CuGenDBv2

Gene ID	CcUC06G127700
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein PLASTID TRANSCRIPTIONALLY ACTIVE 10
Genome location	CicolChr06:29806316..29812989
RNA-Seq Expression	CcUC06G127700
Synteny	CcUC06G127700
Gene Ontology terms	GO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR044967 - Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8652384.1 hypothetical protein Csa_013931 [Cucumis sativus]

0.0e+00

90.24

Show/hide

Query:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA
        MQTLLNPSHFF FP LPTSRNSNSPHS FQWRPLLCPPLT PGNFS+KCFSSDEFPVDESFLE FGPKD+ETED+ARKRNWVERGWAPWEEVFTPEADFA
Subjt:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA

Query:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV
        RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGW+VDR+ELEFIR AHKLQAV
Subjt:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV

Query:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC--------
        RVDLDRLEKDVRT TEDLCLDRYK+FLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ         H Y           
Subjt:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC--------

Query:  -RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS
          WVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDED NPDEVRRDCGRPPIPRKDPGIKPEDE LLS
Subjt:  -RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS

Query:  NHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYK
        NHPYV+KLWQIHVAEQMILDD E+NPDKYRDKKLSELSDEEDFDEEN+IE+TKVRYKNSLLPKKILKTSVKELDLEAA SERQVHNKLRQEAQ+RGE+YK
Subjt:  NHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYK

Query:  ITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW
        ITKLRRN+EMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDA+YFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW
Subjt:  ITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW

Query:  YEMSYEDAIKERMEREARSKVAKEDDIDQDEDDEDDDDEEFDFSILRD-SVDEFSAQPHVNGTESSRMLDEGMFED
        YEMSYEDAIKE+MEREA  KVA+EDD D+D    DDDD++FDFSIL+D SVDEF  QPHVNGTESSR+ DEGMFED
Subjt:  YEMSYEDAIKERMEREARSKVAKEDDIDQDEDDEDDDDEEFDFSILRD-SVDEFSAQPHVNGTESSRMLDEGMFED

XP_004138063.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 [Cucumis sativus]

0.0e+00

90.24

Show/hide

Query:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA
        MQTLLNPSHFF FP LPTSRNSNSPHS FQWRPLLCPPLT PGNFS+KCFSSDEFPVDESFLE FGPKD+ETED+ARKRNWVERGWAPWEEVFTPEADFA
Subjt:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA

Query:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV
        RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGW+VDR+ELEFIR AHKLQAV
Subjt:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV

Query:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC--------
        RVDLDRLEKDVRT TEDLCLDRYK+FLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ         H Y           
Subjt:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC--------

Query:  -RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS
          WVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDED NPDEVRRDCGRPPIPRKDPGIKPEDE LLS
Subjt:  -RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS

Query:  NHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYK
        NHPYV+KLWQIHVAEQMILDD E+NPDKYRDKKLSELSDEEDFDEEN+IE+TKVRYKNSLLPKKILKTSVKELDLEAA SERQVHNKLRQEAQ+RGE+YK
Subjt:  NHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYK

Query:  ITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW
        ITKLRRN+EMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDA+YFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW
Subjt:  ITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW

Query:  YEMSYEDAIKERMEREARSKVAKEDDIDQDEDDEDDDDEEFDFSILRD-SVDEFSAQPHVNGTESSRMLDEGMFED
        YEMSYEDAIKE+MEREA  KVA+EDD D+D    DDDD++FDFSIL+D SVDEF  QPHVNGTESSR+ DEGMFED
Subjt:  YEMSYEDAIKERMEREARSKVAKEDDIDQDEDDEDDDDEEFDFSILRD-SVDEFSAQPHVNGTESSRMLDEGMFED

XP_016903198.1 PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 isoform X2 [Cucumis melo]

0.0e+00

91.79

Show/hide

Query:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA
        MQTLLNPSHFF FP LPTSRNSNS HS FQWRPLLCPPLT PGNFS+KCFSSDEFPVDESFLE FGPKD+ETEDEARKRNWVERGWAPWEEVFTPEADFA
Subjt:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA

