CuGenDBv2

Gene ID	CcUC08G146200
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Mediator of RNA polymerase II transcription subunit 17
Genome location	CicolChr08:2133531..2145340
RNA-Seq Expression	CcUC08G146200
Synteny	CcUC08G146200
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR019313 - Mediator complex, subunit Med17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039269.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis melo var. makuwa]

0.0e+00

90.43

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYF+QSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  K+++TN SNQ+S+ REKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQ-VFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLE
        KETNSLLRQVHHAIF EQ VFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ CQTVEG N+ ILDNANLPFDSLDGIELPDRSDPLE
Subjt:  KETNSLLRQVHHAIFSEQ-VFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLE

Query:  KKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSME
        KKLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF ME
Subjt:  KKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSME

Query:  VPWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK
        VP SILHPNSIQAR SDS+QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIK
Subjt:  VPWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK

Query:  ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL
        ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLG+LSLEVLH T+MDLVSLCSGVGGSL
Subjt:  ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL

XP_008459609.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo]

0.0e+00

90.57

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYF+QSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  K+++TN SNQ+S+ REKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK
        KETNSLLRQVHHAIF EQVFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ CQTVEG N+ ILDNANLPFDSLDGIELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        P SILHPNSIQAR SDS+QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIKA
Subjt:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL
        NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLG+LSLEVLH T+MDLVSLCSGVGGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL

XP_011656092.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus]

0.0e+00

91.44

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYF+QSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+R K+ESTN SNQSS+NREKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK
        KETNSLLRQVHHAIFSEQVFDLVN+EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ  QTVEG N+ IL+NA+LPFDSLDGIELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        PWSILHPNSI+AR SD +QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+S NRY CDLADLPVIILLQVASQIILWLHEEAL WGIKA
Subjt:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL
        NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLGHLSLEVLH T+MDLVSLCSGVGGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL

XP_022987637.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]

0.0e+00

88.39

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MD DMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYF+QSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDN SCDPSSVFRPSSSTIRVD DSSGMLAI+LPPN+CHSL FGFLSGCN+ENPL+RGK+ESTNSSNQS +  EKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK
        KETNSLLRQVHHAIFSEQVFD VNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP+GQ CQTVE  NTGILDN NLPFDSLDGIELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPN+ TFEIYLQQIFHELVF+KSND+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        P S LHP SIQAR SDSH+MN+VTK+QF TKVVVNDDCITIEGEGAP+VVGLF GNSKD++SMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK 
Subjt:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL
        +RDFLSLSFELEQGETLRLVAHVDPED QGCLSWWLVMDDGLMEDRK NF+ SDVVPEYRKFLGHLSLEVL  T+MDLVSLCSG GGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL

XP_038889914.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida]

0.0e+00

91.29

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Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDEDMKVSLDKLPVKRLEAIEE GLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYF+QSAKGLERQ+AREARFYGALIRLQQNWKVKRQ
Subjt:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRV+HDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+RGK+ESTNSSNQSS+NREKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK
        KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSV ISLVPSGQ CQTVEG NTGILDNANLPFDSLDGIELPDRSDP EK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPNHITFEIYLQQIFHELVF++SNDRP S+LSRQSGQ +NDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        P SILHPNSIQA  SD+HQMNN+TK+QFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
Subjt:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL
        NRDFLSLSFELEQGE LRLVAHVDP+DPQGCLSWWLVMDDGLMED+KL+FDSSDV+PEYRKFLGHLSLEVLH T+MDLVSLCSGVG SL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXX2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

91.44

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYF+QSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+R K+ESTN SNQSS+NREKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK
        KETNSLLRQVHHAIFSEQVFDLVN+EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ  QTVEG N+ IL+NA+LPFDSLDGIELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        PWSILHPNSI+AR SD +QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+S NRY CDLADLPVIILLQVASQIILWLHEEAL WGIKA
Subjt:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL
        NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLGHLSLEVLH T+MDLVSLCSGVGGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL

