; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G164530 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G164530
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPRONE domain-containing protein
Genome locationCicolChr09:1756662..1764611
RNA-Seq ExpressionCcUC09G164530
SyntenyCcUC09G164530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7843354.1 dynein light chain 1, cytoplasmic-like [Senna tora]1.1e-1547.92Show/hide
Query:  SIGDPNPLLLASFEINLIQSHTEARDDLQLRQGINQSSIGPNRCISNYSTNRIAVLREELRPVRKLPELVKIEALIELLFEVSVHRTSHQYTDGFH
        SI DPN LLL   ++N I S+TE RDDL+L QG+++  +G    +S+   + + V+ EEL P+R +PE  ++EALIELL EV VH   H++ DGFH
Subjt:  SIGDPNPLLLASFEINLIQSHTEARDDLQLRQGINQSSIGPNRCISNYSTNRIAVLREELRPVRKLPELVKIEALIELLFEVSVHRTSHQYTDGFH
KAG2379829.1 Rop guanine nucleotide exchange factor [Vigna angularis]1.1e-0739.09Show/hide
Query:  ATSSVKTSIGD-------PNPLLLASFEINLIQSHTEARDDLQLRQGINQSSIGPNRCISNYSTNRIAVLREELRPVRKLPELVKIEALIELLFEVSVHR
        A S V+  +G         N LL A   +NLI SH EAR DLQLRQ ++Q  I  +  +S++  +R  VL  +LR VR +P   ++ AL+ELL +V  H 
Subjt:  ATSSVKTSIGD-------PNPLLLASFEINLIQSHTEARDDLQLRQGINQSSIGPNRCISNYSTNRIAVLREELRPVRKLPELVKIEALIELLFEVSVHR

Query:  TSHQYTDGFH
        +  +Y+D  H
Subjt:  TSHQYTDGFH
TrEMBL top hitse value%identityAlignment
A0A444Y8Z4 Uncharacterized protein7.7e-0430.85Show/hide
Query:  NCSVGDIVGQNVGSISNPNPLLHTFFQINLIHSHTECGYDFQSGEGVNQISVGAGLSAANYCSDGLGLF----GVHGMLPKLEHLEPSFHFFFK
        N  VGD+VG++VG + + +  L  F ++NL+ S+T    + + GEGV+   V      A+ C++G+G+     G  G++P+ E +E      F+
Subjt:  NCSVGDIVGQNVGSISNPNPLLHTFFQINLIHSHTECGYDFQSGEGVNQISVGAGLSAANYCSDGLGLF----GVHGMLPKLEHLEPSFHFFFK
A0A444Y908 PRONE domain-containing protein7.7e-0430.85Show/hide
Query:  NCSVGDIVGQNVGSISNPNPLLHTFFQINLIHSHTECGYDFQSGEGVNQISVGAGLSAANYCSDGLGLF----GVHGMLPKLEHLEPSFHFFFK
        N  VGD+VG++VG + + +  L  F ++NL+ S+T    + + GEGV+   V      A+ C++G+G+     G  G++P+ E +E      F+
Subjt:  NCSVGDIVGQNVGSISNPNPLLHTFFQINLIHSHTECGYDFQSGEGVNQISVGAGLSAANYCSDGLGLF----GVHGMLPKLEHLEPSFHFFFK
A0A445CIF2 PRONE domain-containing protein7.7e-0430.85Show/hide
Query:  NCSVGDIVGQNVGSISNPNPLLHTFFQINLIHSHTECGYDFQSGEGVNQISVGAGLSAANYCSDGLGLF----GVHGMLPKLEHLEPSFHFFFK
        N  VGD+VG++VG + + +  L  F ++NL+ S+T    + + GEGV+   V      A+ C++G+G+     G  G++P+ E +E      F+
Subjt:  NCSVGDIVGQNVGSISNPNPLLHTFFQINLIHSHTECGYDFQSGEGVNQISVGAGLSAANYCSDGLGLF----GVHGMLPKLEHLEPSFHFFFK
A0A445CIF6 PRONE domain-containing protein7.7e-0430.85Show/hide
Query:  NCSVGDIVGQNVGSISNPNPLLHTFFQINLIHSHTECGYDFQSGEGVNQISVGAGLSAANYCSDGLGLF----GVHGMLPKLEHLEPSFHFFFK
        N  VGD+VG++VG + + +  L  F ++NL+ S+T    + + GEGV+   V      A+ C++G+G+     G  G++P+ E +E      F+
Subjt:  NCSVGDIVGQNVGSISNPNPLLHTFFQINLIHSHTECGYDFQSGEGVNQISVGAGLSAANYCSDGLGLF----GVHGMLPKLEHLEPSFHFFFK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAATTAACTCACAGGAGTTATGAGAGGATCATTCCTGAAATGTGCCTCCAAGTTGGCAATGACAAGATCCCACATGAGGAAGAAGAATTGTATTTTGAAGGTGA