Query:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV
        RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYR QCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGW+VDR+ELEFIR AHKLQA+
Subjt:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV

Query:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQAHTYDDCRWVPIKGNDWYWIRHH
        RVDLDRLEKDVRT TE+LCLDRYK+FLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQAH Y++CRWVPIKGNDWYWIRHH
Subjt:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQAHTYDDCRWVPIKGNDWYWIRHH

Query:  IKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLSNHPYVDKLWQIHVAEQM
        IKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDED NPDEVRRDCGRPPIPRKDPGIKPEDE+LLSNHPYV+KLWQIHVAEQM
Subjt:  IKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLSNHPYVDKLWQIHVAEQM

Query:  ILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYKITKLRRNIEMDEYDLMH
        ILDD E+NPDKY DKKLSELSDEEDFDEENNIE+TKVRYKNSLLPKKILKTSVKELDL AA SERQ HNKLRQEAQ RGEEYKI KLRRN+EMDEYDLMH
Subjt:  ILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYKITKLRRNIEMDEYDLMH

Query:  WRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVWYEMSYEDAIKERMEREA
        WRRSFEEREALIRDISCRQALGLPLEEPGRYVDA+YFG+DQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVWYEMSYEDAIK +MEREA
Subjt:  WRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVWYEMSYEDAIKERMEREA

Query:  RSKVAKEDDIDQDEDDEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED
          K+A+ED    D D+EDDDD++FDFSIL+DSVD+F  QPHVNGTESSR+ DEGMFED
Subjt:  RSKVAKEDDIDQDEDDEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED

XP_022134728.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 [Momordica charantia]

0.0e+00

88.58

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Query:  NQMQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEAD
        NQMQTLLNPSHFF FPKL  SRNSNSPHS FQWRPLL PP+ F GNF++KCFSSDEFPVDESFLENFGPKDKETEDEAR RNW+ERGWAPWEEVFTPEAD
Subjt:  NQMQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEAD

Query:  FARKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQ
        FARKSLNEGEEVPLQTPEAIEAFKMLSPKYRK KMEEMGLTEDDYYR QCEIKG+IPEPLETTWTRPLVLQVVPPRDWPPRGW+VDRKELEFIR AHKLQ
Subjt:  FARKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQ

Query:  AVRVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC------
        AVRVDLDRLEKDV+T TED+CLDRYK+FLKQYKEWVAANKDRLEEES+KYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ         H Y         
Subjt:  AVRVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC------

Query:  ---RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEAL
            WVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEAL
Subjt:  ---RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEAL

Query:  LSNHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEE
        LSNHPYVDKLWQIHVAEQMI+DD+E+NPDKY+DKKLSELSDEEDFDEEN++E+TKVRYKNSLLPK I+KTSVKELDLEAAFSERQVHN+LRQEA  RGE+
Subjt:  LSNHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEE

Query:  YKITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGV
        YKI+KL+RNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDA+YFGKDQYDP+NPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKG 
Subjt:  YKITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGV

Query:  VWYEMSYEDAIKERMEREARSKVAKE-DDIDQDED-----DEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED
        VWYEMSYEDAIKERMEREARSK AKE D+ DQDED     +EDDDD++FDFSILRDSVD+FS QPHVNGTESSRM DEGMFED
Subjt:  VWYEMSYEDAIKERMEREARSKVAKE-DDIDQDED-----DEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED

XP_038879438.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 [Benincasa hispida]

0.0e+00

91.72

Show/hide

Query:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA
        MQTLLNPSHFF FP LP SRNSNS HSCFQWRPLLCPPLTF G FSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA
Subjt:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA

Query:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV
        RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYR+QCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGW+VDR+E+EFIR AHKLQ+V
Subjt:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV

Query:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC--------
        RVDLDRLEKDVRT T+DLCLDRYK+FLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ         H Y           
Subjt:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC--------

