; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G166360 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G166360
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCitrate synthase
Genome locationCicolChr09:3141651..3143576
RNA-Seq ExpressionCcUC09G166360
SyntenyCcUC09G166360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575660.1 hypothetical protein SDJN03_26299, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3143.78Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY
        MASIFAAPPS+LNLTSRPSLIH AVLPSSIAGIQ+HSNA P PSFR                                                      
Subjt:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY

Query:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED
                                                                            YRN++GLELRQRS SITASNSSD NS IKEE+
Subjt:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED

Query:  GSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK
        GSSKA++DAQGPPFLTILAGIFVFSL+LW+ SSA TS+IGLVVKLISTK
Subjt:  GSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK

XP_022953425.1 uncharacterized protein LOC111455984 [Cucurbita moschata]3.1e-3243.78Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY
        MASIF+APPS+LNLTSRPSLIH AVLPSSIAGIQ+HSNA P PSFR                                                      
Subjt:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY

Query:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED
                                                                            YRN++GLELRQRS SITASNSSDGNS IKEE+
Subjt:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED

Query:  GSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK
        GSSKA++DAQGPPFLTILAGIFVFSL+LW+ SSA TS+IGLVVKLISTK
Subjt:  GSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK

XP_023513741.1 uncharacterized protein LOC111778262 isoform X1 [Cucurbita pepo subsp. pepo]2.3e-3548.21Show/hide
Query:  MASIFAAPPSQLNLTS-RPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLR
        MAS+FAAPPSQL L+S RPSL H+A LP SI G++FH N  P PSFR                                   E LL+   SS      LR
Subjt:  MASIFAAPPSQLNLTS-RPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLR

Query:  YIEFQRISGVIIWCCTV-VSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKE
         I    I    IW  T+ +SML +KF+  LV   E T+ILV+ MEFG                       Y+N++ L+LRQRS SITASNSSDGNS  ++
Subjt:  YIEFQRISGVIIWCCTV-VSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKE

Query:  EDGSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK
        +DG SK T DAQGPPFLTILAG FVFSLVLWI SS+VT++I LVVKLISTK
Subjt:  EDGSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK

XP_023547947.1 uncharacterized protein LOC111806743 [Cucurbita pepo subsp. pepo]2.9e-3042.97Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY
        MASIFAAPPS+LNLTSRPSLIH AVLPSS AGIQ+HSNA P PSF                                                       
Subjt:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY

Query:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED
                                                                            YRN++GLELRQRS SITASNSSD NS IKEE+
Subjt:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED

Query:  GSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK
        GSSKA+ DAQGPPFLTILAGIFVFSL+LW+ SSA TS+IGLVVKLISTK
Subjt:  GSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK

XP_038899532.1 uncharacterized protein LOC120086813 isoform X1 [Benincasa hispida]4.0e-3244.58Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY
        MASIFAAP  +LNLTSRPSLIHRA LPSSI  IQFHSNASPFPSFR                                                      
Subjt:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY

Query:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED
                                                                            YRN+RGLELRQRS SITASNSSDGNS IKEE+
Subjt:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED

Query:  GSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK
        GSSKA+ DAQGPPFLTILAGIFVFSLVLWIFSS VTS + LVVKLISTK
Subjt:  GSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK

TrEMBL top hitse value%identityAlignment
A0A0A0K9W1 Uncharacterized protein8.7e-2540.8Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY
        MAS+FAAPPSQLNLTSR S IHRA LPS IA IQFHSNASPFPSFRY                                                     
Subjt:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY

Query:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED
                                                                             +N  GLELRQR  SI AS S+DGNS IKEE+
Subjt:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED

Query:  GSSKA-TNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK
         SSKA ++DAQGPPFLTILAG FV SL+LWIFSSAVTS++GLVVKLIS K
Subjt:  GSSKA-TNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK

A0A6J1GPL5 uncharacterized protein LOC1114559841.5e-3243.78Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY
        MASIF+APPS+LNLTSRPSLIH AVLPSSIAGIQ+HSNA P PSFR                                                      
Subjt:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY

Query:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED
                                                                            YRN++GLELRQRS SITASNSSDGNS IKEE+
Subjt:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED

Query:  GSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK
        GSSKA++DAQGPPFLTILAGIFVFSL+LW+ SSA TS+IGLVVKLISTK
Subjt:  GSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK

A0A6J1H506 uncharacterized protein LOC1114606322.6e-2137.2Show/hide
Query:  MASIFAAPPSQLNLTS-RPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLR
        MAS+FAAPPSQL L+S RPSL H+A LP SI G++FH N  P PSFR                                                     
Subjt:  MASIFAAPPSQLNLTS-RPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLR

Query:  YIEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEE
                                                                             Y+N++GL+LRQRS SITASNSSDGNS  KE+
Subjt:  YIEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEE

Query:  DGSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK
        +  SK T DAQGPPFLTILAG FVFSLVLWI SS+VT++I L VKLISTK
Subjt:  DGSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK

A0A6J1JUC2 uncharacterized protein LOC1114884362.4e-3042.74Show/hide
Query:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY
        MASIFAAPPS+LNLTSRPSLIH AVLPSSIAGIQ+HSNA P PSFR                                                      
Subjt:  MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRY

Query:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED
                                                                            YRN++GLEL  RS SITASNSSDGNS I+EE+
Subjt:  IEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEED

Query:  GSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLIST
        GSSKA++DAQGPPFLTILAGIFVFSL+LW+ SSA TS+IGLVVKLIST
Subjt:  GSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLIST

A0A6J1KVQ7 uncharacterized protein LOC1114980253.1e-2238Show/hide
Query:  MASIFAAPPSQLNLTS-RPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLR
        MAS+FAAPPSQL L+S RPSL H+A LP SI G++FH N  P PSFR                                                     
Subjt:  MASIFAAPPSQLNLTS-RPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLR

Query:  YIEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEE
                                                                             Y+N++GL+LRQRS SITASNSSDGNS  KEE
Subjt:  YIEFQRISGVIIWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEE

Query:  DGSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK
        +  SK T DAQGPPFLTILAG FVFSLVLWI SS+VT++I LVVKLISTK
Subjt:  DGSSKATNDAQGPPFLTILAGIFVFSLVLWIFSSAVTSVIGLVVKLISTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCTTCGCTGCGCCGCCGTCTCAACTGAATCTCACATCCCGCCCGAGTTTGATTCACAGAGCCGTTCTTCCCTCCTCCATCGCCGGCATTCAATTTCACTC
GAACGCCTCTCCATTTCCTTCTTTCAGGTATTTAATCACTCCTCTTCGATCCCTAACATTCAACTTATATGATCTCTTACAAGATATTGGGATTGTTATATCTTGTAATG
AGACTATTGAGCAACTTAGCATTGAAGTTCTTCTGTTACTTAGTTCTTCCTCTTCAGTTCATTGCATCTGGCTTCGTTACATAGAGTTTCAGAGGATATCTGGAGTTATT
ATATGGTGTTGCACGGTTGTGAGCATGTTAGCATTCAAGTTCGTCTATAACTTAGTTAAGCAAAAGGAATACACTATGATTCTTGTGCTGAGAATGGAATTTGGAGTGTC
CTTTGTTGATGGAACGAAAATGGTTAAAATCTTGAAACAATTATCCTACTGCCTTCTCAAGTTGTACAGGAACAGCAGAGGATTGGAATTAAGGCAAAGATCTCTTTCTA
TAACAGCCTCAAATTCCTCAGATGGGAATTCTATCATCAAGGAGGAAGATGGTTCGAGTAAAGCAACTAATGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGA
ATTTTTGTCTTTTCCCTTGTACTCTGGATATTCAGTTCTGCTGTCACGTCAGTTATAGGTCTAGTCGTCAAGCTGATCTCAACAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATCTTCGCTGCGCCGCCGTCTCAACTGAATCTCACATCCCGCCCGAGTTTGATTCACAGAGCCGTTCTTCCCTCCTCCATCGCCGGCATTCAATTTCACTC
GAACGCCTCTCCATTTCCTTCTTTCAGGTATTTAATCACTCCTCTTCGATCCCTAACATTCAACTTATATGATCTCTTACAAGATATTGGGATTGTTATATCTTGTAATG
AGACTATTGAGCAACTTAGCATTGAAGTTCTTCTGTTACTTAGTTCTTCCTCTTCAGTTCATTGCATCTGGCTTCGTTACATAGAGTTTCAGAGGATATCTGGAGTTATT
ATATGGTGTTGCACGGTTGTGAGCATGTTAGCATTCAAGTTCGTCTATAACTTAGTTAAGCAAAAGGAATACACTATGATTCTTGTGCTGAGAATGGAATTTGGAGTGTC
CTTTGTTGATGGAACGAAAATGGTTAAAATCTTGAAACAATTATCCTACTGCCTTCTCAAGTTGTACAGGAACAGCAGAGGATTGGAATTAAGGCAAAGATCTCTTTCTA
TAACAGCCTCAAATTCCTCAGATGGGAATTCTATCATCAAGGAGGAAGATGGTTCGAGTAAAGCAACTAATGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGA
ATTTTTGTCTTTTCCCTTGTACTCTGGATATTCAGTTCTGCTGTCACGTCAGTTATAGGTCTAGTCGTCAAGCTGATCTCAACAAAGTAG
Protein sequenceShow/hide protein sequence
MASIFAAPPSQLNLTSRPSLIHRAVLPSSIAGIQFHSNASPFPSFRYLITPLRSLTFNLYDLLQDIGIVISCNETIEQLSIEVLLLLSSSSSVHCIWLRYIEFQRISGVI
IWCCTVVSMLAFKFVYNLVKQKEYTMILVLRMEFGVSFVDGTKMVKILKQLSYCLLKLYRNSRGLELRQRSLSITASNSSDGNSIIKEEDGSSKATNDAQGPPFLTILAG
IFVFSLVLWIFSSAVTSVIGLVVKLISTK