AGTAATTGTTGAGGAACATGGGGCTCATTTCCAAAAACATCTAGTCCTGCTCCTCCTAAACGACCTTCGAGCAATGCCGAGACGAGCTCGGGCTCGTCGACATGAGCACC
TCCCAAGTCTAAGACAGTGGGGAAGATATGATCCGTACCTTGGTTGCCAATCCAAACTCGCGTTTGGGCCAGGATCCACTCCTAACGAACCGATCGCACTCACAAATCCG
CCTACAAACCCCTATGGCGAGTCCAATTGCAGCGTCGGCGACATCGTCGGTCAAAACGTCGGGAGTATTAGTAACCCTAATCCCCTTCTCCATACATTTTTTCAAATCAA
TCTTATCCACTCCCACACTGAATGTGGCTACGATTTCCAGAGCGGGGAAGGAGTCAATCAAATTAGCGTCGGCGCCGGACTGAGTGCTGCAAATTACTGCTCTGATGGAT
TGGGCTTGTTCGGAGTTCACGGGATGCTTCCAAAGCTTGAACACCTTGAACCGTCCTTCCACTTCTTCTTCAAGTTCGAGTTGCGCTTCCTATATGAGGCACCAGGACGA
CATTTTCAAGTGCAAAGAGCTCTTGGGGAACTTCAGGCTCATGCTCAAACACATCAAGCCCCGCACCGCCTAATCGGCCTTCAACCAGGGCAGCTACTAATTCGGTCACC
AATCTTCCACTTCCCGCTCCTGACATATCTATCGCACTCACACAACCTCCTCAGCACCGCTATAATCAACCCAATCGCCAAATCCGCAACATCTTCAGTTAAAACGAGTA
TTGGTGACCCGAATCCCCTTCTCCTTGCATCTTTTGAGATCAATCTTATCCAATCCCACACTGAAGCTCGAGACGATCTCCAACTTCGGCAAGGCATCAATCAAAGTAGC
ATCGGCCCCAACCGCTGCATTTCCAACTACAGCACGAATCGAATTGCAGTGCTCCGCGAGGAATTGCGTCCTGTGAGGAAACTGCCAGAACTTGTAAAGATTGAAGCGCT
TATCGAGCTCCTGTTCGAGGTAAGTGTTCATCGGACAAGTCATCAGTACACCGATGGATTCCATGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAATTAACTCACAGGAGTTATGAGAGGATCATTCCTGAAATGTGCCTCCAAGTTGGCAATGACAAGATCCCACATGAGGAAGAAGAATTGTATTTTGAAGGTGA
AGTAATTGTTGAGGAACATGGGGCTCATTTCCAAAAACATCTAGTCCTGCTCCTCCTAAACGACCTTCGAGCAATGCCGAGACGAGCTCGGGCTCGTCGACATGAGCACC
TCCCAAGTCTAAGACAGTGGGGAAGATATGATCCGTACCTTGGTTGCCAATCCAAACTCGCGTTTGGGCCAGGATCCACTCCTAACGAACCGATCGCACTCACAAATCCG
CCTACAAACCCCTATGGCGAGTCCAATTGCAGCGTCGGCGACATCGTCGGTCAAAACGTCGGGAGTATTAGTAACCCTAATCCCCTTCTCCATACATTTTTTCAAATCAA
TCTTATCCACTCCCACACTGAATGTGGCTACGATTTCCAGAGCGGGGAAGGAGTCAATCAAATTAGCGTCGGCGCCGGACTGAGTGCTGCAAATTACTGCTCTGATGGAT
TGGGCTTGTTCGGAGTTCACGGGATGCTTCCAAAGCTTGAACACCTTGAACCGTCCTTCCACTTCTTCTTCAAGTTCGAGTTGCGCTTCCTATATGAGGCACCAGGACGA
CATTTTCAAGTGCAAAGAGCTCTTGGGGAACTTCAGGCTCATGCTCAAACACATCAAGCCCCGCACCGCCTAATCGGCCTTCAACCAGGGCAGCTACTAATTCGGTCACC
AATCTTCCACTTCCCGCTCCTGACATATCTATCGCACTCACACAACCTCCTCAGCACCGCTATAATCAACCCAATCGCCAAATCCGCAACATCTTCAGTTAAAACGAGTA
TTGGTGACCCGAATCCCCTTCTCCTTGCATCTTTTGAGATCAATCTTATCCAATCCCACACTGAAGCTCGAGACGATCTCCAACTTCGGCAAGGCATCAATCAAAGTAGC
ATCGGCCCCAACCGCTGCATTTCCAACTACAGCACGAATCGAATTGCAGTGCTCCGCGAGGAATTGCGTCCTGTGAGGAAACTGCCAGAACTTGTAAAGATTGAAGCGCT
TATCGAGCTCCTGTTCGAGGTAAGTGTTCATCGGACAAGTCATCAGTACACCGATGGATTCCATGGTTGA
Protein sequenceShow/hide protein sequence
MKKLTHRSYERIIPEMCLQVGNDKIPHEEEELYFEGEVIVEEHGAHFQKHLVLLLLNDLRAMPRRARARRHEHLPSLRQWGRYDPYLGCQSKLAFGPGSTPNEPIALTNP
PTNPYGESNCSVGDIVGQNVGSISNPNPLLHTFFQINLIHSHTECGYDFQSGEGVNQISVGAGLSAANYCSDGLGLFGVHGMLPKLEHLEPSFHFFFKFELRFLYEAPGR
HFQVQRALGELQAHAQTHQAPHRLIGLQPGQLLIRSPIFHFPLLTYLSHSHNLLSTAIINPIAKSATSSVKTSIGDPNPLLLASFEINLIQSHTEARDDLQLRQGINQSS
IGPNRCISNYSTNRIAVLREELRPVRKLPELVKIEALIELLFEVSVHRTSHQYTDGFHG