CuGenDBv2

Gene ID	CcUC08G155690
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	TPR_REGION domain-containing protein
Genome location	CicolChr08:24129551..24130186
RNA-Seq Expression	CcUC08G155690
Synteny	CcUC08G155690
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152601.1 uncharacterized protein LOC101214199 [Cucumis sativus]

7.4e-96

96.68

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEE+GDAL KRAELKMSTNRRALVDSALADLTESVTLS NANSYYWLGKCYE KKLR EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_008444918.1 PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo]

1.5e-96

96.68

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD+
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEE+GDAL KRAELKMSTNRRALVDSALADLTESVTLS NANSYYWLGKCYE+KKLR EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_022951869.1 uncharacterized protein LOC111454602 [Cucurbita moschata]

1.1e-91

92.42

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EE+GDAL KRAELKMSTNRR +VDSALADLTESVTLS NAN+Y WLGKCYE+KKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_023537835.1 uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]

3.8e-92

92.89

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EE+GDAL KRAELKMSTNRRA+VDSALADLTESVTLS NAN+Y WLGKCYE+KKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_038884950.1 uncharacterized protein LOC120075535 [Benincasa hispida]

6.7e-97

97.16

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQI LILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEE+GDAL KRAELKMSTNRRALVDSALADLTESVTLS NANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPL8 TPR_REGION domain-containing protein

3.6e-96

96.68

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEE+GDAL KRAELKMSTNRRALVDSALADLTESVTLS NANSYYWLGKCYE KKLR EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A1S3BC86 uncharacterized protein LOC103488119

7.2e-97

96.68

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD+
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEE+GDAL KRAELKMSTNRRALVDSALADLTESVTLS NANSYYWLGKCYE+KKLR EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A5A7VBU3 TPR domain protein

7.2e-97

96.68

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD+
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEE+GDAL KRAELKMSTNRRALVDSALADLTESVTLS NANSYYWLGKCYE+KKLR EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A6J1GK03 uncharacterized protein LOC111454602

5.3e-92

92.42

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EE+GDAL KRAELKMSTNRR +VDSALADLTESVTLS NAN+Y WLGKCYE+KKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A6J1KRQ5 uncharacterized protein LOC111496615

7.0e-92

91.94

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EE+GDAL KRAELKMSTNRRA+VDSA+ADLTESVTLS NAN+Y WLGKCYE+KKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLS+S
Subjt:  AREALERLSSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.7e-34

43.28

Show/hide

Query:  TDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQG
        T+ ++Q A++++ +VMF A+  + QR   K R + R+ ++++R  ++ ++LLARAR+ P +S + SLA+  + EA+  IA+ P DAA HI++ALALD+ G
Subjt:  TDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQG

Query:  FKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTL---SPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLS
          TSAL+S D AL+    KSLS  E+ DAL+KRAE+K++ NRR  +DSA+ DL E+V L   +  A  +  LG+CYE K L+ +A+ A+ EAL  +P   
Subjt:  FKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTL---SPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLS

Query:  N
        N
Subjt:  N

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTGACCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTGATGTTCCTCGCTATGCATAACATTCCACAGAGATACTTTGCCAAGCTCCGATTGCGCTT
TCGATCTGACGTGGAATCCAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACGTCGTTAGCGGAAGAAGTCG
TAGCGGAAGCCAATAAGGCCATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAAGCTCTGGCTCTCGACATTCAAGGATTTAAAACCTCTGCTCTGGAATCT
CTCGATACGGCTCTGTCGCCGCTCGTCGCTAAGTCGCTCAGCGACGAGGAGCAAGGCGACGCGTTGCTCAAGCGAGCTGAGTTGAAGATGTCCACGAACCGGCGAGCCCT
AGTTGACTCGGCTTTGGCCGACTTGACCGAGTCCGTGACACTGAGTCCCAATGCAAATTCCTACTATTGGTTGGGGAAATGCTACGAGATCAAGAAACTGAGAGGAGAGG
CCAAGAAAGCATATGAAGAAGCTTTGAATATCGAACCACGATTATCCAACGCTCGGGAGGCATTGGAACGTCTATCATCATCGTAA

mRNA sequence

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Protein sequence

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MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALES
LDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSNAREALERLSSS

CcUC08G155690 (gene) of Watermelon (PI 537277) v1 genome