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CcUC09G164810 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G164810
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionthionin-like protein 2
Genome locationCicolChr09:1961090..1962793
RNA-Seq ExpressionCcUC09G164810
SyntenyCcUC09G164810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575553.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]5.7e-2149.14Show/hide
Query:  MKSILVFCLVVSLVVVVKSEGAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDERE
        MK++LV CLV+S VVV  SE        GG +CY  CI N C +  FQCA+CIGKC I++ES  M+   MDNR FCK+GCSTS C+K  ++   + +E++
Subjt:  MKSILVFCLVVSLVVVVKSEGAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDERE

Query:  VKACLNSCNQRCTDNM
        +K C+NSC+  CT+ M
Subjt:  VKACLNSCNQRCTDNM

KAG6575558.1 hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1750Show/hide
Query:  GGGSCYLSCILNDCQKDVFQCAVCIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDEREVKACLNSCNQRCTDNM
        GG +CY  CI N C +  FQCA+CIGKC I++ES  M+   MDNR FCK+GCSTS C+K  ++   + +E+++K C+NSC+  CT+ M
Subjt:  GGGSCYLSCILNDCQKDVFQCAVCIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDEREVKACLNSCNQRCTDNM

KAG7014099.1 hypothetical protein SDJN02_24272, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-2149.14Show/hide
Query:  MKSILVFCLVVSLVVVVKSEGAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDERE
        MK++LV CLV+S VVV  SE        GG +CY  CI N C +  FQCA+CIGKC I++ES  M+   MDNR FCK+GCSTS C+K  ++   + +E++
Subjt:  MKSILVFCLVVSLVVVVKSEGAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDERE

Query:  VKACLNSCNQRCTDNM
        +K C+NSC+  CT+ M
Subjt:  VKACLNSCNQRCTDNM

XP_008461038.1 PREDICTED: beta-hordothionin-like [Cucumis melo]3.3e-3760.16Show/hide
Query:  MKSILVFCLVVSLVVVVKSE---------GAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAI--NLESYSMKDRQMDNRDFCKIGCSTSVCSKFA
        MKSI V CL++SL+VV KSE         G+GNGN  G   CY+SC+LNDC+K VFQCAVC+GKCA+     SYS +  +MDN DFCKIGC+TS+C+KFA
Subjt:  MKSILVFCLVVSLVVVVKSE---------GAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAI--NLESYSMKDRQMDNRDFCKIGCSTSVCSKFA

Query:  ISDNQYSDEREVKACLNSCNQRCTDNMY
        + +NQ+SDE+EVK C++SC+QRCTD+MY
Subjt:  ISDNQYSDEREVKACLNSCNQRCTDNMY

XP_038897055.1 thionin-like protein 2 [Benincasa hispida]1.4e-0633.33Show/hide
Query:  MKSILVFCLVVSLVVVVKSEGAGNGNVGGGGSCYLSCILNDCQKD----VFQCAV-CIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQY
        MKS++V CL++SLV           +      CY  C      K     +  CA  C+ +C IN  S +M    MD   FCK+GC+TS+C+ F+   +  
Subjt:  MKSILVFCLVVSLVVVVKSEGAGNGNVGGGGSCYLSCILNDCQKD----VFQCAV-CIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQY

Query:  SDEREVKACLNSCNQRC
         D  +VK+C++SC+++C
Subjt:  SDEREVKACLNSCNQRC

TrEMBL top hitse value%identityAlignment
A0A1Q3AR00 Uncharacterized protein5.5e-0628.7Show/hide
Query:  MKSILVFCLVVSLVVVVKSEGAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDERE
        +KSI++ CLV+ L+V        N        CY  C+L           +C  KC  +       D      ++CK+GC++S+C+  +  +N    E +
Subjt:  MKSILVFCLVVSLVVVVKSEGAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDERE

Query:  VKACLNSCNQRCTDN
        V+AC++SC++ CT N
Subjt:  VKACLNSCNQRCTDN

A0A1S3CDB8 beta-hordothionin-like1.6e-3760.16Show/hide
Query:  MKSILVFCLVVSLVVVVKSE---------GAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAI--NLESYSMKDRQMDNRDFCKIGCSTSVCSKFA
        MKSI V CL++SL+VV KSE         G+GNGN  G   CY+SC+LNDC+K VFQCAVC+GKCA+     SYS +  +MDN DFCKIGC+TS+C+KFA
Subjt:  MKSILVFCLVVSLVVVVKSE---------GAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAI--NLESYSMKDRQMDNRDFCKIGCSTSVCSKFA

