATTGAGTATCATCTGATCAAGCTCTTTTTGGAGATGACTTATTCTTTAGCCTCTGTTTTTTAATCCTTTAGTAAACTATTTGC
TAGTTCAATTTGAGTA
Protein sequenceShow/hide protein sequence
MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGLFLLEDPFLEIPDSGTSNI
PPPILAL