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CcUC09G164840 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G164840
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionthionin-like protein 2
Genome locationCicolChr09:1981697..1985615
RNA-Seq ExpressionCcUC09G164840
SyntenyCcUC09G164840
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461039.1 PREDICTED: thionin-like protein 2 [Cucumis melo]2.9e-2259.38Show/hide
Query:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS----TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNP
        +A KW LM WLLL+SLS ANS +F +CY +CFV+CAITPGV+F DCP RCL +C+ PS      +     + QN FFC LGCA SSCT FSTK NP
Subjt:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS----TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNP

XP_011659556.1 thionin-like protein 2 [Cucumis sativus]1.0e-2260.42Show/hide
Query:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS----TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNP
        +A KW LM WLLL+SLS ANS +F +CY +CFV+CAITPGV+F DCP RCL +C+ PS      +     Q QN FFC LGCA SSCT FSTK NP
Subjt:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS----TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNP

XP_023547567.1 thionin-like protein 2 [Cucurbita pepo subsp. pepo]3.8e-2261.62Show/hide
Query:  SMAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS--TKNA---KFHHQHQNQFFCNLGCATSSCTNFSTKDNPA
        S   K GLM WL+LSSL+ ANS +F +CY +CFV+CAITPGV+F DCP RCL +C+ PS    NA     H Q +NQFFC LGCATSSCT FST  NPA
Subjt:  SMAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS--TKNA---KFHHQHQNQFFCNLGCATSSCTNFSTKDNPA

XP_038896425.1 thionin-like protein 2 [Benincasa hispida]3.8e-2257.28Show/hide
Query:  SSMAMKWGLMGWLLLSSLSMANSN------FLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMS-PSTKNAKFH--HQHQNQFFCNLGCATSSCTNFSTKD
        SSMAMKW LM  LLLSSLS+ANS       F +CY SCF +C++ P +   DCP RCLHSC++ PS  NA+FH   Q  +QF+C LGCATS+CT F TK+
Subjt:  SSMAMKWGLMGWLLLSSLSMANSN------FLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMS-PSTKNAKFH--HQHQNQFFCNLGCATSSCTNFSTKD

Query:  NPA
         PA
Subjt:  NPA

XP_038899383.1 thionin-like protein 2 [Benincasa hispida]1.3e-2566.32Show/hide
Query:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNPA
        MA KW L+ WLLLSSLS ANS +F +CY +CFV+CAITPGV+F DCP RCL +C+ PS    N   H Q QNQFFC LGCA SSCT FSTK NPA
Subjt:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNPA

TrEMBL top hitse value%identityAlignment
A0A0A0K781 Uncharacterized protein4.9e-2360.42Show/hide
Query:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS----TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNP
        +A KW LM WLLL+SLS ANS +F +CY +CFV+CAITPGV+F DCP RCL +C+ PS      +     Q QN FFC LGCA SSCT FSTK NP
Subjt:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS----TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNP

A0A1S3CDU4 thionin-like protein 21.4e-2259.38Show/hide
Query:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS----TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNP
        +A KW LM WLLL+SLS ANS +F +CY +CFV+CAITPGV+F DCP RCL +C+ PS      +     + QN FFC LGCA SSCT FSTK NP
Subjt:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS----TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNP

A0A6J1CW29 thionin-like protein 28.3e-1547.57Show/hide
Query:  KWGL---MGWLLLSSLSMA---NSNFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS--------TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKD
        KWGL   M WL++ S  M    +++F +CY +CFV+CAITPG SF +CP +CL +C+ PS        T  A     H N FFC LGCA + CTNF+T  
Subjt:  KWGL---MGWLLLSSLSMA---NSNFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS--------TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKD

Query:  NPA
        NPA
Subjt:  NPA

A0A6J1GMH5 thionin-like protein 27.0e-2258Show/hide
Query:  SMAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS------TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNPA
        S   K GLM WL+LSSL+ ANS +F +CY +CFV+CAITPGV+F DCP RCL +C+ PS        +   H Q +NQFFC LGCA SSCT FST  NPA
Subjt:  SMAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS------TKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNPA

A0A6J1JZ84 thionin-like protein 21.2e-2159.6Show/hide
Query:  SMAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS--TKNA---KFHHQHQNQFFCNLGCATSSCTNFSTKDNPA
        S   K GLM WL+LSSL+ ANS +F +CY +CF++CAITPGV+F DCP RCL +C+ PS    NA     H Q +NQFFC LGCA SSCT FST+ NPA
Subjt:  SMAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPS--TKNA---KFHHQHQNQFFCNLGCATSSCTNFSTKDNPA

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 22.0e-0532.93Show/hide
Query:  LLSSLSMANSNFLDCYHSCFVMC-AITPGVSFLDCPSRCLHSCM-SPSTKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNP
        LL+  +     F +CY +C V C A +    +L CP  C   C+  PS  +   ++  ++ +FC LGCAT  C + S+  NP
Subjt:  LLSSLSMANSNFLDCYHSCFVMC-AITPGVSFLDCPSRCLHSCM-SPSTKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNP

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.1.4e-0632.93Show/hide
Query:  LLSSLSMANSNFLDCYHSCFVMC-AITPGVSFLDCPSRCLHSCM-SPSTKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNP
        LL+  +     F +CY +C V C A +    +L CP  C   C+  PS  +   ++  ++ +FC LGCAT  C + S+  NP
Subjt:  LLSSLSMANSNFLDCYHSCFVMC-AITPGVSFLDCPSRCLHSCM-SPSTKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCAGCAGCATGGCAATGAAATGGGGTTTAATGGGTTGGCTGTTGCTGTCCTCGCTCTCCATGGCCAATTCCAATTTTCTAGATTGCTACCACTCCTGC
TTCGTCATGTGCGCCATCACGCCCGGCGTCTCCTTCCTCGACTGCCCCTCCAGATGCTTGCATTCTTGCATGTCCCCATCTACCAAAAACGCCAAGTTCCATCAC
CAACATCAGAATCAGTTCTTCTGCAACCTCGGTTGCGCAACTTCCTCCTGTACCAACTTTAGCACAAAGGACAATCCAGCTGGGTCTCCATGGCCAATTCCGAAT
CTATTCAAGACTGCTACAGCACCTGCTTCGTGGTATGCGCCGTCACGCCCGGCATCTCCTTCTCCGACTGCCCGTCGAGATGCCTGCATTCTTGCATCACCCCCT
CTAATTCTTCCATGGGCAACACCGATGTCCATTCTCAACAAAAAAATCATTTCTACTGCGAGCTCGGCTGTGCAACTTCCTGGTGTACCAAGTACAGCACAAAGG
AGAATCCAGCTGCCAAAGAAGTGGGGAGCTGTGTGGATTCTTGCTCTCATACATGTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCAGCAGCATGGCAATGAAATGGGGTTTAATGGGTTGGCTGTTGCTGTCCTCGCTCTCCATGGCCAATTCCAATTTTCTAGATTGCTACCACTCCTGC
TTCGTCATGTGCGCCATCACGCCCGGCGTCTCCTTCCTCGACTGCCCCTCCAGATGCTTGCATTCTTGCATGTCCCCATCTACCAAAAACGCCAAGTTCCATCAC
CAACATCAGAATCAGTTCTTCTGCAACCTCGGTTGCGCAACTTCCTCCTGTACCAACTTTAGCACAAAGGACAATCCAGCTGGGTCTCCATGGCCAATTCCGAAT
CTATTCAAGACTGCTACAGCACCTGCTTCGTGGTATGCGCCGTCACGCCCGGCATCTCCTTCTCCGACTGCCCGTCGAGATGCCTGCATTCTTGCATCACCCCCT
CTAATTCTTCCATGGGCAACACCGATGTCCATTCTCAACAAAAAAATCATTTCTACTGCGAGCTCGGCTGTGCAACTTCCTGGTGTACCAAGTACAGCACAAAGG
AGAATCCAGCTGCCAAAGAAGTGGGGAGCTGTGTGGATTCTTGCTCTCATACATGTTCCTTGA
Protein sequenceShow/hide protein sequence
MESSSMAMKWGLMGWLLLSSLSMANSNFLDCYHSCFVMCAITPGVSFLDCPSRCLHSCMSPSTKNAKFHHQHQNQFFCNLGCATSSCTNFSTKDNPAGSPWPIPN
LFKTATAPASWYAPSRPASPSPTARRDACILASPPLILPWATPMSILNKKIISTASSAVQLPGVPSTAQRRIQLPKKWGAVWILALIHVP