; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC06G126560 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC06G126560
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRING-type domain-containing protein
Genome locationCicolChr06:28856377..28858182
RNA-Seq ExpressionCcUC06G126560
SyntenyCcUC06G126560
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR039515 - NOT4, modified RING finger, HC subclass (C4C4-type)
IPR039780 - CCR4-NOT transcription complex subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057903.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]6.3e-18593.97Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSV IK R+DDNLSS+KINMREIGEEND SVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGV DGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISR
        CHKRILEEDGRCPGCRKPYD DPADNETN+  GSPT PLARSCSMISR
Subjt:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISR

TYJ98591.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]3.1e-18493.95Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSV IK R+DDNLSS+KINMREIGEEND SVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGV DGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMIS
        CHKRILEEDGRCPGCRKPYD DPADNETN+  GSPT PLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMIS

XP_004138290.2 uncharacterized protein LOC101211244 [Cucumis sativus]3.1e-18493.41Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSV IK R+DD+LSS+KINMREIGEEND SVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNV+SQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGV DGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLP TDRRFGCGG+ WACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS
        CHKRILEEDGRCPGCRKPYD DPADNETNV  GSPT PLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS

XP_008453149.1 PREDICTED: uncharacterized protein LOC103493947 [Cucumis melo]2.8e-18593.98Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSV IK R+DDNLSS+KINMREIGEEND SVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGV DGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS
        CHKRILEEDGRCPGCRKPYD DPADNETN+  GSPT PLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS

XP_038878939.1 uncharacterized protein LOC120071026 [Benincasa hispida]3.1e-18494Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSV IK REDDNLSSKKINMR+IGEEND SVH HSDF
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGC-GGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCL
        NELGV DGDSGV RGRI QRASMNCRAWRPDDAFRPQSLP LSKQLSLPNTDRRFGC GGIPW CGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCL
Subjt:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGC-GGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCL

Query:  FCHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS
        FCHKRI+EEDGRCPGCRKPYD DPAD+ETNV GGSP F LARSCSMISRS
Subjt:  FCHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS

TrEMBL top hitse value%identityAlignment
A0A1S3BVJ1 uncharacterized protein LOC1034939471.4e-18593.98Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSV IK R+DDNLSS+KINMREIGEEND SVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGV DGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS
        CHKRILEEDGRCPGCRKPYD DPADNETN+  GSPT PLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS

A0A5A7UPV5 Suppressor protein SRP40 isoform X23.1e-18593.97Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSV IK R+DDNLSS+KINMREIGEEND SVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGV DGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISR
        CHKRILEEDGRCPGCRKPYD DPADNETN+  GSPT PLARSCSMISR
Subjt:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISR

A0A5D3BIS7 Suppressor protein SRP40 isoform X21.5e-18493.95Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSV IK R+DDNLSS+KINMREIGEEND SVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        SDSPSNSPPS+GSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQ DQCSESSPRGNVVSQLDSCGD R
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGV DGDS V+RGRI QRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+ VPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMIS
        CHKRILEEDGRCPGCRKPYD DPADNETN+  GSPT PLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMIS

A0A6J1C357 uncharacterized protein LOC1110070164.4e-17690.54Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        MVTDSI NASISLAP+ARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSV IK  +DDNLSSKKINMREIG +N GSVHH SDF
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        S+SPSNSPPS+ SSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT    EEEGDDD LDDWEAIADALAATDKQHDQCSESSPRG+ VSQLDSCGDSR
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGV DGDS ++ GRIAQRA M+CRAWRPDDAFRPQSLPTLSKQLSLPNTDRR+GCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS
        CHKRILEEDGRCPGCRKPY+ DPAD+ETNVHGGSPT PLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS

A0A6J1JM47 uncharacterized protein LOC1114856371.5e-17188.25Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        MVTDSIANASISLAPNARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKWNEEDNRLDS  +K  EDDNLSSKKIN REIGEE+D SVHHHSD 
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR
        S+SPSNSPPS+GSSILGGNDSG HFTGSSSSSSCRSSSSGCRSGSITEEEE+EE DDDCL+DWEA AD L ATDKQHDQCSESSPRG+VVSQL SCGDSR
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSR

Query:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGV DGDS ++ GRIA+RASMN RAWRPDDA RPQSLPTLSKQLSLPNTDRRFGCG +PWACGGV+ VPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Subjt:  NELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS
        CHKRILEEDGRCPGCRKPYD DPADNETN H GSPTFPLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS

