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CcUC09G166310 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G166310
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr09:3112492..3112875
RNA-Seq ExpressionCcUC09G166310
SyntenyCcUC09G166310
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575655.1 E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia]3.7e-5889.76Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV
        MA NG SS +NS SQPTFPLHLCFFFLILFMFL+FSW+S YESAVEGVFDQLKLLLIVSPLLLLLLVHWLSN ENGRLPPL+ LPEKDSLHRAGGTPWGV
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFPLLSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

XP_022953918.1 uncharacterized protein LOC111456323 [Cucurbita moschata]9.7e-5989.76Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV
        MA NG SS +NS SQPTFPLHLCFFFLILFMFL+FSW+S YESAVEGVFDQLKLLLIVSPLLLLLL+HWLSN ENGRLPPL+PLPEKDSLHRAGGTPWGV
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFPLLSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

XP_022991944.1 uncharacterized protein LOC111488435 [Cucurbita maxima]3.3e-5989.76Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV
        MA NG SS  NS SQPTFPLHLCFFFLILFMFL+FSWYS YESAVEGVFDQLKLLLI+SPLLLLLLVHWLSN ENGRLPPL+PLPEKDSLHRAGGTPWGV
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFP+LSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

XP_023548678.1 uncharacterized protein LOC111807266 [Cucurbita pepo subsp. pepo]1.5e-5991.34Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV
        MA NG SSA+NS SQPTFPLHLCFFFLILFMFL+FSW+S YESAVEGVFDQLKLLLIVSPLLLLLLVHWLSN ENGRLPPL+PLPEKDSLHRAGGTPWGV
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFPLLSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

XP_038898802.1 uncharacterized protein LOC120086305 [Benincasa hispida]1.2e-6195.28Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV
        MA+N GSSAANSHSQPTFPLHLCFFFLIL MFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLL+VHWLSNTENGRLP LIPLPE+DSLHRAGGTPWGV
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GFLLVLLLFMISYQSYFQERWFPLLSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

TrEMBL top hitse value%identityAlignment
A0A0A0K9W6 Uncharacterized protein3.7e-5693.22Show/hide
Query:  ANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLLF
        AN+HSQPTFPLHLCFFFLIL MFLSFSWYSNYESAVE VFDQLKLLLIVSPLLLLLLVHWLSNT++G LP LIPLPEKDSLHRAGGTPWGVGFLLVLLLF
Subjt:  ANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLLF

Query:  MISYQSYFQERWFPLLSR
        M+SYQSYFQERWFPLLSR
Subjt:  MISYQSYFQERWFPLLSR

A0A1S3CE82 uncharacterized protein LOC1034998793.1e-5592.44Show/hide
Query:  AANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLL
        A   HSQPTFPLHLCFFFLIL MFLSFSWYSNYESAVE VFDQLKLLLIVSPLLLLLLVHWLSNT+NG LP LIPLPEK+SLHRAGGTPWGVGFLLVLLL
Subjt:  AANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLL

Query:  FMISYQSYFQERWFPLLSR
        FMISYQSYFQERWFPLLSR
Subjt:  FMISYQSYFQERWFPLLSR

A0A6J1GPN5 uncharacterized protein LOC1114563234.7e-5989.76Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV
        MA NG SS +NS SQPTFPLHLCFFFLILFMFL+FSW+S YESAVEGVFDQLKLLLIVSPLLLLLL+HWLSN ENGRLPPL+PLPEKDSLHRAGGTPWGV
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFPLLSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

A0A6J1H718 uncharacterized protein LOC1114606925.4e-5589.76Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV
        MAANGGSSAANSHSQPTFPLHLCFFFLIL MFLSFSWYSNYES VEGVFDQLKLLLIVSPLLLLLLVHWLSN  N        LPEKDSLH AGGTPWGV
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GFLLVLLLFMISYQSYFQERWFPLLSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