Query:  -RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS
          WVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS
Subjt:  -RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS

Query:  NHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYK
        NHPYVDKLWQIHVAEQMILDD+E+NPDKYR+KKLSELSDEEDFDEEN+IE+TKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQ RGEEYK
Subjt:  NHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYK

Query:  ITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW
        I KLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDA+YFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW
Subjt:  ITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW

Query:  YEMSYEDAIKERMEREARSKVAKEDDIDQDEDDE-DDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED
        YE+SYEDAIKERMEREARS VAKEDDIDQDED+E DDDD++FDFSIL DSVDEFS+QPHVNGTESSR+ DEGMFED
Subjt:  YEMSYEDAIKERMEREARSKVAKEDDIDQDEDDE-DDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNR3 S1 motif domain-containing protein

0.0e+00

90.24

Show/hide

Query:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA
        MQTLLNPSHFF FP LPTSRNSNSPHS FQWRPLLCPPLT PGNFS+KCFSSDEFPVDESFLE FGPKD+ETED+ARKRNWVERGWAPWEEVFTPEADFA
Subjt:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA

Query:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV
        RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGW+VDR+ELEFIR AHKLQAV
Subjt:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV

Query:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC--------
        RVDLDRLEKDVRT TEDLCLDRYK+FLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ         H Y           
Subjt:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC--------

Query:  -RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS
          WVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDED NPDEVRRDCGRPPIPRKDPGIKPEDE LLS
Subjt:  -RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS

Query:  NHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYK
        NHPYV+KLWQIHVAEQMILDD E+NPDKYRDKKLSELSDEEDFDEEN+IE+TKVRYKNSLLPKKILKTSVKELDLEAA SERQVHNKLRQEAQ+RGE+YK
Subjt:  NHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYK

Query:  ITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW
        ITKLRRN+EMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDA+YFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW
Subjt:  ITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW

Query:  YEMSYEDAIKERMEREARSKVAKEDDIDQDEDDEDDDDEEFDFSILRD-SVDEFSAQPHVNGTESSRMLDEGMFED
        YEMSYEDAIKE+MEREA  KVA+EDD D+D    DDDD++FDFSIL+D SVDEF  QPHVNGTESSR+ DEGMFED
Subjt:  YEMSYEDAIKERMEREARSKVAKEDDIDQDEDDEDDDDEEFDFSILRD-SVDEFSAQPHVNGTESSRMLDEGMFED

A0A1S4E4N9 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 isoform X2

0.0e+00

91.79

Show/hide

Query:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA
        MQTLLNPSHFF FP LPTSRNSNS HS FQWRPLLCPPLT PGNFS+KCFSSDEFPVDESFLE FGPKD+ETEDEARKRNWVERGWAPWEEVFTPEADFA
Subjt:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA

Query:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV
        RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYR QCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGW+VDR+ELEFIR AHKLQA+
Subjt:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV

Query:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQAHTYDDCRWVPIKGNDWYWIRHH
        RVDLDRLEKDVRT TE+LCLDRYK+FLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQAH Y++CRWVPIKGNDWYWIRHH
Subjt:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQAHTYDDCRWVPIKGNDWYWIRHH

Query:  IKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLSNHPYVDKLWQIHVAEQM
        IKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDED NPDEVRRDCGRPPIPRKDPGIKPEDE+LLSNHPYV+KLWQIHVAEQM
Subjt:  IKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLSNHPYVDKLWQIHVAEQM

Query:  ILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYKITKLRRNIEMDEYDLMH
        ILDD E+NPDKY DKKLSELSDEEDFDEENNIE+TKVRYKNSLLPKKILKTSVKELDL AA SERQ HNKLRQEAQ RGEEYKI KLRRN+EMDEYDLMH
Subjt:  ILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYKITKLRRNIEMDEYDLMH

Query:  WRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVWYEMSYEDAIKERMEREA
        WRRSFEEREALIRDISCRQALGLPLEEPGRYVDA+YFG+DQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVWYEMSYEDAIK +MEREA
Subjt:  WRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVWYEMSYEDAIKERMEREA

Query:  RSKVAKEDDIDQDEDDEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED
          K+A+ED    D D+EDDDD++FDFSIL+DSVD+F  QPHVNGTESSR+ DEGMFED
Subjt:  RSKVAKEDDIDQDEDDEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED

A0A5D3BH68 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 isoform X1

0.0e+00

89.04

Show/hide

Query:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA
        MQTLLNPSHFF FP LPTSRNSNS HS FQWRPLLCPPLT PGNFS+KCFSSDEFPVDESFLE FGPKD+ETEDEARKRNWVERGWAPWEEVFTPEADFA
Subjt:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA

Query:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV
        RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYR QCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGW+VDR+ELEFIR AHKLQA+
Subjt:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV

Query:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC--------
        RVDLDRLEKDVRT TE+LCLDRYK+FLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ         H Y           
Subjt:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC--------

Query:  -RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS
          WVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDED NPDEVRRDCGRPPIPRKDPGIKPEDE+LLS
Subjt:  -RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS

Query:  NHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYK
        NHPYV+KLWQIHVAEQMILDD E+NPDKY DKKLSELSDEEDFDEENNIE+TKVRYKNSLLPKKILKTSVKELDL AA SERQ HNKLRQEAQ RGEEYK
Subjt:  NHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYK

Query:  ITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW
        I KLRRN+EMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDA+YFG+DQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW
Subjt:  ITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW

Query:  YEMSYEDAIKERMEREARSKVAKEDDIDQDEDDEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED
        YEMSYEDAIK +MEREA  K+A+ED    D D+EDDDD++FDFSIL+DSVD+F  QPHVNGTESSR+ DEGMFED
Subjt:  YEMSYEDAIKERMEREARSKVAKEDDIDQDEDDEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED

A0A6J1C2U3 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10

0.0e+00

88.58

Show/hide

Query:  NQMQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEAD
        NQMQTLLNPSHFF FPKL  SRNSNSPHS FQWRPLL PP+ F GNF++KCFSSDEFPVDESFLENFGPKDKETEDEAR RNW+ERGWAPWEEVFTPEAD
Subjt:  NQMQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEAD

Query:  FARKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQ
        FARKSLNEGEEVPLQTPEAIEAFKMLSPKYRK KMEEMGLTEDDYYR QCEIKG+IPEPLETTWTRPLVLQVVPPRDWPPRGW+VDRKELEFIR AHKLQ
Subjt:  FARKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQ

Query:  AVRVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC------
        AVRVDLDRLEKDV+T TED+CLDRYK+FLKQYKEWVAANKDRLEEES+KYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ         H Y         
Subjt:  AVRVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC------

Query:  ---RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEAL
            WVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEAL
Subjt:  ---RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEAL

Query:  LSNHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEE
        LSNHPYVDKLWQIHVAEQMI+DD+E+NPDKY+DKKLSELSDEEDFDEEN++E+TKVRYKNSLLPK I+KTSVKELDLEAAFSERQVHN+LRQEA  RGE+
Subjt:  LSNHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEE

Query:  YKITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGV
        YKI+KL+RNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDA+YFGKDQYDP+NPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKG 
Subjt:  YKITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGV

Query:  VWYEMSYEDAIKERMEREARSKVAKE-DDIDQDED-----DEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED
        VWYEMSYEDAIKERMEREARSK AKE D+ DQDED     +EDDDD++FDFSILRDSVD+FS QPHVNGTESSRM DEGMFED
Subjt:  VWYEMSYEDAIKERMEREARSKVAKE-DDIDQDED-----DEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED

A0A6J1JH69 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10

0.0e+00

89.04

Show/hide

Query:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA
        MQTLLNPSHFF FPKL +S +SNSP +CFQWRPLLCPPL FPG+FS+KCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA
Subjt:  MQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFA

Query:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV
        RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTE DYYR QCE KGEIPEPLETTWTRPLVLQVVPPRDWPPRGW VDR+ELEFIR AHKLQAV
Subjt:  RKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAV

Query:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC--------
        RVDLDRLE DV+T T D+CLDRYK+FLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ         H Y           
Subjt:  RVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQ--------AHTYDDC--------

Query:  -RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS
          WVPIKGNDWYWIRHHIKVGMPV+VEILAKRDPYRFRFPIEMRF+HPNIDHL+FNRFDYPPIFHRD+DSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS
Subjt:  -RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLS

Query:  NHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYK
        NHPYVDKLWQ+HVAEQMILDDLE+NPDKY+DKKLSELSDEEDFDEENN+E+TKVRYKNSLLPK ILKTSVKELDLEAAFSERQVHNKLRQEAQ RGEEYK
Subjt:  NHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYK

Query:  ITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW
        ITKLRRN+EMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYV+A+YFGKDQYDP+NPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKG VW
Subjt:  ITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVW

Query:  YEMSYEDAIKERMEREARSKVAKEDDIDQDEDDEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED
        YEMSYEDAIK +MEREARSKV +EDD DQDE DEDDDD++FDFSILRD +DE S QPHVNGTESSRM DEGMFED
Subjt:  YEMSYEDAIKERMEREARSKVAKEDDIDQDEDDEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED

SwissProt top hits

e value

%identity

Alignment

F4JF21 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10

1.7e-259

67.8

Show/hide

Query:  QTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSL---KCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEAD
        QT LN    F FP  PT+ N   P    QW P        P   SL   + FSSDEFPVDE+FLE FGPKDK+TEDEAR+RNW+ERGWAPWEE+ TPEAD
Subjt:  QTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSL---KCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEAD

Query:  FARKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQ
        FARKSLNEGEEVPLQ+PEAIEAFKML P YRK+K++EMG+TED++Y  Q EI+G+ P PLET+W  P+VL+ +PPRDWPPRGW VDRKELEFIR AHKL 
Subjt:  FARKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQ

Query:  AVRVDLDRLEKDVR----TVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQA--------HTYDDC--
        A RV L+ L+KD+R       + +CL+R+K+FLKQYKEWV  NKDRLEEESYK DQD++PGRRKRGKDY++GMYELPFYYPG          H Y     
Subjt:  AVRVDLDRLEKDVR----TVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQA--------HTYDDC--

Query:  -------RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPE
                WVPIKGNDW+WIRH IKVGM VIVEI AKRDPYRFRFP+E+RFVHPNIDH+IFN+FD+PPIFHRD D+NPDE+RRDCGRPP PRKDPG KPE
Subjt:  -------RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPE

Query:  DEALLSNHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQD
        +E LLS+HPYVDKLWQIHVAEQMIL D E NP KY  KKLSELSD+EDFDE+ +IE+ +  YK + LPK ILKTSVKELDLEAA +ERQ HNKL  EA+ 
Subjt:  DEALLSNHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQD

Query:  RGEEYKITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIV
        RGE YKI KLRRNIEMDEYD +HWRRS EEREAL+RDIS RQALGLPLEEPGRY   ++FGKDQYDP++ LY+YDYWGEPKNSE SKQERM DAHNKSIV
Subjt:  RGEEYKITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIV

Query:  GKGVVWYEMSYEDAIKERME--REARSKVAKEDDIDQDEDDEDDDD-EEFDFSILRD--SVDEFSAQPHVNGTE
        GKG VWY+MSY+DAIK+ +E  +E  +  ++E++ + +E++EDDDD ++FD+SIL D  S+     QP VNGT+
Subjt:  GKGVVWYEMSYEDAIKERME--REARSKVAKEDDIDQDEDDEDDDD-EEFDFSILRD--SVDEFSAQPHVNGTE

