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CcUC08G150800 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC08G150800
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionDUF4283 domain-containing protein
Genome locationCicolChr08:19006870..19007196
RNA-Seq ExpressionCcUC08G150800
SyntenyCcUC08G150800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039967.1 hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa]5.4e-2650.49Show/hide
Query:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP
        + +W  T+VLTR   HDDW + +E L +  D    + PF A+K LI F+ + QA+LLC NK W T+G F VKF++WS + HA PK++PSYGGW+K RG+P
Subjt:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP

Query:  LNA
        L+A
Subjt:  LNA

KAA0040039.1 hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa]3.2e-2653Show/hide
Query:  WSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMPLNA
        W  T VLTR   HDDW + +E L +  D    + PFHA+K LI F+ + QA+LLC NK W T+G F VKF++WS + HA PK++PSYGGW+K RG+PL+A
Subjt:  WSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMPLNA

KAA0050054.1 hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]1.4e-2650.49Show/hide
Query:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP
        + +W  T+VLTR   HDDW K +E L +  D    + PFHA+K LI F+ + QA L+C NK W T+G F VKF++W+ + HA PK++PSYGGW+K RG+P
Subjt:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP

Query:  LNA
        L+A
Subjt:  LNA

TYK10355.1 hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]1.4e-2650.49Show/hide
Query:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP
        + +W  T+VLTR   HDDW K +E L +  D    + PFHA+K LI F+ + QA L+C NK W T+G F VKF++W+ + HA PK++PSYGGW+K RG+P
Subjt:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP

Query:  LNA
        L+A
Subjt:  LNA

TYK24535.1 hypothetical protein E5676_scaffold266G00770 [Cucumis melo var. makuwa]6.4e-2751.46Show/hide
Query:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP
        + +W  T+VLTR   HDDW + +E L +  D    + PFHA+K LI F+ + QA+LLC NK W T+G F VKF++WS + HA PK++PSYGGW+K RG+P
Subjt:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP

Query:  LNA
        L+A
Subjt:  LNA

TrEMBL top hitse value%identityAlignment
A0A5A7TFK7 DUF4283 domain-containing protein1.5e-2653Show/hide
Query:  WSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMPLNA
        W  T VLTR   HDDW + +E L +  D    + PFHA+K LI F+ + QA+LLC NK W T+G F VKF++WS + HA PK++PSYGGW+K RG+PL+A
Subjt:  WSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMPLNA

A0A5A7U495 DUF4283 domain-containing protein6.9e-2750.49Show/hide
Query:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP
        + +W  T+VLTR   HDDW K +E L +  D    + PFHA+K LI F+ + QA L+C NK W T+G F VKF++W+ + HA PK++PSYGGW+K RG+P
Subjt:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP

Query:  LNA
        L+A
Subjt:  LNA

A0A5D3C3G6 Cleavage and polyadenylation specificity factor subunit 12.6e-2652.94Show/hide
Query:  LKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMPL
        L W+  +VLTR   HDDW K +E L+D  D   ++ PFHA+K LI F++K QA L+C NK W T+G F VKF++W+ + HA  K+VPSYGGW+K RG+PL
Subjt:  LKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMPL

Query:  NA
        +A
Subjt:  NA

A0A5D3CFS8 DUF4283 domain-containing protein6.9e-2750.49Show/hide
Query:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP
        + +W  T+VLTR   HDDW K +E L +  D    + PFHA+K LI F+ + QA L+C NK W T+G F VKF++W+ + HA PK++PSYGGW+K RG+P
Subjt:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP

Query:  LNA
        L+A
Subjt:  LNA

A0A5D3DLP0 DUF4283 domain-containing protein3.1e-2751.46Show/hide
Query:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP
        + +W  T+VLTR   HDDW + +E L +  D    + PFHA+K LI F+ + QA+LLC NK W T+G F VKF++WS + HA PK++PSYGGW+K RG+P
Subjt:  NLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMP

Query:  LNA
        L+A
Subjt:  LNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAAGAAAATTTGAAATGGAGCAACACGATTGTACTTACTCGACATAGTGTCCATGACGATTGGGTAAAAACAATGGAAGCCCTTCGAGATTCCAATGATGT
CATTGATGCATTTAACCCCTTCCATGCGAATAAGGTGTTAATATCCTTCAGAGAGAAAGTTCAGGCTCGTCTGTTATGCCTAAACAAGAGATGGGTTACTATAGGACCTT
TCATTGTGAAATTCAAAAAATGGAGTTCACAACTACATGCCCATCCTAAGCTTGTTCCTAGTTATGGTGGCTGGCTTAAGTTTAGAGGAATGCCATTAAACGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAAGAAAATTTGAAATGGAGCAACACGATTGTACTTACTCGACATAGTGTCCATGACGATTGGGTAAAAACAATGGAAGCCCTTCGAGATTCCAATGATGT
CATTGATGCATTTAACCCCTTCCATGCGAATAAGGTGTTAATATCCTTCAGAGAGAAAGTTCAGGCTCGTCTGTTATGCCTAAACAAGAGATGGGTTACTATAGGACCTT
TCATTGTGAAATTCAAAAAATGGAGTTCACAACTACATGCCCATCCTAAGCTTGTTCCTAGTTATGGTGGCTGGCTTAAGTTTAGAGGAATGCCATTAAACGCCTGA
Protein sequenceShow/hide protein sequence
MEEEENLKWSNTIVLTRHSVHDDWVKTMEALRDSNDVIDAFNPFHANKVLISFREKVQARLLCLNKRWVTIGPFIVKFKKWSSQLHAHPKLVPSYGGWLKFRGMPLNA