A0A6J1JW83 uncharacterized protein LOC1114884351.6e-5989.76Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV
        MA NG SS  NS SQPTFPLHLCFFFLILFMFL+FSWYS YESAVEGVFDQLKLLLI+SPLLLLLLVHWLSN ENGRLPPL+PLPEKDSLHRAGGTPWGV
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFP+LSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein3.3e-1235.71Show/hide
Query:  SSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHR-----------AGG
        SS  +S S    P  +     +  +FL  SWY + E A E   +Q+   L++ PL L++LV WLS+ EN    P   L    S  R            G 
Subjt:  SSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHR-----------AGG

Query:  TPWGVGFLLVLLLFMISYQSYFQERW
        +PWGV  L+VLLL ++ YQS F E W
Subjt:  TPWGVGFLLVLLLFMISYQSYFQERW

AT2G31940.1 unknown protein7.5e-3358.62Show/hide
Query:  NSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTE--NGRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLL
        +    P  PLHLC F LIL MF++ SWY++YE  +EG   Q KL L+ SPLLLLL VH+LS+ +   G +  LI L E++SL+RAGGTPWGV F+LV L 
Subjt:  NSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTE--NGRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLL

Query:  FMISYQSYFQERWFPL
        FM+SYQS FQERWFPL
Subjt:  FMISYQSYFQERWFPL

AT3G06890.1 unknown protein1.3e-0535.59Show/hide
Query:  LIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQ
        L++ P++LLL + +LS+     +  +    E +S+HR  G+P GV   LVL+LF++ Y+
Subjt:  LIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQ

AT5G19875.1 unknown protein7.7e-3059.22Show/hide
Query:  HLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER
        HLCF F+++F  LSF+WY N+ES +E   D LKL+ I +PL LLLLVH+ S    G L   +P PE+DS+HRAG +PWGV  +LVL+LFM+SYQS FQER
Subjt:  HLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER

Query:  WFP
        WFP
Subjt:  WFP

AT5G42146.1 unknown protein1.8e-0733.03Show/hide
Query:  PLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTEN--GRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSY
        PL L     I+ + L  S Y  Y+  VE     LKL ++  P+L + ++  LS       +    +   +  SL   G  PWGV  +L+LLL ++S QSY
Subjt:  PLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTEN--GRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSY

Query:  FQERWFPLL
        F   W+P L
Subjt:  FQERWFPLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCAACGGAGGCTCCTCCGCCGCAAATTCCCACTCTCAGCCCACTTTTCCCCTTCATCTCTGTTTCTTCTTCCTCATCCTCTTCATGTTCTTATCCTTCTCTTG
GTACTCCAACTACGAGTCCGCCGTCGAAGGCGTTTTCGATCAACTCAAGCTCCTCCTGATTGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAATACCG
AGAATGGCCGCCTGCCGCCCCTCATCCCCCTACCGGAAAAAGACTCGCTCCACCGCGCTGGAGGGACACCGTGGGGAGTCGGGTTTTTGTTAGTTCTTCTTCTTTTCATG
ATCTCTTATCAATCTTACTTTCAAGAACGATGGTTCCCTCTCTTGAGCCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCAACGGAGGCTCCTCCGCCGCAAATTCCCACTCTCAGCCCACTTTTCCCCTTCATCTCTGTTTCTTCTTCCTCATCCTCTTCATGTTCTTATCCTTCTCTTG
GTACTCCAACTACGAGTCCGCCGTCGAAGGCGTTTTCGATCAACTCAAGCTCCTCCTGATTGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAATACCG
AGAATGGCCGCCTGCCGCCCCTCATCCCCCTACCGGAAAAAGACTCGCTCCACCGCGCTGGAGGGACACCGTGGGGAGTCGGGTTTTTGTTAGTTCTTCTTCTTTTCATG
ATCTCTTATCAATCTTACTTTCAAGAACGATGGTTCCCTCTCTTGAGCCGGTGA
Protein sequenceShow/hide protein sequence
MAANGGSSAANSHSQPTFPLHLCFFFLILFMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNTENGRLPPLIPLPEKDSLHRAGGTPWGVGFLLVLLLFM
ISYQSYFQERWFPLLSR