Arabidopsis top hits

e value

%identity

Alignment

AT3G48500.1 Nucleic acid-binding, OB-fold-like protein

1.2e-260

67.8

Show/hide

Query:  QTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSL---KCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEAD
        QT LN    F FP  PT+ N   P    QW P        P   SL   + FSSDEFPVDE+FLE FGPKDK+TEDEAR+RNW+ERGWAPWEE+ TPEAD
Subjt:  QTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSL---KCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEAD

Query:  FARKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQ
        FARKSLNEGEEVPLQ+PEAIEAFKML P YRK+K++EMG+TED++Y  Q EI+G+ P PLET+W  P+VL+ +PPRDWPPRGW VDRKELEFIR AHKL 
Subjt:  FARKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQ

Query:  AVRVDLDRLEKDVR----TVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQA--------HTYDDC--
        A RV L+ L+KD+R       + +CL+R+K+FLKQYKEWV  NKDRLEEESYK DQD++PGRRKRGKDY++GMYELPFYYPG          H Y     
Subjt:  AVRVDLDRLEKDVR----TVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQA--------HTYDDC--

Query:  -------RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPE
                WVPIKGNDW+WIRH IKVGM VIVEI AKRDPYRFRFP+E+RFVHPNIDH+IFN+FD+PPIFHRD D+NPDE+RRDCGRPP PRKDPG KPE
Subjt:  -------RWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIPRKDPGIKPE

Query:  DEALLSNHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQD
        +E LLS+HPYVDKLWQIHVAEQMIL D E NP KY  KKLSELSD+EDFDE+ +IE+ +  YK + LPK ILKTSVKELDLEAA +ERQ HNKL  EA+ 
Subjt:  DEALLSNHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQEAQD

Query:  RGEEYKITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIV
        RGE YKI KLRRNIEMDEYD +HWRRS EEREAL+RDIS RQALGLPLEEPGRY   ++FGKDQYDP++ LY+YDYWGEPKNSE SKQERM DAHNKSIV
Subjt:  RGEEYKITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIV

Query:  GKGVVWYEMSYEDAIKERME--REARSKVAKEDDIDQDEDDEDDDD-EEFDFSILRD--SVDEFSAQPHVNGTE
        GKG VWY+MSY+DAIK+ +E  +E  +  ++E++ + +E++EDDDD ++FD+SIL D  S+     QP VNGT+
Subjt:  GKGVVWYEMSYEDAIKERME--REARSKVAKEDDIDQDEDDEDDDD-EEFDFSILRD--SVDEFSAQPHVNGTE

AT3G48500.2 Nucleic acid-binding, OB-fold-like protein

5.1e-256

65.01

Show/hide

Query:  QTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSL---KCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEAD
        QT LN    F FP  PT+ N   P    QW P        P   SL   + FSSDEFPVDE+FLE FGPKDK+TEDEAR+RNW+ERGWAPWEE+ TPEAD
Subjt:  QTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSL---KCFSSDEFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEAD

Query:  FARKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQ
        FARKSLNEGEEVPLQ+PEAIEAFKML P YRK+K++EMG+TED++Y  Q EI+G+ P PLET+W  P+VL+ +PPRDWPPRGW VDRKELEFIR AHKL 
Subjt:  FARKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPLETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQ

Query:  AVRVDLDRLEKDVR----TVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQA--------HTYDDC--
        A RV L+ L+KD+R       + +CL+R+K+FLKQYKEWV  NKDRLEEESYK DQD++PGRRKRGKDY++GMYELPFYYPG          H Y     
Subjt:  AVRVDLDRLEKDVR----TVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDYKEGMYELPFYYPGQA--------HTYDDC--

Query:  -------RWVPIKGNDWYWIRHHIKVGMPVIVEIL-----------------------------AKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFH
                WVPIKGNDW+WIRH IKVGM VIVEI                              AKRDPYRFRFP+E+RFVHPNIDH+IFN+FD+PPIFH
Subjt:  -------RWVPIKGNDWYWIRHHIKVGMPVIVEIL-----------------------------AKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFH

Query:  RDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLSNHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKI
        RD D+NPDE+RRDCGRPP PRKDPG KPE+E LLS+HPYVDKLWQIHVAEQMIL D E NP KY  KKLSELSD+EDFDE+ +IE+ +  YK + LPK I
Subjt:  RDEDSNPDEVRRDCGRPPIPRKDPGIKPEDEALLSNHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKI

Query:  LKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYKITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPL
        LKTSVKELDLEAA +ERQ HNKL  EA+ RGE YKI KLRRNIEMDEYD +HWRRS EEREAL+RDIS RQALGLPLEEPGRY   ++FGKDQYDP++ L
Subjt:  LKTSVKELDLEAAFSERQVHNKLRQEAQDRGEEYKITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPL

Query:  YRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVWYEMSYEDAIKERME--REARSKVAKEDDIDQDEDDEDDDD-EEFDFSILRD--SVDEFSAQPHVN
        Y+YDYWGEPKNSE SKQERM DAHNKSIVGKG VWY+MSY+DAIK+ +E  +E  +  ++E++ + +E++EDDDD ++FD+SIL D  S+     QP VN
Subjt:  YRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGVVWYEMSYEDAIKERME--REARSKVAKEDDIDQDEDDEDDDD-EEFDFSILRD--SVDEFSAQPHVN

Query:  GTE
        GT+
Subjt:  GTE

Sequences

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CDS sequence

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ATGGAGGGTGAAATCCACGTCCACAACCGAGCTCACGTAATATCGAAACATTGGATAACTCCCAACTTTTTAATACAAAACTTCATCCATTCCTATCATGGAAAA
TTATCTCGTTCCCGCTGCAAGCTCACTACAATCTTTTCTGTTACAAACCAAATGCAAACCCTCTTAAACCCTTCTCATTTCTTCAACTTCCCCAAACTCCCAACC
TCTCGGAACTCCAATTCTCCTCATTCTTGCTTTCAATGGCGTCCTCTCCTCTGTCCACCGCTTACTTTTCCCGGCAACTTCAGTTTAAAGTGCTTCAGCTCAGAC
GAGTTCCCTGTGGACGAGTCCTTCCTCGAGAATTTTGGTCCGAAAGACAAGGAAACAGAGGACGAAGCTCGCAAGCGTAATTGGGTTGAGCGTGGTTGGGCTCCC
TGGGAAGAAGTCTTCACACCAGAAGCTGATTTTGCGCGGAAGAGTTTGAATGAAGGCGAGGAAGTGCCGCTTCAGACGCCTGAGGCGATTGAAGCCTTCAAAATG
TTGAGCCCGAAGTACCGGAAGCAGAAGATGGAGGAAATGGGGTTGACGGAGGATGACTATTACCGCACGCAATGCGAAATTAAAGGCGAGATACCGGAGCCTCTT
GAGACGACGTGGACTAGGCCGCTGGTCCTTCAAGTCGTTCCTCCACGGGACTGGCCTCCGAGGGGTTGGAACGTTGATAGAAAAGAGCTGGAATTTATTAGGGCA
GCGCACAAATTGCAAGCTGTGAGGGTGGACTTGGATCGGCTTGAGAAAGATGTGAGGACGGTTACTGAAGATTTGTGTTTGGACAGATACAAAATGTTTTTGAAA
CAGTACAAGGAGTGGGTTGCTGCGAATAAAGATAGATTGGAGGAGGAGTCCTACAAGTACGACCAAGATTATCATCCTGGTAGGAGGAAAAGAGGGAAGGACTAT
AAAGAAGGCATGTATGAGCTTCCGTTTTATTATCCAGGACAAGCTCATACGTACGATGATTGCAGGTGGGTTCCCATAAAAGGTAATGATTGGTATTGGATTCGC
CATCACATAAAAGTTGGTATGCCTGTGATCGTAGAGATTCTGGCAAAGCGAGATCCCTATCGGTTTCGATTTCCTATTGAAATGCGTTTTGTTCATCCTAATATA
GATCACCTAATATTTAATAGATTTGACTACCCACCGATATTCCACCGCGATGAGGACAGTAATCCAGATGAAGTGCGGCGTGATTGTGGAAGACCTCCTATTCCT
AGAAAAGATCCGGGAATTAAACCAGAAGATGAAGCGCTATTGTCAAATCATCCATATGTTGATAAGCTGTGGCAGATACATGTTGCGGAACAAATGATTTTGGAT
GATCTGGAGCTGAATCCTGATAAGTATAGGGACAAAAAACTTTCAGAGTTATCTGATGAAGAAGATTTTGATGAAGAAAACAATATTGAACATACCAAAGTACGT
TATAAGAACAGCTTATTACCAAAGAAGATTCTGAAAACAAGTGTCAAAGAACTTGATTTGGAGGCAGCCTTTTCTGAGCGTCAAGTTCACAATAAACTAAGACAA
GAAGCACAGGATAGAGGAGAAGAGTACAAAATTACTAAATTGAGACGGAATATTGAAATGGATGAATATGACCTCATGCATTGGCGTAGATCTTTCGAGGAAAGA
GAAGCATTAATCAGAGATATTAGTTGCCGTCAAGCTCTTGGTCTCCCACTGGAAGAGCCTGGAAGATATGTAGATGCTACTTACTTCGGAAAAGATCAATATGAC
CCATCAAACCCTCTCTACCGTTATGACTACTGGGGTGAACCCAAGAATTCAGAGAAGAGCAAACAAGAACGGATGACAGATGCCCACAACAAATCTATAGTAGGC
AAAGGCGTTGTTTGGTATGAAATGTCATACGAGGATGCAATTAAGGAGAGGATGGAAAGAGAAGCTCGTTCAAAGGTTGCAAAAGAAGATGATATAGACCAAGAT
GAAGACGATGAGGATGACGACGACGAAGAATTTGATTTCAGTATTTTACGCGACTCAGTAGATGAATTCTCGGCCCAACCTCACGTGAATGGAACTGAATCGTCT
AGAATGTTGGATGAGGGTATGTTTGAGGATTAG