A0A1S4E2I2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

90.57

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYF+QSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  K+++TN SNQ+S+ REKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK
        KETNSLLRQVHHAIF EQVFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ CQTVEG N+ ILDNANLPFDSLDGIELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        P SILHPNSIQAR SDS+QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIKA
Subjt:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL
        NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLG+LSLEVLH T+MDLVSLCSGVGGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL

A0A5A7TDC1 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

90.43

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYF+QSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  K+++TN SNQ+S+ REKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQ-VFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLE
        KETNSLLRQVHHAIF EQ VFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ CQTVEG N+ ILDNANLPFDSLDGIELPDRSDPLE
Subjt:  KETNSLLRQVHHAIFSEQ-VFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLE

Query:  KKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSME
        KKLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF ME
Subjt:  KKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSME

Query:  VPWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK
        VP SILHPNSIQAR SDS+QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIK
Subjt:  VPWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK

Query:  ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL
        ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLG+LSLEVLH T+MDLVSLCSGVGGSL
Subjt:  ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL

A0A5D3BMZ9 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

90.57

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MDED+KVSLDKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYF+QSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  K+++TN SNQ+S+ REKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK
        KETNSLLRQVHHAIF EQVFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPSGQ CQTVEG N+ ILDNANLPFDSLDGIELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPNHITFEIYLQQIFHELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        P SILHPNSIQAR SDS+QMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIKA
Subjt:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL
        NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYRKFLG+LSLEVLH T+MDLVSLCSGVGGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL

A0A6J1JAW7 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

88.39

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR
        MD DMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINT    
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKR

Query:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ
                               VEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYF+QSAKGLERQVAREARFYGALIRLQQNWKVKRQ
Subjt:  VSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQ

Query:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI
        RVAAPAPANEGFTIDLFDN SCDPSSVFRPSSSTIRVD DSSGMLAI+LPPN+CHSL FGFLSGCN+ENPL+RGK+ESTNSSNQS +  EKEFTNDDEYI
Subjt:  RVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYI

Query:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK
        KETNSLLRQVHHAIFSEQVFD VNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP+GQ CQTVE  NTGILDN NLPFDSLDGIELPDRSDPLEK
Subjt:  KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEK

Query:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV
        KLRNPN+ TFEIYLQQIFHELVF+KSND+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQLISHPTWNSRKSSWTF MEV
Subjt:  KLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEV

Query:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
        P S LHP SIQAR SDSH+MN+VTK+QF TKVVVNDDCITIEGEGAP+VVGLF GNSKD++SMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK 
Subjt:  PWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA

Query:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL
        +RDFLSLSFELEQGETLRLVAHVDPED QGCLSWWLVMDDGLMEDRK NF+ SDVVPEYRKFLGHLSLEVL  T+MDLVSLCSG GGSL
Subjt:  NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLCSGVGGSL

SwissProt top hits

e value

%identity

Alignment

F4K460 Mediator of RNA polymerase II transcription subunit 17

3.5e-206

55.83

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTAL
        MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+T  
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTAL

Query:  KRVSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVK
                                 V+ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YF+QSAK LE+++ REARFYGALIRLQ+NWKVK
Subjt:  KRVSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVK

Query:  RQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDD
        RQR+ A   +NEGFTIDL D+S  DP+S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++    + N  +  +   + + +      EK   +DD
Subjt:  RQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDD

Query:  EYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDP
        +Y+KET+SLLR+VH +IF+EQ+FD++NREAFN  +G N++G+REN++++SI QG S+F+SL PSG++    +       ++A L  +S   +E  +  D 
Subjt:  EYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDP

Query:  LEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF
          KKL  PN  ++EIYLQQIFHE  F K+ D+  S   R S Q   D  SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT 
Subjt:  LEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF

Query:  SMEVPWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTW
         M VP SI+     + ++ D  +     KTQF TKVVV DDCI++E E  PNVVGL   +S ++ S+N+Y CD+ADLPV+IL QVASQI+ WL EEA T 
Subjt:  SMEVPWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTW

Query:  GIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLC
        G KA+R+FLSLS E+ +GE + LVAHV+PED +GC+SWWLVM++G  E+R       + V E RK LGHLSL+VL+  +MDL++LC
Subjt:  GIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLC

Arabidopsis top hits

e value

%identity

Alignment

AT5G20170.1 RNA polymerase II transcription mediators

2.5e-207

55.83

Show/hide

Query:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTAL
        MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+T  
Subjt:  MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTAL

Query:  KRVSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVK
                                 V+ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YF+QSAK LE+++ REARFYGALIRLQ+NWKVK
Subjt:  KRVSQMPFIKGAFSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVK

Query:  RQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDD
        RQR+ A   +NEGFTIDL D+S  DP+S FRPS+ STIRVDHDS+GMLAIN+P +S +SLRFG++    + N  +  +   + + +      EK   +DD
Subjt:  RQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDD

Query:  EYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDP
        +Y+KET+SLLR+VH +IF+EQ+FD++NREAFN  +G N++G+REN++++SI QG S+F+SL PSG++    +       ++A L  +S   +E  +  D 
Subjt:  EYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDP

Query:  LEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF
          KKL  PN  ++EIYLQQIFHE  F K+ D+  S   R S Q   D  SGLL HFCLSL HR+F+N VL+ LE+VV KVP+L LISHPTWNSR SSWT 
Subjt:  LEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTF

Query:  SMEVPWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTW
         M VP SI+     + ++ D  +     KTQF TKVVV DDCI++E E  PNVVGL   +S ++ S+N+Y CD+ADLPV+IL QVASQI+ WL EEA T 
Subjt:  SMEVPWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTW

Query:  GIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLC
        G KA+R+FLSLS E+ +GE + LVAHV+PED +GC+SWWLVM++G  E+R       + V E RK LGHLSL+VL+  +MDL++LC
Subjt:  GIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHLTVMDLVSLC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGAAGACATGAAAGTCTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAGAACGGTCTAGAACGATTTCCATCAGATGTTGGTTATGAAGAGAA
ACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGC
AGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACCGCACTGAAGCGCGTATCTCAAATGCCCTTCATTAAGGGTGCC
TTTTCTGGATGTAACCAAGACATTTTTGAGCTTCTGAAGGTGGAAGCTAATGATGCAGTAACGGTAGCTGGGATGACAAGGCCAAAACCGTTACCTAATGAAGTTTTGTC
AGATCTTGGAGTGTCTGTCGCAACAAAATTACAGTGCTTTCGACATCTTGGTAAATATTTCAGGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGAT
TTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCA
TCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATTAATTTACCTCCAAATTCATGTCATTCCCT
TCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGATCGTGGTAAAAGTGAGTCTACAAATTCTTCCAATCAGTCTTCAATGAACAGGGAGAAGGAATTTA
CAAATGACGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCA
TCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTTGTGCCATCTGGTCAACATTGCCAAAC
AGTCGAAGGTGTAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCCCTTGATGGGATTGAATTACCAGATAGAAGTGATCCCCTTGAAAAGAAATTGCGGA
ATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTATAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCAGGTCAA
GGTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTTTGGAAAGTCCC
ATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACGTTTTCTATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCCAGGCTCGTG
CATCAGACAGTCATCAGATGAATAATGTCACCAAAACACAATTTCTGACTAAAGTGGTTGTAAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTTGTT
GGCTTGTTCAACGGAAATTCCAAGGATATCCATTCGATGAACAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTTGCAAGCCAAATTATTCT
TTGGCTTCATGAGGAAGCTCTAACCTGGGGAATAAAGGCCAACCGTGATTTCCTAAGTCTGTCATTTGAGCTAGAACAAGGTGAAACACTCCGTCTAGTAGCCCATGTGG
ACCCAGAAGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGACGGTTTGATGGAGGACAGGAAACTTAATTTTGACAGTTCAGATGTTGTGCCTGAATACAGG
AAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTTAACAGTAATGGATTTGGTTAGTTTGTGCAGTGGAGTTGGTGGTAGCTTATAA

