CuGenDBv2

Gene ID	CcUC08G149290
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	CCHC-type domain-containing protein
Genome location	CicolChr08:16026089..16026394
RNA-Seq Expression	CcUC08G149290
Synteny	CcUC08G149290
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

BBG96384.1 ADP glucose pyrophosphorylase large subunit 1 [Prunus dulcis]

6.1e-32

75.26

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Query:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN
        MTTE   GSFIQPA P  D  YDHWSMLMENFLRSKE W LVE GY+EPA+ S+QT+AQRKKND +KL+DLK+KNYLFQAIDRT+L+TILKK TAK+
Subjt:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN

KAF2282711.1 hypothetical protein GH714_043687 [Hevea brasiliensis]

1.4e-31

74.23

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Query:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN
        MT+E   GSFIQPA P  D  YDHWSMLMENFLRSKE WELVE GY+EP++ S QTEAQRKK +++KL+DLK+KNYLFQAIDRTIL+TILKK TAK+
Subjt:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN

KAF2301756.1 hypothetical protein GH714_028913 [Hevea brasiliensis]

1.8e-31

73.2

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Query:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN
        MT+E   GSFIQPA P  D  YDHWSMLMENFLRSKE WELVE GY+EP++ S QTEAQRKK +++KL+DLK+KNYLFQAIDRT+L+TILKK TAK+
Subjt:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN

KAF8404908.1 hypothetical protein HHK36_009803 [Tetracentron sinense]

3.6e-32

75.26

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Query:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN
        MTTE   GSFIQPA P  D  YDHWSMLMENFLRSKE W LVE GY+EPA+ S+QT+AQRKKND++KL+DLK+KNYLFQAIDRT+L+TILKK TAK+
Subjt:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN

RVW85339.1 hypothetical protein CK203_045529 [Vitis vinifera]

8.0e-32

74.23

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Query:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN
        MTTE   GSFIQPA PH D  YDHW+MLMENFLRSKE W LVE GY+EP   S+QT+AQRKKND++KL+DLK+KNYLFQAIDRT+L+TILKK TAK+
Subjt:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN

TrEMBL top hits

e value

%identity

Alignment

A0A2N9G6A8 Uncharacterized protein

1.3e-32

75.26

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Query:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN
        MTTE   GSFIQPA P  D  YDHWSMLMENFLRSKE W LVE GY+EPA+ S+QT+AQRKKND++KL+DLK+KNYLFQAIDRT+L+TILKK TAK+
Subjt:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN

A0A2N9GWV7 Integrase catalytic domain-containing protein

3.0e-32

75.26

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Query:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN
        MTTE   GSFIQPA P  D  YDHWSMLMENFLRSKE W LVE GY+EPA+ S+QT+AQRKKND +KL+DLK+KNYLFQAIDRT+L+TILKK TAK+
Subjt:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN

A0A2N9H9R9 Uncharacterized protein

1.3e-32

75.26

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Query:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN
        MTTE   GSFIQPA P  D  YDHWSMLMENFLRSKE W LVE GY+EPA+ S+QT+AQRKKND++KL+DLK+KNYLFQAIDRT+L+TILKK TAK+
Subjt:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN

A0A438HLQ7 CCHC-type domain-containing protein

3.9e-32

74.23

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Query:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN
        MTTE   GSFIQPA PH D  YDHW+MLMENFLRSKE W LVE GY+EP   S+QT+AQRKKND++KL+DLK+KNYLFQAIDRT+L+TILKK TAK+
Subjt:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN

A0A4Y1QX25 ADP glucose pyrophosphorylase large subunit 1

3.0e-32

75.26

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Query:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN
        MTTE   GSFIQPA P  D  YDHWSMLMENFLRSKE W LVE GY+EPA+ S+QT+AQRKKND +KL+DLK+KNYLFQAIDRT+L+TILKK TAK+
Subjt:  MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G48720.1 unknown protein

3.6e-06

28.21

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Query:  ARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN
        + YD+WS+ M+  L + + WE+VE G++EP N    ++ Q+      + +D K    ++Q +D    E +++  +AK+
Subjt:  ARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKN

Sequences

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CDS sequence

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ATGACTACCGAAAAGAATGTAGGAAGTTTTATACAACCAGCAAGTCCACACTTAGATGCTCGCTATGATCATTGGAGCATGTTGATGGAAAATTTTCTTAGATCCAAGGA
ACATTGGGAGTTGGTAGAACTTGGATATGTTGAACCAGCTAATGTGTCGTTGCAGACGGAAGCCCAACGAAAGAAAAATGATAAAATTAAGCTACAGGACTTGAAACTGA
AAAATTATCTCTTCCAAGCCATTGACCGCACAATTCTGGAAACCATTCTTAAGAAATATACTGCCAAGAATTATGGGATGCTATGA

mRNA sequence

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Protein sequence

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MTTEKNVGSFIQPASPHLDARYDHWSMLMENFLRSKEHWELVELGYVEPANVSLQTEAQRKKNDKIKLQDLKLKNYLFQAIDRTILETILKKYTAKNYGML

CcUC08G149290 (gene) of Watermelon (PI 537277) v1 genome