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CcUC08G151120 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC08G151120
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionproline-rich proteoglycan 2-like
Genome locationCicolChr08:19345450..19346063
RNA-Seq ExpressionCcUC08G151120
SyntenyCcUC08G151120
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8101604.1 hypothetical protein N665_0203s0016 [Sinapis alba]6.3e-1448.74Show/hide
Query:  VASYLNNVEAKRDERGDMLSLGFKRLVPTGPNPATSPESPPLSL---GTKRLVPTGPNPATSQESPPLTL---GTKRLVPTGPNPTKSPESPPLIL---G
        V S LNN  +       ++++G +RLVP+GPN  TSP SPP S+   G KRLVP+GPN  TS  SPP ++   G KRLVP+GPN   SP SPP  +   G
Subjt:  VASYLNNVEAKRDERGDMLSLGFKRLVPTGPNPATSPESPPLSL---GTKRLVPTGPNPATSQESPPLTL---GTKRLVPTGPNPTKSPESPPLIL---G

Query:  IKRLGSNRLKSNNISSKPS
        +KRL  N    NN +S PS
Subjt:  IKRLGSNRLKSNNISSKPS

XP_010489947.1 PREDICTED: leucine-rich repeat extensin-like protein 5 [Camelina sativa]1.4e-1350Show/hide
Query:  GFKRLVPTGPNPATSPESPPLS---LGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKRLGSNRLKSNNISSKPSIIFAHQEA
        G KRL P+GPN ATSP SP  S   +G KRLVP+GPN  TS  SP   +G KRLVP+GPN   SP SP    G KRL  +    NN +S PS  F+  + 
Subjt:  GFKRLVPTGPNPATSPESPPLS---LGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKRLGSNRLKSNNISSKPSIIFAHQEA

Query:  CSNWLKPS
         +  L PS
Subjt:  CSNWLKPS

XP_022159163.1 proline-rich proteoglycan 2-like [Momordica charantia]2.1e-2540.22Show/hide
Query:  VFVASYLNNVEAKRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKRLGSN
        V + S  N VEA+RD  GD+L+L  KR VP GPNPATSPE PP +LG KR VPT PNP TS + PPLTLG KR VPTGPNP  SPESPP I G+KR    
Subjt:  VFVASYLNNVEAKRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKRLGSN

Query:  RLKSNNISSKPSIIFAHQEACSNWLKPSNIFQKSSIDFRDETTRSNRPKSSNICRKPSNNFRHKATCPNWPKSSNISKKSSIMI
                 +P   F+ +        P+   ++    F  +      P  +    +P      K   P  P  +   ++  I +
Subjt:  RLKSNNISSKPSIIFAHQEACSNWLKPSNIFQKSSIDFRDETTRSNRPKSSNICRKPSNNFRHKATCPNWPKSSNISKKSSIMI

XP_022930205.1 proline-rich proteoglycan 2-like [Cucurbita moschata]1.3e-1966.67Show/hide
Query:  KRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKR
        K       L+LG KR VPTGPN ATSP++PPL LGTKR V TGPNPATS +SPP +LGTKR VP GPNP  S ESPPL L  KR
Subjt:  KRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKR

XP_042505653.1 sporozoite surface protein 2-like [Macadamia integrifolia]4.3e-1553.06Show/hide
Query:  LSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKR---LGSNRLKSNNISSKPSIIF
        LS G KR VPTGPN A SP  PP S G KR VPTGPN A S + PP + G KR VPTGPN  +SP+ PP   G+KR    G N  +S     KP + F
Subjt:  LSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKR---LGSNRLKSNNISSKPSIIF

TrEMBL top hitse value%identityAlignment
A0A2N9H747 Uncharacterized protein1.5e-1356.99Show/hide
Query:  GFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKRL---GSNRLKSNNISSKPSI
        G KRLVP+GPNP    ESPP   G+KRLVP+GPNP    ESPP   G+KRLVP+GPNP    ESPP + G KRL   G N +  N I S PS+
Subjt:  GFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKRL---GSNRLKSNNISSKPSI

A0A6J0NTX1 leucine-rich repeat extensin-like protein 56.8e-1456Show/hide
Query:  SLGFKRLVPTGPNPATSPESPP---LSLGTKRLVPTGPNPATSQESPP---LTLGTKRLVPTGPNPTKSPESPPLIL---GIKRLGSNRLKSNNISSKPS
        S+G KRLVPTGPN  TSP SPP   +  G KRLVPTGPN  TS  SPP      G KRLVPTGPN   SP SPP  +   G+KRL  +    NN +S PS
Subjt:  SLGFKRLVPTGPNPATSPESPP---LSLGTKRLVPTGPNPATSQESPP---LTLGTKRLVPTGPNPTKSPESPPLIL---GIKRLGSNRLKSNNISSKPS