mRNA sequence

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AAAAATTTCAGGGACAAATTCGTCACTTCAGTTTTCTGCGGTCATCGGCTGAGCCCTCTGCCAGCGAACTTTGATCCCGATCGCGAACTTGTCTTCCATTCTAGGGCTCC
CTCCAAACCTTTTCAATCCCGACATTATTCCGGTACAATTTTGTGTGAATATGGACGAAGACATGAAAGTCTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATA
GAAGAGAACGGTCTAGAACGATTTCCATCAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAA
AAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTA
TCAACACCGCACTGAAGCGCGTATCTCAAATGCCCTTCATTAAGGGTGCCTTTTCTGGATGTAACCAAGACATTTTTGAGCTTCTGAAGGTGGAAGCTAATGATGCAGTA
ACGGTAGCTGGGATGACAAGGCCAAAACCGTTACCTAATGAAGTTTTGTCAGATCTTGGAGTGTCTGTCGCAACAAAATTACAGTGCTTTCGACATCTTGGTAAATATTT
CAGGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTG
CTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCATGAT
TCGTCTGGAATGCTGGCAATTAATTTACCTCCAAATTCATGTCATTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGATCGTGGTAAAAGTGA
GTCTACAAATTCTTCCAATCAGTCTTCAATGAACAGGGAGAAGGAATTTACAAATGACGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCA
TTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAG
GGTACCTCGGTCTTTATCTCTCTTGTGCCATCTGGTCAACATTGCCAAACAGTCGAAGGTGTAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCCCTTGA
TGGGATTGAATTACCAGATAGAAGTGATCCCCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTA
TAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCAGGTCAAGGTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATG
TTTGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACGTTTTC
TATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCCAGGCTCGTGCATCAGACAGTCATCAGATGAATAATGTCACCAAAACACAATTTCTGACTAAAGTGGTTG
TAAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTTGTTGGCTTGTTCAACGGAAATTCCAAGGATATCCATTCGATGAACAGATATGGTTGTGACTTG
GCTGATCTTCCCGTTATAATTCTGTTGCAGGTTGCAAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACCTGGGGAATAAAGGCCAACCGTGATTTCCTAAGTCT
GTCATTTGAGCTAGAACAAGGTGAAACACTCCGTCTAGTAGCCCATGTGGACCCAGAAGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGACGGTTTGATGG
AGGACAGGAAACTTAATTTTGACAGTTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTTAACAGTAATGGATTTGGTTAGT
TTGTGCAGTGGAGTTGGTGGTAGCTTATAACCATGCCTTTCTTGTCTGGTATTACAAATAGAAATTGCATTGAGTTCTTGTAATTTCTGCCTCTAGATTTTCAAATCTAA
TGATATCTTCAGTTTTTGTCCGCATTGCTTACTCAACTTCATATATTATTTATATAACTATGCAAAAATAGTAAATGTAGGGCCATGGATGGTTGGAAGCTGACTTCAAG
ATGAAGAAACCGTTTAGCGAGGCTTTGTTTTGTTAACTATTTAGTTTTTTTTTTTTTTTTTATTCACTTGGTTATTATGCTTTGTGTCTACATTGGATGAGTATTTTCAA
AAAAACTATTTCAGAAACTTATTTTCTTTTGGTAAAAGTACTCTTTTAGCCCCTAGGTTTTTAAGATGTGGATTTGGTCTCTAATATCTTAAATTGTCCATTTTAGTCC

Protein sequence

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MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQMPFIKGA
FSGCNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFRQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNS
SCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKSESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAFNP
SLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQ
GSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSILHPNSIQARASDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVV
GLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYR
KFLGHLSLEVLHLTVMDLVSLCSGVGGSL

CcUC08G146200 (gene) of Watermelon (PI 537277) v1 genome