Query:  ISDNQYSDEREVKACLNSCNQRCTDNMY
        + +NQ+SDE+EVK C++SC+QRCTD+MY
Subjt:  ISDNQYSDEREVKACLNSCNQRCTDNMY

A0A5E4GD16 PREDICTED: thionin1.2e-0535.29Show/hide
Query:  GSCYLSCILNDCQKDVFQCAV-CIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDEREVKACLNSCNQRCTD
        G+C+  CI+ND   +  +C + C+ KC +  E       Q ++  FCK+GC+TS+C+  +  DN   +E +VK C++SC+  CT+
Subjt:  GSCYLSCILNDCQKDVFQCAV-CIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDEREVKACLNSCNQRCTD

A0A6J1KDK0 thionin-like protein 28.6e-0732.17Show/hide
Query:  MKSILVFCLVVSLVVVVKSEGAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAINLESYSMKDRQMDNRD---FCKIGCSTSVCSKFAISDNQYSD
        MKS++V C ++SLV       AG  +    G CY  C +            C GKC  +    +   R +++ D   FCK+GC+TS+C+KF+   +    
Subjt:  MKSILVFCLVVSLVVVVKSEGAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAINLESYSMKDRQMDNRD---FCKIGCSTSVCSKFAISDNQYSD

Query:  EREVKACLNSCNQRC
        E++V++C+NSC++ C
Subjt:  EREVKACLNSCNQRC

M5XBV6 Uncharacterized protein2.8e-0534.12Show/hide
Query:  GSCYLSCILNDCQKDVFQCAV-CIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDEREVKACLNSCNQRCTD
        G+C+  CI+N  + +  +C + C+ KC +  E       Q ++  FCK+GC+TS+C+  +  DN   +E +VK C++SC+  CT+
Subjt:  GSCYLSCILNDCQKDVFQCAV-CIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDEREVKACLNSCNQRCTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCAATTTTGGTATTTTGCTTGGTCGTGAGCTTAGTAGTTGTAGTGAAGTCGGAAGGCGCCGGCAACGGCAACGTTGGCGGCGGCGGAAGTTGCTATTTA
AGCTGCATACTGAATGACTGCCAAAAGGATGTGTTCCAATGTGCAGTTTGCATCGGAAAATGTGCAATAAACTTGGAGTCTTACTCAATGAAGGATAGACAAATG
GACAATCGTGATTTCTGCAAGATTGGCTGTTCCACTTCTGTCTGCTCCAAGTTCGCCATCTCCGACAACCAATACTCAGATGAGAGGGAAGTGAAAGCTTGTCTA
AATTCGTGCAATCAAAGATGCACGGACAATATGTATTAA
mRNA sequenceShow/hide mRNA sequence
TTATGATATGATTCCCAAAGAAGGCAAAAGAGAAATTAATAGAAACCCAGAAAGGTGAGAGAGTTTGGGAAGTTAAGGTTGAAAAGAGGAAAAATGAAGTCAATT
TTGGTATTTTGCTTGGTCGTGAGCTTAGTAGTTGTAGTGAAGTCGGAAGGCGCCGGCAACGGCAACGTTGGCGGCGGCGGAAGTTGCTATTTAAGCTGCATACTG
AATGACTGCCAAAAGGATGTGTTCCAATGTGCAGTTTGCATCGGAAAATGTGCAATAAACTTGGAGTCTTACTCAATGAAGGATAGACAAATGGACAATCGTGAT
TTCTGCAAGATTGGCTGTTCCACTTCTGTCTGCTCCAAGTTCGCCATCTCCGACAACCAATACTCAGATGAGAGGGAAGTGAAAGCTTGTCTAAATTCGTGCAAT
CAAAGATGCACGGACAATATGTATTAAGGAGAAGGGCGGAGACGGAGGAGGCTGGGATTGGCTTTCAAATATACTATGAATAAATAAATGTCAATATTGGTGTTA
AAAAACCATTATTTGGCTATAATTAAGCTAATCCCAGATTAAGTTATGATATGTACTTTCAAGTTTCTACCTATACCCATCAATAAATATATGTGAAATATAGGG
TTGCTTTATCCTATATTTTTGTGTGAC
Protein sequenceShow/hide protein sequence
MKSILVFCLVVSLVVVVKSEGAGNGNVGGGGSCYLSCILNDCQKDVFQCAVCIGKCAINLESYSMKDRQMDNRDFCKIGCSTSVCSKFAISDNQYSDEREVKACL
NSCNQRCTDNMY