| GenBank top hits | e value | %identity | Alignment |
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| BAJ88101.1 predicted protein, partial [Hordeum vulgare subsp. vulgare] | 5.8e-40 | 75.2 | Show/hide |
Query: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
MA+EE+ VKEPLDLIRLSLDERIYVKLRSDRELRGKLH L N I + K E T+ + AYDQHLNMILGDVEEIVT++EIDDETYEEIVRT
Subjt: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Query: SRRTVPFLFVRGDGVILVSPPLRTV
S+RT+P+LFVRGDGVILVSPPLRTV
Subjt: SRRTVPFLFVRGDGVILVSPPLRTV
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| KAG6517371.1 hypothetical protein ZIOFF_020756 [Zingiber officinale] | 8.4e-39 | 70.99 | Show/hide |
Query: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVK-------AYDQHLNMILGDVEEIVTTVEIDDET
MA+EEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLH + + + + G + + AYDQHLNMILGDVEEI+TTVEIDDET
Subjt: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVK-------AYDQHLNMILGDVEEIVTTVEIDDET
Query: YEEIVRTSRRTVPFLFVRGDGVILVSPPLRT
YEEIVRT++RTVPFLFVRGDGVILVSPPLRT
Subjt: YEEIVRTSRRTVPFLFVRGDGVILVSPPLRT
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| XP_008441520.1 PREDICTED: sm-like protein LSM3B [Cucumis melo] | 4.9e-39 | 76.8 | Show/hide |
Query: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLH AYDQHLNMILGDVEE VTTVEIDDETYEEIVRT
Subjt: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Query: SRRTVPFLFVRGDGVILVSPPLRTV
SRRTVPFLFVRGDGVILVSPPLRTV
Subjt: SRRTVPFLFVRGDGVILVSPPLRTV
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| XP_022133461.1 sm-like protein LSM3A [Momordica charantia] | 9.9e-40 | 77.6 | Show/hide |
Query: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLH AYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Subjt: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Query: SRRTVPFLFVRGDGVILVSPPLRTV
SRRTVPFLFVRGDGVILVSPPLRTV
Subjt: SRRTVPFLFVRGDGVILVSPPLRTV
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| XP_042464523.1 sm-like protein LSM3A isoform X1 [Zingiber officinale] | 1.3e-39 | 70.29 | Show/hide |
Query: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVS--------------NFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTT
MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHG N ++ A + + +AYDQHLNMILGDVEEI+TT
Subjt: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVS--------------NFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTT
Query: VEIDDETYEEIVRTSRRTVPFLFVRGDGVILVSPPLRT
VEIDDETYEEIVRT+RRTVPFLFVRGDGVILVSPPLRT
Subjt: VEIDDETYEEIVRTSRRTVPFLFVRGDGVILVSPPLRT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A287G9K8 U6 snRNA-associated Sm-like protein LSm3 | 7.4e-41 | 76 | Show/hide |
Query: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
MA+EE+ VKEPLDLIRLSLDERIYVKLRSDRELRGKLH L N I + K E T+K + AYDQHLNMILGDVEEIVT++EIDDETYEEIVRT
Subjt: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Query: SRRTVPFLFVRGDGVILVSPPLRTV
S+RT+P+LFVRGDGVILVSPPLRTV
Subjt: SRRTVPFLFVRGDGVILVSPPLRTV
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| A0A6J1BV62 U6 snRNA-associated Sm-like protein LSm3 | 4.8e-40 | 77.6 | Show/hide |
Query: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLH AYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Subjt: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Query: SRRTVPFLFVRGDGVILVSPPLRTV
SRRTVPFLFVRGDGVILVSPPLRTV
Subjt: SRRTVPFLFVRGDGVILVSPPLRTV