mRNA sequence

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Protein sequence

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MEGEIHVHNRAHVISKHWITPNFLIQNFIHSYHGKLSRSRCKLTTIFSVTNQMQTLLNPSHFFNFPKLPTSRNSNSPHSCFQWRPLLCPPLTFPGNFSLKCFSSD
EFPVDESFLENFGPKDKETEDEARKRNWVERGWAPWEEVFTPEADFARKSLNEGEEVPLQTPEAIEAFKMLSPKYRKQKMEEMGLTEDDYYRTQCEIKGEIPEPL
ETTWTRPLVLQVVPPRDWPPRGWNVDRKELEFIRAAHKLQAVRVDLDRLEKDVRTVTEDLCLDRYKMFLKQYKEWVAANKDRLEEESYKYDQDYHPGRRKRGKDY
KEGMYELPFYYPGQAHTYDDCRWVPIKGNDWYWIRHHIKVGMPVIVEILAKRDPYRFRFPIEMRFVHPNIDHLIFNRFDYPPIFHRDEDSNPDEVRRDCGRPPIP
RKDPGIKPEDEALLSNHPYVDKLWQIHVAEQMILDDLELNPDKYRDKKLSELSDEEDFDEENNIEHTKVRYKNSLLPKKILKTSVKELDLEAAFSERQVHNKLRQ
EAQDRGEEYKITKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRQALGLPLEEPGRYVDATYFGKDQYDPSNPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVG
KGVVWYEMSYEDAIKERMEREARSKVAKEDDIDQDEDDEDDDDEEFDFSILRDSVDEFSAQPHVNGTESSRMLDEGMFED

CcUC06G127700 (gene) of Watermelon (PI 537277) v1 genome