A0A6J1DY20 proline-rich proteoglycan 2-like1.0e-2540.22Show/hide
Query:  VFVASYLNNVEAKRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKRLGSN
        V + S  N VEA+RD  GD+L+L  KR VP GPNPATSPE PP +LG KR VPT PNP TS + PPLTLG KR VPTGPNP  SPESPP I G+KR    
Subjt:  VFVASYLNNVEAKRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKRLGSN

Query:  RLKSNNISSKPSIIFAHQEACSNWLKPSNIFQKSSIDFRDETTRSNRPKSSNICRKPSNNFRHKATCPNWPKSSNISKKSSIMI
                 +P   F+ +        P+   ++    F  +      P  +    +P      K   P  P  +   ++  I +
Subjt:  RLKSNNISSKPSIIFAHQEACSNWLKPSNIFQKSSIDFRDETTRSNRPKSSNICRKPSNNFRHKATCPNWPKSSNISKKSSIMI

A0A6J1EWC0 proline-rich proteoglycan 2-like6.3e-2066.67Show/hide
Query:  KRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKR
        K       L+LG KR VPTGPN ATSP++PPL LGTKR V TGPNPATS +SPP +LGTKR VP GPNP  S ESPPL L  KR
Subjt:  KRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKR

A0A7J7C9Z9 Uncharacterized protein2.0e-1352.17Show/hide
Query:  LSLGFKRLVPTGPNPATSPESPP-----LSLGTKRLVPTGPNPATSQESPP-----LTLGTKRLVPTGPNPTKSPESPPLILGIKRLGSNRL
        L +G KRLVP+GPNP  SP+ PP     L +G+KRLVP+GPNP  S + PP     L +G+KRLVP+GPNP +SP+ PP    +  +GS RL
Subjt:  LSLGFKRLVPTGPNPATSPESPP-----LSLGTKRLVPTGPNPATSQESPP-----LTLGTKRLVPTGPNPTKSPESPPLILGIKRLGSNRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTGTGGCGTCATATCTAAATAATGTGGAAGCAAAGAGGGATGAAAGGGGTGATATGCTTTCCTTAGGCTTCAAAAGACTCGTCCCAACTGGCCCAAATCCAGC
AACATCTCCTGAAAGTCCTCCATTATCGTTGGGCACAAAGAGACTCGTCCCAACCGGCCCAAATCCAGCAACATCTCAGGAAAGTCCTCCACTAACTTTAGGCACAAAAC
GACTCGTTCCAACTGGCCCAAATCCAACAAAATCTCCTGAAAGCCCTCCATTGATTTTAGGCATAAAGCGGCTTGGTTCCAACCGACTCAAATCCAACAACATCTCCTCA
AAGCCCTCCATTATTTTTGCGCACCAAGAGGCTTGTTCCAACTGGCTCAAACCCAGCAACATTTTCCAAAAGTCCTCCATTGACTTTAGGGACGAAACGACTCGTTCCAA
CCGGCCCAAATCCAGCAACATCTGCAGAAAGCCCTCTAATAACTTTAGGCACAAAGCGACTTGTCCCAACTGGCCCAAATCCAGCAACATCTCCAAAAAGTCCTCCATTA
TGATTAGGCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTGTGGCGTCATATCTAAATAATGTGGAAGCAAAGAGGGATGAAAGGGGTGATATGCTTTCCTTAGGCTTCAAAAGACTCGTCCCAACTGGCCCAAATCCAGC
AACATCTCCTGAAAGTCCTCCATTATCGTTGGGCACAAAGAGACTCGTCCCAACCGGCCCAAATCCAGCAACATCTCAGGAAAGTCCTCCACTAACTTTAGGCACAAAAC
GACTCGTTCCAACTGGCCCAAATCCAACAAAATCTCCTGAAAGCCCTCCATTGATTTTAGGCATAAAGCGGCTTGGTTCCAACCGACTCAAATCCAACAACATCTCCTCA
AAGCCCTCCATTATTTTTGCGCACCAAGAGGCTTGTTCCAACTGGCTCAAACCCAGCAACATTTTCCAAAAGTCCTCCATTGACTTTAGGGACGAAACGACTCGTTCCAA
CCGGCCCAAATCCAGCAACATCTGCAGAAAGCCCTCTAATAACTTTAGGCACAAAGCGACTTGTCCCAACTGGCCCAAATCCAGCAACATCTCCAAAAAGTCCTCCATTA
TGATTAGGCACTAA
Protein sequenceShow/hide protein sequence
MVFVASYLNNVEAKRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKRLGSNRLKSNNISS
KPSIIFAHQEACSNWLKPSNIFQKSSIDFRDETTRSNRPKSSNICRKPSNNFRHKATCPNWPKSSNISKKSSIMIRH