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| A0A6J1FGZ1 U6 snRNA-associated Sm-like protein LSm3 | 4.8e-40 | 77.6 | Show/hide |
Query: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLH AYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Subjt: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Query: SRRTVPFLFVRGDGVILVSPPLRTV
SRRTVPFLFVRGDGVILVSPPLRTV
Subjt: SRRTVPFLFVRGDGVILVSPPLRTV
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| A0A6J1JZX1 U6 snRNA-associated Sm-like protein LSm3 | 4.8e-40 | 77.6 | Show/hide |
Query: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLH AYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Subjt: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Query: SRRTVPFLFVRGDGVILVSPPLRTV
SRRTVPFLFVRGDGVILVSPPLRTV
Subjt: SRRTVPFLFVRGDGVILVSPPLRTV
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| F2CZ30 U6 snRNA-associated Sm-like protein LSm3 (Fragment) | 2.8e-40 | 75.2 | Show/hide |
Query: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
MA+EE+ VKEPLDLIRLSLDERIYVKLRSDRELRGKLH L N I + K E T+ + AYDQHLNMILGDVEEIVT++EIDDETYEEIVRT
Subjt: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Query: SRRTVPFLFVRGDGVILVSPPLRTV
S+RT+P+LFVRGDGVILVSPPLRTV
Subjt: SRRTVPFLFVRGDGVILVSPPLRTV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P62310 U6 snRNA-associated Sm-like protein LSm3 | 1.3e-31 | 60.68 | Show/hide |
Query: STVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTSRRTVP
+TV+EPLDLIRLSLDERIYVK+R+DRELRG+LH AYDQHLNMILGDVEE VTT+EID+ETYEEI ++++R +P
Subjt: STVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTSRRTVP
Query: FLFVRGDGVILVSPPLR
LFVRGDGV+LV+PPLR
Subjt: FLFVRGDGVILVSPPLR
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| P62311 U6 snRNA-associated Sm-like protein LSm3 | 1.3e-31 | 60.68 | Show/hide |
Query: STVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTSRRTVP
+TV+EPLDLIRLSLDERIYVK+R+DRELRG+LH AYDQHLNMILGDVEE VTT+EID+ETYEEI ++++R +P
Subjt: STVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTSRRTVP
Query: FLFVRGDGVILVSPPLR
LFVRGDGV+LV+PPLR
Subjt: FLFVRGDGVILVSPPLR
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| Q32PE9 U6 snRNA-associated Sm-like protein LSm3 | 1.3e-31 | 60.68 | Show/hide |
Query: STVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTSRRTVP
+TV+EPLDLIRLSLDERIYVK+R+DRELRG+LH AYDQHLNMILGDVEE VTT+EID+ETYEEI ++++R +P
Subjt: STVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTSRRTVP
Query: FLFVRGDGVILVSPPLR
LFVRGDGV+LV+PPLR
Subjt: FLFVRGDGVILVSPPLR
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| Q9C6K5 Sm-like protein LSM3B | 2.1e-37 | 68.55 | Show/hide |
Query: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
M+ EEE+TV+EPLDLIRLSLDERIYVKLRSDRELRGKLH A+DQHLNMILGDVEE +TTVEIDDETYEEIVRT
Subjt: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Query: SRRTVPFLFVRGDGVILVSPPLRT
++RT+ FLFVRGDGVILVSPPLRT
Subjt: SRRTVPFLFVRGDGVILVSPPLRT
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| Q9LMN4 Sm-like protein LSM3A | 5.7e-38 | 66.94 | Show/hide |
Query: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
M+ EE++TV+EPLDLIRLS++ERIYVKLRSDRELRGKLH A+DQHLNMILGDVEE++TT+EIDDETYEEIVRT
Subjt: MATEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHGLVSNFSIFAVMKLDESGKSALTVKSVKAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRT
Query: SRRTVPFLFVRGDGVILVSPPLRT
++RTVPFLFVRGDGVILVSPPLRT
Subjt: SRRTVPFLFVRGDGVILVSPPLRT
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