; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC07G145100 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC07G145100
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionlate embryogenesis abundant protein At5g17165-like
Genome locationCicolChr07:31213604..31219022
RNA-Seq ExpressionCcUC07G145100
SyntenyCcUC07G145100
Gene Ontology termsNA
InterPro domainsIPR039291 - Late embryogenesis abundant protein At5g17165-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576842.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia]3.3e-5484.5Show/hide
Query:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA
        MAANSRSAGAIA L KRITDQIWN DPLRNS ISS+APKFRRAAHTS YDKN DEQVRPS+VPDDVIQ Q+ADKYWAPHPQTGVFGPAT NP AA  N  
Subjt:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA

Query:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHG
        A+G +YS VEEEKAWFRPTSLEDSEKPHG
Subjt:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHG

XP_004146886.1 late embryogenesis abundant protein At5g17165 [Cucumis sativus]2.3e-5586.47Show/hide
Query:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQ-AADKYWAPHPQTGVFGPATENPA--AAAG
        MAANSRS GAIA LGKRITDQIW  DPLRNSVISSSAPKFRRAAHTSVYDKN +EQVRPS+VPDDVIQ Q AAD YWAPHPQTGVFGPA++NPA  AAA 
Subjt:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQ-AADKYWAPHPQTGVFGPATENPA--AAAG

Query:  NRAADGVHYSGVEEEKAWFRPTSLEDSEKPHGL
        NRAADG +YS VEEEKAWFRPTSLEDSEKPHGL
Subjt:  NRAADGVHYSGVEEEKAWFRPTSLEDSEKPHGL

XP_008453829.1 PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo]2.5e-5486.36Show/hide
Query:  MAANSRSAGAIASLGKRITDQIW-NSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAA-AAGN
        MAANSRSAGAIA LGKRITDQIW +SD LRNSVISSSAPKFRRAAHTSVYDKN +EQVRPS+VPDDVIQ QAADKYWAPHPQTGVFGP ++NPAA AA N
Subjt:  MAANSRSAGAIASLGKRITDQIW-NSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAA-AAGN

Query:  RAADGVHYSGVEEEKAWFRPTSLEDSEKPHGL
        RAAD  +YS  EEEKAWFRPTSLEDSEKPHGL
Subjt:  RAADGVHYSGVEEEKAWFRPTSLEDSEKPHGL

XP_022984594.1 late embryogenesis abundant protein At5g17165-like [Cucurbita maxima]5.6e-5484.5Show/hide
Query:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA
        MAANSRSAGAIA L KRITDQIW  DPLRNS ISS+APKFRRAAHTS YDKN DEQVRPS+VPDDVIQ Q+ADKYWAPHPQTGVFGPAT NP AA  N  
Subjt:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA

Query:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHG
        ADG +YS VEEEKAWFRPTSLEDSEKPHG
Subjt:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHG

XP_038901450.1 late embryogenesis abundant protein At5g17165-like [Benincasa hispida]4.5e-5990Show/hide
Query:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA
        MAANSRSAG IA LGKRITDQIW SDPLRNSVISSSAPK RRAAHTS YDKN DEQVRPSVVPDDVIQ+QAADKYWAPHPQTGVFGPA++NPAAAA NRA
Subjt:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA

Query:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHGL
        ADG +YS VEEEKAWFRPTSLEDSEKPHGL
Subjt:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHGL

TrEMBL top hitse value%identityAlignment
A0A1S3BYE5 uncharacterized protein LOC1034944371.2e-5486.36Show/hide
Query:  MAANSRSAGAIASLGKRITDQIW-NSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAA-AAGN
        MAANSRSAGAIA LGKRITDQIW +SD LRNSVISSSAPKFRRAAHTSVYDKN +EQVRPS+VPDDVIQ QAADKYWAPHPQTGVFGP ++NPAA AA N
Subjt:  MAANSRSAGAIASLGKRITDQIW-NSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAA-AAGN

Query:  RAADGVHYSGVEEEKAWFRPTSLEDSEKPHGL
        RAAD  +YS  EEEKAWFRPTSLEDSEKPHGL
Subjt:  RAADGVHYSGVEEEKAWFRPTSLEDSEKPHGL

A0A6J1CHE9 late embryogenesis abundant protein At5g17165-like9.1e-5082.17Show/hide
Query:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA
        MAANSRSAGAIA LGKRIT+QIW SDPLRNS ISSSAPKFRRAAHTSVYDKN DEQ RPS+VPD+VIQ Q  DKYWAPHPQTGVFGP T++P AAA  +A
Subjt:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA

Query:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHG
        A+G  Y+ VEEEKAWFRPTSLEDSEKPHG
Subjt:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHG

A0A6J1E3E9 late embryogenesis abundant protein At5g17165-like3.0e-5382.95Show/hide
Query:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA
        MAANSRSAGAIA L KRITDQIWN DPLRNS ISS+APKFRRAAH+S YDKN DEQVRPS+VPDDVIQ Q+ADKYWAP+PQTGVFGPAT NP AA  N  
Subjt:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA

Query:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHG
        A+G +YS VEEEKAWFRPTSLEDSEKPHG
Subjt:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHG

A0A6J1FNH5 late embryogenesis abundant protein At5g17165-like isoform X15.9e-4979.07Show/hide
Query:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA
        MAANSRSAGAIA LGKRIT+QIW SD    S ISSSA KFRRAAHTS YDKN DEQVRPS+VPDDVIQ QAA+KYWAPHP TGVFGP  + P AAAG+RA
Subjt:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA

Query:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHG
        ADG +++  EEEKAWFRPTSLEDSEKPHG
Subjt:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHG

A0A6J1JAZ8 late embryogenesis abundant protein At5g17165-like2.7e-5484.5Show/hide
Query:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA
        MAANSRSAGAIA L KRITDQIW  DPLRNS ISS+APKFRRAAHTS YDKN DEQVRPS+VPDDVIQ Q+ADKYWAPHPQTGVFGPAT NP AA  N  
Subjt:  MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRA

Query:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHG
        ADG +YS VEEEKAWFRPTSLEDSEKPHG
Subjt:  ADGVHYSGVEEEKAWFRPTSLEDSEKPHG

SwissProt top hitse value%identityAlignment
F4KFM8 Late embryogenesis abundant protein At5g171654.7e-1955.17Show/hide
Query:  RAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRAADGVHYSGVEEEKAWFRPTSLEDSEKPH
        R  HTS YDKN++E+++PS VPD++I+   +DKYW+PHPQTGVFGP++ +  A    R   G     V EEKAWFRPTSLED +K H
Subjt:  RAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRAADGVHYSGVEEEKAWFRPTSLEDSEKPH

Arabidopsis top hitse value%identityAlignment
AT3G03150.1 unknown protein3.9e-2145.6Show/hide
Query:  SRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRAADGV
        S+S   I SL K +     N+     +  S+  P  RR+ H+S YDKN+++++  S VPD+VI+   +DKYW+PHP+TGVFGP+T   +A      A+G 
Subjt:  SRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRAADGV

Query:  HY-SGVEEEKAWFRPTSLEDSEKPH
        H  + V EE AWFRPTSLEDS+K H
Subjt:  HY-SGVEEEKAWFRPTSLEDSEKPH

AT5G17165.1 unknown protein3.3e-2055.17Show/hide
Query:  RAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRAADGVHYSGVEEEKAWFRPTSLEDSEKPH
        R  HTS YDKN++E+++PS VPD++I+   +DKYW+PHPQTGVFGP++ +  A    R   G     V EEKAWFRPTSLED +K H
Subjt:  RAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRAADGVHYSGVEEEKAWFRPTSLEDSEKPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCAGCTTGGGGAAACGAATCACTGACCAGATCTGGAACAGCGATCCACTTCGCAACTCTGTGATCTCTTCCTCTGC
TCCGAAGTTCAGGAGAGCAGCCCACACCTCAGTGTATGACAAGAACCTGGACGAGCAAGTTCGACCAAGTGTAGTCCCAGATGATGTGATTCAGGCTCAAGCTGCAGATA
AATACTGGGCTCCTCATCCACAAACCGGGGTGTTTGGGCCAGCTACTGAGAATCCTGCTGCAGCCGCAGGCAACCGTGCAGCAGATGGTGTCCATTACTCTGGTGTGGAG
GAGGAAAAGGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCAGCTTGGGGAAACGAATCACTGACCAGATCTGGAACAGCGATCCACTTCGCAACTCTGTGATCTCTTCCTCTGC
TCCGAAGTTCAGGAGAGCAGCCCACACCTCAGTGTATGACAAGAACCTGGACGAGCAAGTTCGACCAAGTGTAGTCCCAGATGATGTGATTCAGGCTCAAGCTGCAGATA
AATACTGGGCTCCTCATCCACAAACCGGGGTGTTTGGGCCAGCTACTGAGAATCCTGCTGCAGCCGCAGGCAACCGTGCAGCAGATGGTGTCCATTACTCTGGTGTGGAG
GAGGAAAAGGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTGTAG
Protein sequenceShow/hide protein sequence
MAANSRSAGAIASLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAAAAGNRAADGVHYSGVE
EEKAWFRPTSLEDSEKPHGL