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CcUC08G150700 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC08G150700
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionextensin-3-like
Genome locationCicolChr08:18933327..18933800
RNA-Seq ExpressionCcUC08G150700
SyntenyCcUC08G150700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058946.1 extensin-3-like [Cucumis melo var. makuwa]6.4e-2864.52Show/hide
Query:  MPLLSLNLPSNFAAHHIHPSPWSLLPSPPPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPY-PPSYHVIPPP
        MPLLS NLPSNFA H+I PS  S  PS PPTT+PIVPY+PFI  PPP KKT KHT   P S P +ELGRPIVPYYP+KFLPPP RK  + PP YHV PP 
Subjt:  MPLLSLNLPSNFAAHHIHPSPWSLLPSPPPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPY-PPSYHVIPPP

Query:  ASPLSVKKLYISQARRSVPPPPPK
          P   KKL++S AR++ P PPP+
Subjt:  ASPLSVKKLYISQARRSVPPPPPK

KAA0058948.1 extensin-3-like [Cucumis melo var. makuwa]2.5e-2464.08Show/hide
Query:  PPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPYPP-SYHVIPPPASPLSVKKLYISQARRSVPPPPPKEQPP
        P  TRPIVPY+PFIFPPP  K   +HT  PPP  P Q+L RPIVPYYP+KF PPPSRK+  PP SYH  PPP  PL  KKLY+S+ RR+ PPPPPK+  P
Subjt:  PPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPYPP-SYHVIPPPASPLSVKKLYISQARRSVPPPPPKEQPP

Query:  YPW
        Y W
Subjt:  YPW

KAE8647164.1 hypothetical protein Csa_018816, partial [Cucumis sativus]3.5e-2661.19Show/hide
Query:  MPLLSLNLPSNFAAHHIHPSPWSLLPSP--PPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPL-QELGRPIVPYYPFKFLPPPSRKRPY-PPSYHVI
        M LLSLNLPSN A H I   P SLL  P  PP TRPIVP++PF F P P +KT +HT  PPPS P  QEL RPIVPY+P+KF PPPSRK+   PPSYH  
Subjt:  MPLLSLNLPSNFAAHHIHPSPWSLLPSP--PPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPL-QELGRPIVPYYPFKFLPPPSRKRPY-PPSYHVI

Query:  PPPASPLSVKKLYISQARRSVPPPPPKEQPPYPW
        PPPA  L  +KLY+S+ RR+ PPPPP +  PY W
Subjt:  PPPASPLSVKKLYISQARRSVPPPPPKEQPPYPW

TYK10982.1 extensin-3-like [Cucumis melo var. makuwa]6.4e-2864.52Show/hide
Query:  MPLLSLNLPSNFAAHHIHPSPWSLLPSPPPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPY-PPSYHVIPPP
        MPLLS NLPSNFA H+I PS  S  PS PPTT+PIVPY+PFI  PPP KKT KHT   P S P +ELGRPIVPYYP+KFLPPP RK  + PP YHV PP 
Subjt:  MPLLSLNLPSNFAAHHIHPSPWSLLPSPPPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPY-PPSYHVIPPP

Query:  ASPLSVKKLYISQARRSVPPPPPK
          P   KKL++S AR++ P PPP+
Subjt:  ASPLSVKKLYISQARRSVPPPPPK

XP_008466986.1 PREDICTED: extensin-3-like, partial [Cucumis melo]1.6e-3468.7Show/hide
Query:  MESHNPLFVFFLLIIMPLLSLNLPSNFAAHHIHPSPWSLLPSPPP---TTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPP
        MESHNP+FVFFL II+PLLSLNLPSNFAAH+I   P SLL SPPP    TRPIVPY+PFIFPPP  K   +HT  PPP  P Q+L RPIVPYYP+KF PP
Subjt:  MESHNPLFVFFLLIIMPLLSLNLPSNFAAHHIHPSPWSLLPSPPP---TTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPP

Query:  PSRKRPYPP-SYHVIPPPASPLSVKKLYISQ
        PSRK+  PP SYH  PPP  PL  KKLY+S+
Subjt:  PSRKRPYPP-SYHVIPPPASPLSVKKLYISQ

TrEMBL top hitse value%identityAlignment
A0A0A0KD80 Uncharacterized protein1.0e-3462.35Show/hide
Query:  MESHNPLFVFFLLIIMPLLSLNLPSNFAAHHIHPSPWSLLPSP--PPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPL-QELGRPIVPYYPFKFLPP
        MES NP+FVFFL IIM LLSLNLPSN A H I   P SLL  P  PP TRPIVP++PF F P P +KT +HT  PPPS P  QEL RPIVPY+P+KF PP
Subjt:  MESHNPLFVFFLLIIMPLLSLNLPSNFAAHHIHPSPWSLLPSP--PPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPL-QELGRPIVPYYPFKFLPP

Query:  PSRKRPY-PPSYHVIPPPASPLSVKKLYISQARRSVPPPPPKEQPPYPW-GWTIPRSPPPPF
        PSRK+   PPSYH  PPPA  L  +KLY+S+ RR+ PPPPP +  PY W    I +SPPPPF
Subjt:  PSRKRPY-PPSYHVIPPPASPLSVKKLYISQARRSVPPPPPKEQPPYPW-GWTIPRSPPPPF

A0A1S3CSG8 extensin-3-like7.6e-3568.7Show/hide
Query:  MESHNPLFVFFLLIIMPLLSLNLPSNFAAHHIHPSPWSLLPSPPP---TTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPP
        MESHNP+FVFFL II+PLLSLNLPSNFAAH+I   P SLL SPPP    TRPIVPY+PFIFPPP  K   +HT  PPP  P Q+L RPIVPYYP+KF PP
Subjt:  MESHNPLFVFFLLIIMPLLSLNLPSNFAAHHIHPSPWSLLPSPPP---TTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPP

Query:  PSRKRPYPP-SYHVIPPPASPLSVKKLYISQ
        PSRK+  PP SYH  PPP  PL  KKLY+S+
Subjt:  PSRKRPYPP-SYHVIPPPASPLSVKKLYISQ

A0A5A7UXN4 Extensin-3-like3.1e-2864.52Show/hide
Query:  MPLLSLNLPSNFAAHHIHPSPWSLLPSPPPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPY-PPSYHVIPPP
        MPLLS NLPSNFA H+I PS  S  PS PPTT+PIVPY+PFI  PPP KKT KHT   P S P +ELGRPIVPYYP+KFLPPP RK  + PP YHV PP 
Subjt:  MPLLSLNLPSNFAAHHIHPSPWSLLPSPPPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPY-PPSYHVIPPP

Query:  ASPLSVKKLYISQARRSVPPPPPK
          P   KKL++S AR++ P PPP+
Subjt:  ASPLSVKKLYISQARRSVPPPPPK

A0A5D3CI60 Extensin-3-like3.1e-2864.52Show/hide
Query:  MPLLSLNLPSNFAAHHIHPSPWSLLPSPPPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPY-PPSYHVIPPP
        MPLLS NLPSNFA H+I PS  S  PS PPTT+PIVPY+PFI  PPP KKT KHT   P S P +ELGRPIVPYYP+KFLPPP RK  + PP YHV PP 
Subjt:  MPLLSLNLPSNFAAHHIHPSPWSLLPSPPPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPY-PPSYHVIPPP

Query:  ASPLSVKKLYISQARRSVPPPPPK
          P   KKL++S AR++ P PPP+
Subjt:  ASPLSVKKLYISQARRSVPPPPPK

A0A5D3CVI1 Extensin-3-like1.2e-2464.08Show/hide
Query:  PPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPYPP-SYHVIPPPASPLSVKKLYISQARRSVPPPPPKEQPP
        P  TRPIVPY+PFIFPPP  K   +HT  PPP  P Q+L RPIVPYYP+KF PPPSRK+  PP SYH  PPP  PL  KKLY+S+ RR+ PPPPPK+  P
Subjt:  PPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPYPP-SYHVIPPPASPLSVKKLYISQARRSVPPPPPKEQPP

Query:  YPW
        Y W
Subjt:  YPW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G43150.1 Proline-rich extensin-like family protein3.6e-0537.4Show/hide
Query:  PSPWSLLPSPPPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPP---SLPLQELGRPIVPYYPFKFLPPPSRKRPYPPSYHVIPPPASPLSVKKLYISQARR
        P P+     PPP   P  PYY +  PPPP K      S PPP   S P   +  P  PYY     PPP  K P PP Y+  PPP         Y      
Subjt:  PSPWSLLPSPPPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPP---SLPLQELGRPIVPYYPFKFLPPPSRKRPYPPSYHVIPPPASPLSVKKLYISQARR

Query:  SVPPPPPKEQPPYPWGWTIP----RSPPPPF
           PPPP + PP P+ +  P    +SPPPP+
Subjt:  SVPPPPPKEQPPYPWGWTIP----RSPPPPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTCATAACCCCCTTTTCGTATTCTTCCTCCTCATCATCATGCCATTGCTCTCTTTAAATTTGCCATCAAATTTTGCTGCACACCATATTCACCCATCTCCTTG
GTCGTTGCTTCCGTCGCCACCTCCGACCACCAGACCTATAGTTCCTTATTACCCTTTTATATTTCCTCCTCCTCCATCTAAAAAGACTCATAAACACACATCGCGACCGC
CACCGTCGTTGCCACTGCAGGAATTGGGAAGGCCAATAGTTCCTTATTATCCATTTAAATTTCTACCACCTCCATCAAGAAAACGCCCTTATCCTCCGAGCTACCATGTC
ATTCCCCCACCGGCGTCACCACTGTCAGTGAAGAAGCTTTACATATCCCAGGCAAGGCGGTCAGTGCCGCCGCCACCGCCAAAGGAGCAACCGCCATATCCTTGGGGGTG
GACCATCCCTAGATCGCCCCCACCTCCTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTCATAACCCCCTTTTCGTATTCTTCCTCCTCATCATCATGCCATTGCTCTCTTTAAATTTGCCATCAAATTTTGCTGCACACCATATTCACCCATCTCCTTG
GTCGTTGCTTCCGTCGCCACCTCCGACCACCAGACCTATAGTTCCTTATTACCCTTTTATATTTCCTCCTCCTCCATCTAAAAAGACTCATAAACACACATCGCGACCGC
CACCGTCGTTGCCACTGCAGGAATTGGGAAGGCCAATAGTTCCTTATTATCCATTTAAATTTCTACCACCTCCATCAAGAAAACGCCCTTATCCTCCGAGCTACCATGTC
ATTCCCCCACCGGCGTCACCACTGTCAGTGAAGAAGCTTTACATATCCCAGGCAAGGCGGTCAGTGCCGCCGCCACCGCCAAAGGAGCAACCGCCATATCCTTGGGGGTG
GACCATCCCTAGATCGCCCCCACCTCCTTTCTAA
Protein sequenceShow/hide protein sequence
MESHNPLFVFFLLIIMPLLSLNLPSNFAAHHIHPSPWSLLPSPPPTTRPIVPYYPFIFPPPPSKKTHKHTSRPPPSLPLQELGRPIVPYYPFKFLPPPSRKRPYPPSYHV
IPPPASPLSVKKLYISQARRSVPPPPPKEQPPYPWGWTIPRSPPPPF