; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G164800 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G164800
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionthionin-like protein 2
Genome locationCicolChr09:1953102..1954732
RNA-Seq ExpressionCcUC09G164800
SyntenyCcUC09G164800
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575553.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1744.72Show/hide
Query:  MKSFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTN
        MK+ +V CL+LS +V            VG    +   GG +C   C   C     +CA+CIGKC+I  V S    +N  DN  FCKLGC+TSRC K L N
Subjt:  MKSFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTN

Query:  GHPDDQKMEGCVNSCSQTCSNPM
         HP++++M+GCVNSCS TC+N M
Subjt:  GHPDDQKMEGCVNSCSQTCSNPM

KAG6575558.1 hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sororia]4.9e-1552.33Show/hide
Query:  GGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGHPDDQKMEGCVNSCSQTCSNPM
        GG +C   C   C     +CA+CIGKC+I  V S    +N  DN  FCKLGC+TSRC K L N HP++++M+GCVNSCS TC+N M
Subjt:  GGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGHPDDQKMEGCVNSCSQTCSNPM

KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]7.1e-1445.53Show/hide
Query:  MKSFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLIC-LTGPVKCALCIGKCL---IFPVFSAREGSNQGDNLSFCKLGCATSRCTK
        MKS VV+C ILSL+ G                 ST S G  C   C ++C +T  V    C GKCL   +FP  SA    N  D   FCKLGCATS CTK
Subjt:  MKSFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLIC-LTGPVKCALCIGKCL---IFPVFSAREGSNQGDNLSFCKLGCATSRCTK

Query:  FLTNGHPDDQKMEGCVNSCSQTC
        F T   P ++K+E CVNSCS+TC
Subjt:  FLTNGHPDDQKMEGCVNSCSQTC

KAG7014099.1 hypothetical protein SDJN02_24272, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1745.53Show/hide
Query:  MKSFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTN
        MK+ +V CL+LS +V            VG    +   GG +C   C   CL    +CA+CIGKC+I  V S    +N  DN  FCKLGC+TSRC K L N
Subjt:  MKSFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTN

Query:  GHPDDQKMEGCVNSCSQTCSNPM
         HP++++M+GCVNSCS TC+N M
Subjt:  GHPDDQKMEGCVNSCSQTCSNPM

XP_008461038.1 PREDICTED: beta-hordothionin-like [Cucumis melo]4.3e-1945.74Show/hide
Query:  MKSFVVLCLILSLIVGTGRAEDSGFSGVGKG-GDSTVSGGIDCLVMCGL-ICLTGPVKCALCIGKCLIFPVFSAREG-SNQGDNLSFCKLGCATSRCTKF
        MKS  VLCLILSL+V  G++E     G G G G+   +G   C + C L  C  G  +CA+C+GKC +    S+    SN+ DN  FCK+GC TS CTKF
Subjt:  MKSFVVLCLILSLIVGTGRAEDSGFSGVGKG-GDSTVSGGIDCLVMCGL-ICLTGPVKCALCIGKCLIFPVFSAREG-SNQGDNLSFCKLGCATSRCTKF

Query:  L--TNGHPDDQKMEGCVNSCSQTCSNPMY
            N H D+++++GCV+SCSQ C++ MY
Subjt:  L--TNGHPDDQKMEGCVNSCSQTCSNPMY

TrEMBL top hitse value%identityAlignment
A0A1S3CDB8 beta-hordothionin-like2.1e-1945.74Show/hide
Query:  MKSFVVLCLILSLIVGTGRAEDSGFSGVGKG-GDSTVSGGIDCLVMCGL-ICLTGPVKCALCIGKCLIFPVFSAREG-SNQGDNLSFCKLGCATSRCTKF
        MKS  VLCLILSL+V  G++E     G G G G+   +G   C + C L  C  G  +CA+C+GKC +    S+    SN+ DN  FCK+GC TS CTKF
Subjt:  MKSFVVLCLILSLIVGTGRAEDSGFSGVGKG-GDSTVSGGIDCLVMCGL-ICLTGPVKCALCIGKCLIFPVFSAREG-SNQGDNLSFCKLGCATSRCTKF

Query:  L--TNGHPDDQKMEGCVNSCSQTCSNPMY
            N H D+++++GCV+SCSQ C++ MY
Subjt:  L--TNGHPDDQKMEGCVNSCSQTCSNPMY

A0A2H5Q5I4 Uncharacterized protein4.2e-1236.44Show/hide
Query:  SFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGH
        S +++CL+L L+VG   A                    DC  +C + C+ G      C  KCL   V  A    N  D   FCKLGCA+S CT   T   
Subjt:  SFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGH

Query:  PDDQKMEGCVNSCSQTCS
        P ++K+E CVNSCS+TC+
Subjt:  PDDQKMEGCVNSCSQTCS

A0A6J1KDK0 thionin-like protein 27.7e-1445.08Show/hide
Query:  MKSFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLIC-LTGPVKCALCIGKCLIFPVF--SAREGSNQGDNLSFCKLGCATSRCTKF
        MKS VV+C ILSL+ G                 ST S G  C   C ++C +T  V    C GKCL   +F  SA    N  D   FCKLGCATS CTKF
Subjt:  MKSFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLIC-LTGPVKCALCIGKCLIFPVF--SAREGSNQGDNLSFCKLGCATSRCTKF

Query:  LTNGHPDDQKMEGCVNSCSQTC
         T   P ++K+E CVNSCS+TC
Subjt:  LTNGHPDDQKMEGCVNSCSQTC

B9SQB5 Uncharacterized protein1.4e-1033.9Show/hide
Query:  SFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGH
        SF+++C+++ ++ G   A    F    K          DCLV C +   T P+  A C+ KC+I P ++    +       FC +GCATS C+K +TN +
Subjt:  SFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGH

Query:  PDDQKMEGCVNSCSQTCS
        P+ +++E CVN CS TC+
Subjt:  PDDQKMEGCVNSCSQTCS

V4ULM8 Uncharacterized protein4.2e-1236.44Show/hide
Query:  SFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGH
        S +++CL+L L+VG   A                    DC  +C + C+ G      C  KCL   V  A    N  D   FCKLGCA+S CT   T   
Subjt:  SFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGH

Query:  PDDQKMEGCVNSCSQTCS
        P ++K+E CVNSCS+TC+
Subjt:  PDDQKMEGCVNSCSQTCS

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 21.6e-0531.4Show/hide
Query:  DCLVMCGLICLTGP-----VKCAL-CIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGHPDDQKMEGCVNSCSQTCS
        +C   C + C  G      +KC   C  +CL  P   +   +N  ++  FCKLGCAT  C    +  +P+ +++  CV+SCS  C+
Subjt:  DCLVMCGLICLTGP-----VKCAL-CIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGHPDDQKMEGCVNSCSQTCS

P01544 Alpha-1-purothionin (Fragment)3.1e-0426.67Show/hide
Query:  KGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGHPDDQKMEGCVNSCSQTC
        +G     +G   C +  GL C  G             FP  +    S++ D + +C LGC +S C  ++ N   DD++M+  V +C+  C
Subjt:  KGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGHPDDQKMEGCVNSCSQTC

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.1.2e-0631.4Show/hide
Query:  DCLVMCGLICLTGP-----VKCAL-CIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGHPDDQKMEGCVNSCSQTCS
        +C   C + C  G      +KC   C  +CL  P   +   +N  ++  FCKLGCAT  C    +  +P+ +++  CV+SCS  C+
Subjt:  DCLVMCGLICLTGP-----VKCAL-CIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGHPDDQKMEGCVNSCSQTCS

AT1G12672.1 unknown protein2.2e-0534.48Show/hide
Query:  LIFPVFSAREGSNQ-GDNLSFCKLGCATSRCTKFLTNGHPDDQKMEGCVNSCSQTCSN
        L+  + +  + +N+   N  +CKLGC+T  C    +  +P+  K+  CV+SCS  CSN
Subjt:  LIFPVFSAREGSNQ-GDNLSFCKLGCATSRCTKFLTNGHPDDQKMEGCVNSCSQTCSN

AT1G12672.2 unknown protein6.9e-0736.76Show/hide
Query:  PVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGHPDDQKMEGCVNSCSQTCSN
        P K   CI  CL  P       +    N  +CKLGC+T  C    +  +P+  K+  CV+SCS  CSN
Subjt:  PVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGHPDDQKMEGCVNSCSQTCSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCATTTGTGGTCCTTTGCTTGATTCTGAGCTTAATTGTGGGCACCGGCAGGGCCGAAGACTCGGGCTTCTCCGGCGTCGGTAAGGGCGGCGACTCCACC
GTGTCGGGCGGCATAGATTGCCTTGTCATGTGCGGCTTGATCTGCTTAACTGGTCCTGTCAAGTGTGCACTTTGTATTGGAAAATGTTTAATATTTCCGGTGTTC
TCTGCCCGGGAAGGATCCAACCAAGGGGACAATCTCTCCTTCTGCAAGCTTGGCTGTGCTACTTCTCGCTGCACCAAGTTCCTCACCAATGGTCACCCAGATGAT
CAGAAAATGGAAGGTTGTGTTAACTCCTGCTCTCAAACATGCTCAAACCCTATGTATTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAGAAAACATAAAACACAAAGCCAAGTCCCAAAAAGTTTGAAAATTAATTAAAAAAAGTGAAGAGAAAATGAAGTCATTTGTGGTCCTTTGCTTGATTCTG
AGCTTAATTGTGGGCACCGGCAGGGCCGAAGACTCGGGCTTCTCCGGCGTCGGTAAGGGCGGCGACTCCACCGTGTCGGGCGGCATAGATTGCCTTGTCATGTGC
GGCTTGATCTGCTTAACTGGTCCTGTCAAGTGTGCACTTTGTATTGGAAAATGTTTAATATTTCCGGTGTTCTCTGCCCGGGAAGGATCCAACCAAGGGGACAAT
CTCTCCTTCTGCAAGCTTGGCTGTGCTACTTCTCGCTGCACCAAGTTCCTCACCAATGGTCACCCAGATGATCAGAAAATGGAAGGTTGTGTTAACTCCTGCTCT
CAAACATGCTCAAACCCTATGTATTGATGAAGGAGGACACAAAATAATTAAGCTGGAATTGGCTTTAAAATACTATGAATAAATGAATGTCAATATTGGTGAAAA
TCAACCATTTGACTGTAATATAAAGCTAATCCCATATTAAATTAAGCCATGGATTGATTATTGAGATTTTAACCATATAATTAGATTGTAATTAATACGTTTCAA
TAGTTATATTCTTAAATAATTAGATAAATGATAAAAGAAAATTAAATAATTTCCTAATTTT
Protein sequenceShow/hide protein sequence
MKSFVVLCLILSLIVGTGRAEDSGFSGVGKGGDSTVSGGIDCLVMCGLICLTGPVKCALCIGKCLIFPVFSAREGSNQGDNLSFCKLGCATSRCTKFLTNGHPDD
QKMEGCVNSCSQTCSNPMY