SwissProt top hitse value%identityAlignment
O95628 CCR4-NOT transcription complex subunit 41.8e-1252.73Show/hide
Query:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDHDPA
        P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDHDPA

P34909 General negative regulator of transcription subunit 43.7e-1048.08Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYDHD
        CP+C E +D+TD +F PC CG+++C FC+  I    E +GRCP CR+ YD +
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYDHD

Q09818 Putative general negative regulator of transcription C16C9.04c1.4e-0948Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDHD
        CP+C E++D++D +F PC CG+R+C FC   I E+ +GRCP CR+ Y  +
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDHD

Q8BT14 CCR4-NOT transcription complex subunit 41.8e-1252.73Show/hide
Query:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDHDPA
        P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDHDPA

Arabidopsis top hitse value%identityAlignment
AT1G74870.1 RING/U-box superfamily protein1.0e-1529.29Show/hide
Query:  KKRVRN--SKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDFSDSPSNSPPSIGSSILGGNDSG
        KKR  N   KLKQ K+D RR+QW+S+    N    E   RL S+  K  +     + +I+  +  E+++  +   S F+ SP        +S+L   DS 
Subjt:  KKRVRN--SKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDFSDSPSNSPPSIGSSILGGNDSG

Query:  PHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSRNELGVEDGDSGVQRGRIAQRAS
                     S    C S  +TEEEEE    DD  D+W+   DAL + +  +++ S       +V++     D   E      D+  +  +  Q A+
Subjt:  PHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSRNELGVEDGDSGVQRGRIAQRAS

Query:  MNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPY
                       ++   S +    N++++ G G               CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y
Subjt:  MNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPY

AT3G45630.1 RNA binding (RRM/RBD/RNP motifs) family protein7.6e-1142.86Show/hide
Query:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDHD
        +CP+C E++DLTD    PC CG+++C++C   I+      + +GRCP CR PYD +
Subjt:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDHD

AT3G48070.1 RING/U-box superfamily protein4.1e-6546.72Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        M++DSI NAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+ A+ NK   EE      +  +  +  +L     N+    +E++   H H  F
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCS--ESSPRGNVVSQLDSCGD
         +S SNSP    +SIL G +S P+F+ SSS     S S G  SG+ITEEE+ +  DD CLDDWEAIADALAA D++H++ +  ES      + Q    G 
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCS--ESSPRGNVVSQLDSCGD

Query:  SRNELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLC
        +  ++ + D  +  QR     R   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDS+FLPC CGFRLC
Subjt:  SRNELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS
        LFCHK I + DGRCPGCRKPY+ +    E +V GG  T  LARS SM  RS
Subjt:  LFCHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISRS

AT3G48070.2 RING/U-box superfamily protein1.2e-6446.57Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        M++DSI NAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+ A+ NK   EE      +  +  +  +L     N+    +E++   H H  F
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCS--ESSPRGNVVSQLDSCGD
         +S SNSP    +SIL G +S P+F+ SSS     S S G  SG+ITEEE+ +  DD CLDDWEAIADALAA D++H++ +  ES      + Q    G 
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCS--ESSPRGNVVSQLDSCGD

Query:  SRNELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLC
        +  ++ + D  +  QR     R   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDS+FLPC CGFRLC
Subjt:  SRNELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISR
        LFCHK I + DGRCPGCRKPY+ +    E +V GG  T  LARS SM  R
Subjt:  LFCHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISR

AT5G62910.1 RING/U-box superfamily protein3.7e-6645.81Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF
        M+TDSI NAS + AP  RD    KK+  +++K+KQ+KL +RREQWLS+ AV NK+  EE +       ++++  + SS K+  RE       ++ HH  F
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDF

Query:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDK----------QHDQCSESSPRGNVV
         +SPSNS        +GG  S  +F+G SS SS  SSSSG  SG+ITEEE  ++ DD C+DDWEA+ADALAA ++            +Q S      NV 
Subjt:  SDSPSNSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDK----------QHDQCSESSPRGNVV

Query:  SQLDSCGDSRNELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLP
            S  D+ + +GVED     +  R++ R   + RAWR DD  RPQ LP L+KQLS P  D+RF            +++P+SCPIC+EDLDLTDS+FLP
Subjt:  SQLDSCGDSRNELGVEDGDSGVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLP

Query:  CFCGFRLCLFCHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISR
        C CGFRLCLFCHK I + DGRCPGCRKPY+ +    ET++ GG  T  LARS SM  +
Subjt:  CFCGFRLCLFCHKRILEEDGRCPGCRKPYDHDPADNETNVHGGSPTFPLARSCSMISR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTTTGGCCCCAAACGCCAGGGATTTGCCCCTGCCCAAGAAGAAGAGGGTTAGGAATTCCAAATTGAAGCAG
TCCAAGCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTCAAGAACAAAAAATGGAACGAAGAGGACAATCGGCTTGATTCAGTGGCCATTAAAGCG
AGGGAAGATGATAACCTTTCCTCCAAAAAAATAAATATGAGGGAAATAGGAGAAGAGAACGATGGATCGGTTCACCACCATAGCGATTTTTCGGACTCACCGTCT
AATAGTCCTCCTAGTATTGGCAGTAGTATCTTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGTAGCAGCTCTAGTGGT
TGTCGCTCGGGGAGTATAACGGAGGAGGAAGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAG
CAACATGATCAATGTTCCGAGTCTTCCCCTAGAGGCAATGTCGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTAGGCGTAGAAGATGGTGACTCG
GGTGTTCAGCGTGGGAGAATTGCGCAGAGGGCTTCGATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAA
CTTAGTTTACCAAATACAGACCGGCGTTTTGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGGGTTATGTCTGTGCCTACATCTTGTCCCATTTGCTTTGAAGAC
TTAGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTGGATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGCTGC
AGGAAGCCATATGATCATGATCCTGCCGACAATGAGACAAACGTACATGGCGGCAGCCCAACGTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
GTTTTTTTCCTAGTCTGTGGAAAAGAGCGAGCGAAGCAGAGGAGTTTCCGTTATCCATTCTCTCTCTCTCTTTCTCTCCCCCGAAGATCTTCTCTCTCCCGGAAA
AAATATCCACACAAATTAGGGTTTCTTTGTGACCTTCGTTCCTTCAATTCGATTTCAACTCTTCAATCATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTT
TGGCCCCAAACGCCAGGGATTTGCCCCTGCCCAAGAAGAAGAGGGTTAGGAATTCCAAATTGAAGCAGTCCAAGCTTGACGTTCGTCGGGAACAATGGCTTTCTC
GAGGTGCTGTCAAGAACAAAAAATGGAACGAAGAGGACAATCGGCTTGATTCAGTGGCCATTAAAGCGAGGGAAGATGATAACCTTTCCTCCAAAAAAATAAATA
TGAGGGAAATAGGAGAAGAGAACGATGGATCGGTTCACCACCATAGCGATTTTTCGGACTCACCGTCTAATAGTCCTCCTAGTATTGGCAGTAGTATCTTGGGTG
GAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGTAGCAGCTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAAGAAGAAG
AAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAACATGATCAATGTTCCGAGTCTTCCCCTAGAGGCA
ATGTCGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTAGGCGTAGAAGATGGTGACTCGGGTGTTCAGCGTGGGAGAATTGCGCAGAGGGCTTCGA
TGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAACTTAGTTTACCAAATACAGACCGGCGTTTTGGATGTG
GAGGCATCCCTTGGGCCTGTGGTGGGGTTATGTCTGTGCCTACATCTTGTCCCATTTGCTTTGAAGACTTAGACCTTACAGACTCAAGTTTTTTACCTTGTTTCT
GTGGATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGCTGCAGGAAGCCATATGATCATGATCCTGCCGACAATGAGA
CAAACGTACATGGCGGCAGCCCAACGTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAGGTAGTGTTCAGTTTCTGTGAGTTAATGTACGTCTGGT
CTCACTTTTTTTTTCTTTTCTTTTTTGTTCCTGCGTCTCTTGGGTATTATGGTAGTCTTGGGCTCTGATTTTCATAGTAATAGAAGTGGCATTCGGGTGTTGAAG
TATGGTTATGAGATTGAGAACCTTTAAACTGAACTGTTTCGTACATGAGTGTGGTTCTTATCTTATCGTACATTTGCCAATGTAGAGGACTTATTTCGTACTTAA
TATGTGAATAGACGAGGTGGTATAGAAATGAATACATGGAATAATGATATAACATTTGTTTTCTCC
Protein sequenceShow/hide protein sequence
MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEEDNRLDSVAIKAREDDNLSSKKINMREIGEENDGSVHHHSDFSDSPS
NSPPSIGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSRNELGVEDGDS
GVQRGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGC
RKPYDHDPADNETNVHGGSPTFPLARSCSMISRS