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CcUC08G160230 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC08G160230
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptioncalmodulin-like
Genome locationCicolChr08:28038371..28038697
RNA-Seq ExpressionCcUC08G160230
SyntenyCcUC08G160230
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060895.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]2.0e-1762.5Show/hide
Query:  MAMSSSQLKLTRD------EEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCID---EDEMEKPVDYCMKFQAPQ
        MAMS SQLKLTRD      EEHDVDGDG LTKQE+MQA+N+MG +MSF KAHY        GDG +D   EDE+EK VDY M+FQ P+
Subjt:  MAMSSSQLKLTRD------EEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCID---EDEMEKPVDYCMKFQAPQ

KGN62514.1 hypothetical protein Csa_021819 [Cucumis sativus]2.9e-1660.92Show/hide
Query:  MAMSSSQLKLTRD------EEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCID--EDEMEKPVDYCMKFQAPQ
        MAMS SQLKLTRD      EEHDVDGDG LTKQE+MQA+N+MG++MSF KAHY        GDG +D  E EME  +DY M+FQ P+
Subjt:  MAMSSSQLKLTRD------EEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCID--EDEMEKPVDYCMKFQAPQ

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]8.9e-1042.68Show/hide
Query:  MAMSSSQLKLTRDE------EHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCIDEDEMEKPVDYCMKFQ
        M+ ++++L+L+R++      EHD+DGDGRL+  E+++A    G+++ FYKAHY        GDG I+E+E++K VDY  KFQ
Subjt:  MAMSSSQLKLTRDE------EHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCIDEDEMEKPVDYCMKFQ

KGN62521.1 hypothetical protein Csa_021806 [Cucumis sativus]7.1e-1560Show/hide
Query:  MAMSSSQLKLTRD------EEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCIDED--EMEKPVDYCMKFQA
        MA S SQLKLTRD      EEHDVDGDGRLTKQE+MQA+N+MG +MSF KAHY        GDG +D +  E++  VDY M+FQA
Subjt:  MAMSSSQLKLTRD------EEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCIDED--EMEKPVDYCMKFQA

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]5.2e-1044.44Show/hide
Query:  AMSSSQLKLTRDE------EHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCIDEDEMEKPVDYCMKFQ
        A+ S++L+L+R++      EHD+DGDGRL+  E+++A    G+++ FYKAHY        GDG I+E+E++K VDY  KFQ
Subjt:  AMSSSQLKLTRDE------EHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCIDEDEMEKPVDYCMKFQ

TrEMBL top hitse value%identityAlignment
A0A0A0LNG3 Uncharacterized protein1.4e-1660.92Show/hide
Query:  MAMSSSQLKLTRD------EEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCID--EDEMEKPVDYCMKFQAPQ
        MAMS SQLKLTRD      EEHDVDGDG LTKQE+MQA+N+MG++MSF KAHY        GDG +D  E EME  +DY M+FQ P+
Subjt:  MAMSSSQLKLTRD------EEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCID--EDEMEKPVDYCMKFQAPQ

A0A0A0LRC1 Uncharacterized protein4.3e-1042.68Show/hide
Query:  MAMSSSQLKLTRDE------EHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCIDEDEMEKPVDYCMKFQ
        M+ ++++L+L+R++      EHD+DGDGRL+  E+++A    G+++ FYKAHY        GDG I+E+E++K VDY  KFQ
Subjt:  MAMSSSQLKLTRDE------EHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCIDEDEMEKPVDYCMKFQ

A0A0A0LRC3 EF-hand domain-containing protein3.4e-1560Show/hide
Query:  MAMSSSQLKLTRD------EEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCIDED--EMEKPVDYCMKFQA
        MA S SQLKLTRD      EEHDVDGDGRLTKQE+MQA+N+MG +MSF KAHY        GDG +D +  E++  VDY M+FQA
Subjt:  MAMSSSQLKLTRD------EEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCIDED--EMEKPVDYCMKFQA

A0A5A7UYC0 Putative calcium-binding protein CML105.7e-1043.9Show/hide
Query:  MAMSSSQLKLTRDE------EHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCIDEDEMEKPVDYCMKFQ
        M+ ++S+L+L+R++      EHD+DGDGRL+  E+++A    G+++ FYKAHY        GDG I+E+E++K VDY  KFQ
Subjt:  MAMSSSQLKLTRDE------EHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCIDEDEMEKPVDYCMKFQ

A0A5A7V4S6 Putative calcium-binding protein CML109.6e-1862.5Show/hide
Query:  MAMSSSQLKLTRD------EEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCID---EDEMEKPVDYCMKFQAPQ
        MAMS SQLKLTRD      EEHDVDGDG LTKQE+MQA+N+MG +MSF KAHY        GDG +D   EDE+EK VDY M+FQ P+
Subjt:  MAMSSSQLKLTRD------EEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHY-------VGDGCID---EDEMEKPVDYCMKFQAPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGTCAAGTTCTCAATTGAAGTTGACGAGGGATGAGGAGCATGATGTTGACGGAGATGGCCGCCTCACCAAGCAAGAGCTGATGCAAGCCATGAACACT
ATGGGCACTGTGATGTCCTTCTACAAAGCTCACTATGTTGGCGATGGCTGCATCGATGAAGATGAGATGGAGAAACCCGTTGATTATTGCATGAAGTTTCAAGCC
CCACAAAGAACCCGAAGGTCCCGAGGATCC
mRNA sequenceShow/hide mRNA sequence
AGGCTGCCCAGTTGGCCAACCCCACGTTCTCGAATCATTCGATGGCGATGTCAAGTTCTCAATTGAAGTTGACGAGGGATGAGGAGCATGATGTTGACGGAGATG
GCCGCCTCACCAAGCAAGAGCTGATGCAAGCCATGAACACTATGGGCACTGTGATGTCCTTCTACAAAGCTCACTATGTTGGCGATGGCTGCATCGATGAAGATG
AGATGGAGAAACCCGTTGATTATTGCATGAAGTTTCAAGCCCCACAAAGAACCCGAAGGTCCCGAGGATCC
Protein sequenceShow/hide protein sequence
MAMSSSQLKLTRDEEHDVDGDGRLTKQELMQAMNTMGTVMSFYKAHYVGDGCIDEDEMEKPVDYCMKFQAPQRTRRSRGS