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CcUC07G134100 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC07G134100
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationCicolChr07:8222035..8223670
RNA-Seq ExpressionCcUC07G134100
SyntenyCcUC07G134100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A5A7TAA5 Uncharacterized protein9.4e-0443.24Show/hide
Query:  VEGPVTRGRRRD------------------DACLSSLEEGLDDVKLAICRLSERYEELLQESLEITE--KELNE
        +EGPVTRGR+                    D  L++LE+G++DV+LA+ RLSE +EEL+QE+ EIT   KE+ E
Subjt:  VEGPVTRGRRRD------------------DACLSSLEEGLDDVKLAICRLSERYEELLQESLEITE--KELNE

A0A5A7TFP3 Retrotrans_gag domain-containing protein7.2e-0443.24Show/hide
Query:  VEGPVTRGRRRD------------------DACLSSLEEGLDDVKLAICRLSERYEELLQESLEITE--KELNE
        +EGPVTRGR++                   D  L++LE+G++DV+LA+ RLSE +EEL+QE+ EIT   KE+ E
Subjt:  VEGPVTRGRRRD------------------DACLSSLEEGLDDVKLAICRLSERYEELLQESLEITE--KELNE

A0A5A7VEX8 Polyprotein9.4e-0443.24Show/hide
Query:  VEGPVTRGRRRD------------------DACLSSLEEGLDDVKLAICRLSERYEELLQESLEITE--KELNE
        +EGPVTRGR+                    D  L++LE+G++DV+LA+ RLSE +EEL+QE+ EIT   KE+ E
Subjt:  VEGPVTRGRRRD------------------DACLSSLEEGLDDVKLAICRLSERYEELLQESLEITE--KELNE

A0A5D3D3V4 Retrotrans_gag domain-containing protein7.2e-0443.24Show/hide
Query:  VEGPVTRGRRRD------------------DACLSSLEEGLDDVKLAICRLSERYEELLQESLEITE--KELNE
        +EGPVTRGR++                   D  L++LE+G++DV+LA+ RLSE +EEL+QE+ EIT   KE+ E
Subjt:  VEGPVTRGRRRD------------------DACLSSLEEGLDDVKLAICRLSERYEELLQESLEITE--KELNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGAGTGCAAGTTGAAGGACCAGTGACCCGAGGTAGGCGGCGAGATGATGCTTGTCTGTCGAGCTTAGAAGAAGGACTAGATGATGTGAAACTTGCCATTTGTCGG
TTGAGTGAAAGATATGAAGAGCTCCTCCAAGAAAGCTTGGAGATCACGGAGAAAGAGTTGAATGAGATGAAGGTAATGTCCGCACTCGCCAAAGTAAAGGGATCC
ATGAAAAGG
mRNA sequenceShow/hide mRNA sequence
CGAGTGCAAGTTGAAGGACCAGTGACCCGAGGTAGGCGGCGAGATGATGCTTGTCTGTCGAGCTTAGAAGAAGGACTAGATGATGTGAAACTTGCCATTTGTCGG
TTGAGTGAAAGATATGAAGAGCTCCTCCAAGAAAGCTTGGAGATCACGGAGAAAGAGTTGAATGAGATGAAGGTAATGTCCGCACTCGCCAAAGTAAAGGGATCC
ATGAAAAGG
Protein sequenceShow/hide protein sequence
RVQVEGPVTRGRRRDDACLSSLEEGLDDVKLAICRLSERYEELLQESLEITEKELNEMKVMSALAKVKGSMKR