; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G166540 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G166540
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description60S ribosomal protein L6
Genome locationCicolChr09:3356441..3358492
RNA-Seq ExpressionCcUC09G166540
SyntenyCcUC09G166540
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000915 - 60S ribosomal protein L6E
IPR005568 - Ribosomal protein L6, N-terminal
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041997 - Ribosomal Protein L6, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659463.1 60S ribosomal protein L6-1 [Cucumis sativus]1.4e-11696.1Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA APA+K PKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVN EKFDDKYFSKE QKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF
        IKSIE V ELKAYLGARFSLKAGMKPHELVF
Subjt:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF

XP_022954334.1 60S ribosomal protein L6-3-like [Cucurbita moschata]4.1e-11695.24Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK KADAPA+KSPKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPA++KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF
        IKSI+GV ELKAYL ARFSLKAGMKPHELVF
Subjt:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF

XP_022991926.1 60S ribosomal protein L6-1-like [Cucurbita maxima]1.3e-11796.1Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPA+KSPKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPA++KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF
        IKSIEGV ELKAYL ARFSLKAGMKPHELVF
Subjt:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF

XP_023548320.1 uncharacterized protein LOC111806995 isoform X2 [Cucurbita pepo subsp. pepo]5.4e-11695.24Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHD K KADAPA+KSPKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPA++KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF
        IKSIEGV ELKAYL ARFSLKAGMKPHELVF
Subjt:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF

XP_038896966.1 60S ribosomal protein L6-1-like [Benincasa hispida]3.2e-11695.24Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAP +K PKFYPADDVKKPLVNKRK KLTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS LPA+KKDDQ+AVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF
        IKSIE V ELKAYLGARFSLKAGMKPHELVF
Subjt:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF

TrEMBL top hitse value%identityAlignment
A0A0A0K9V0 60S ribosomal protein L66.9e-11796.1Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA APA+K PKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVN EKFDDKYFSKE QKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF
        IKSIE V ELKAYLGARFSLKAGMKPHELVF
Subjt:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF

A0A1S3CEA6 60S ribosomal protein L63.4e-11695.67Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA  PA+K PKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVN EKFDDKYFSKE QKKKKK EGEFFEAEKEEKSALPAEKKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF
        IKSIE V ELKAYLGARFSLKAGMKPHELVF
Subjt:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF

A0A6J1GSP4 60S ribosomal protein L6-3-like2.0e-11695.24Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK KADAPA+KSPKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPA++KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF
        IKSI+GV ELKAYL ARFSLKAGMKPHELVF
Subjt:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF

A0A6J1H5C5 60S ribosomal protein L62.4e-11493.51Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKADA  +K PKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKV+ISGVN EKFDDKYFSKEVQKKKKK EGEFFEAEKEEKSALPA+KKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF
        IKSIEGV ELKAYL ARFSLK+GMKPHEL F
Subjt:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF

A0A6J1JS55 60S ribosomal protein L6-1-like6.2e-11896.1Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPA+KSPKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPA++KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF
        IKSIEGV ELKAYL ARFSLKAGMKPHELVF
Subjt:  IKSIEGVTELKAYLGARFSLKAGMKPHELVF

SwissProt top hitse value%identityAlignment
P34091 60S ribosomal protein L61.3e-10182.74Show/hide
Query:  PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRV
        P V+RNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       +K PKFYPADDVKKPL+NKRK K TKLRASITPGTVLIILAGRFKGKRV
Subjt:  PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRV

Query:  VFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIE
        VFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVIATSTKVDISGVN+EKFDDKYF K+ +KK KKGEGEFFEAEK+E + LP EKKDDQKAVD  L+K+IE
Subjt:  VFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIE

Query:  GVTELKAYLGARFSLKAGMKPHELVF
        GV ELKAYLGARFSLKAGMKPHELVF
Subjt:  GVTELKAYLGARFSLKAGMKPHELVF

Q2YGT9 60S ribosomal protein L66.5e-4846.4Show/hide
Query:  PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAD-------------------KSPKFYPADDVKKPLVNKRKAKLT----K
        P  +RNP L+RG+G+YSRS MY ++ L+  K K      + + K K    A                    K P++YP +DV + L++  K   +    K
Subjt:  PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAD-------------------KSPKFYPADDVKKPLVNKRKAKLT----K

Query:  LRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNI-EKFDDKYFSKEVQKKKKKGEGEFFEAEKEE
        LRASITPGT+LIIL GR +GKRV+FLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTK+DISGV I E   D YF K+  +K +  EGE F+ EK E
Subjt:  LRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNI-EKFDDKYFSKEVQKKKKKGEGEFFEAEKEE

Query:  KSALPAEKKDDQKAVDTPLIKSIEGVTELKAYLGARFSLKAGMKPHELVF
        K  +  ++K DQKAVD+ +++ I+ V +L+ YL + F+L  G+ PH+LVF
Subjt:  KSALPAEKKDDQKAVDTPLIKSIEGVTELKAYLGARFSLKAGMKPHELVF

Q9C9C5 60S ribosomal protein L6-37.9e-10283.33Show/hide
Query:  KIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGK
        + P+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP +K PKFYPA+DVKKPL N+R AK TKLRASITPGTVLIILAGRFKGK
Subjt:  KIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKS
        RVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P  KKDDQKAVD  LIK+
Subjt:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKS

Query:  IEGVTELKAYLGARFSLKAGMKPHELVF
        IE V ELK YLGARFSLK GMKPHELVF
Subjt:  IEGVTELKAYLGARFSLKAGMKPHELVF

Q9C9C6 60S ribosomal protein L6-22.5e-10083.56Show/hide
Query:  RVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVV
        +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP +K PKFYPA+DVKKPL N+R AK  KLRASITPGTVLIILAGRFKGKRVV
Subjt:  RVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVV

Query:  FLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEG
        FLKQL SGLLLVTGPFKINGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P  KKDDQKAVD  LIK+IE 
Subjt:  FLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEG

Query:  VTELKAYLGARFSLKAGMKPHELVF
        V ELK YLGARFSLK GMKPHELVF
Subjt:  VTELKAYLGARFSLKAGMKPHELVF

Q9FZ76 60S ribosomal protein L6-12.1e-10282.61Show/hide
Query:  APKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFK
        A + P+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP +K  KFYPA+DVKKPLVN+RK K TKL+ASITPGTVLIILAGRFK
Subjt:  APKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLI
        GKRVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+YVI TSTK+DISGVN EKFDDKYF K  +KKKKK EGEFFEAEKEEK  +P EKK+DQK VD  LI
Subjt:  GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLI

Query:  KSIEGVTELKAYLGARFSLKAGMKPHELVF
        KSIE V ELK YLGARFSL  GMKPHELVF
Subjt:  KSIEGVTELKAYLGARFSLKAGMKPHELVF

Arabidopsis top hitse value%identityAlignment
AT1G18540.1 Ribosomal protein L6 family protein1.5e-10382.61Show/hide
Query:  APKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFK
        A + P+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP +K  KFYPA+DVKKPLVN+RK K TKL+ASITPGTVLIILAGRFK
Subjt:  APKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLI
        GKRVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+YVI TSTK+DISGVN EKFDDKYF K  +KKKKK EGEFFEAEKEEK  +P EKK+DQK VD  LI
Subjt:  GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLI

Query:  KSIEGVTELKAYLGARFSLKAGMKPHELVF
        KSIE V ELK YLGARFSL  GMKPHELVF
Subjt:  KSIEGVTELKAYLGARFSLKAGMKPHELVF

AT1G74050.1 Ribosomal protein L6 family protein5.6e-10383.33Show/hide
Query:  KIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGK
        + P+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP +K PKFYPA+DVKKPL N+R AK TKLRASITPGTVLIILAGRFKGK
Subjt:  KIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKS
        RVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P  KKDDQKAVD  LIK+
Subjt:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKS

Query:  IEGVTELKAYLGARFSLKAGMKPHELVF
        IE V ELK YLGARFSLK GMKPHELVF
Subjt:  IEGVTELKAYLGARFSLKAGMKPHELVF

AT1G74060.1 Ribosomal protein L6 family protein1.8e-10183.56Show/hide
Query:  RVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVV
        +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP +K PKFYPA+DVKKPL N+R AK  KLRASITPGTVLIILAGRFKGKRVV
Subjt:  RVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVV

Query:  FLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEG
        FLKQL SGLLLVTGPFKINGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P  KKDDQKAVD  LIK+IE 
Subjt:  FLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEG

Query:  VTELKAYLGARFSLKAGMKPHELVF
        V ELK YLGARFSLK GMKPHELVF
Subjt:  VTELKAYLGARFSLKAGMKPHELVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCCAAAATCCCCAGAGTTACAAGAAACCCGGATCTAATCCGAGGTGTCGGCAAGTACTCGAGGTCTAAGATGTATCATAAGCGGGGTCTTTGGGCCATCAAGGC
CAAAAATGGCGGAGTGTTCCCTCGTCACGATGCCAAGCCGAAAGCTGATGCCCCAGCCGATAAGTCGCCGAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTA
ACAAGCGCAAGGCCAAGCTCACTAAGCTCAGAGCTAGCATTACTCCTGGTACTGTGTTGATAATCCTCGCTGGGAGGTTCAAAGGGAAGAGAGTTGTGTTTTTGAAACAG
CTACCATCTGGGTTGCTTCTGGTCACTGGGCCATTCAAGATTAATGGTGTTCCTCTAAGACGAGTGAACCAATCGTATGTGATTGCAACCTCCACCAAAGTTGACATCTC
TGGTGTGAACATCGAAAAGTTCGACGACAAGTACTTTTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGGGTGAAGGAGAATTTTTTGAGGCAGAGAAAGAGGAGAAGAGTG
CTCTCCCGGCTGAGAAGAAGGATGACCAGAAAGCTGTGGATACACCATTGATAAAGTCGATTGAGGGGGTTACAGAGTTGAAGGCTTACTTGGGAGCAAGATTTTCTCTC
AAGGCTGGAATGAAACCTCATGAGCTTGTGTTTTAG
mRNA sequenceShow/hide mRNA sequence
GTGAATTAGGGTTTCTGGCAGTAGTCGTCTTTCTCGTTGCGAAGAAGAGCACCGCTGAGACAGCAGAGATACGCTAATGGCGCCCAAAATCCCCAGAGTTACAAGAAACC
CGGATCTAATCCGAGGTGTCGGCAAGTACTCGAGGTCTAAGATGTATCATAAGCGGGGTCTTTGGGCCATCAAGGCCAAAAATGGCGGAGTGTTCCCTCGTCACGATGCC
AAGCCGAAAGCTGATGCCCCAGCCGATAAGTCGCCGAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACTAAGCTCAGAGC
TAGCATTACTCCTGGTACTGTGTTGATAATCCTCGCTGGGAGGTTCAAAGGGAAGAGAGTTGTGTTTTTGAAACAGCTACCATCTGGGTTGCTTCTGGTCACTGGGCCAT
TCAAGATTAATGGTGTTCCTCTAAGACGAGTGAACCAATCGTATGTGATTGCAACCTCCACCAAAGTTGACATCTCTGGTGTGAACATCGAAAAGTTCGACGACAAGTAC
TTTTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGGGTGAAGGAGAATTTTTTGAGGCAGAGAAAGAGGAGAAGAGTGCTCTCCCGGCTGAGAAGAAGGATGACCAGAAAGC
TGTGGATACACCATTGATAAAGTCGATTGAGGGGGTTACAGAGTTGAAGGCTTACTTGGGAGCAAGATTTTCTCTCAAGGCTGGAATGAAACCTCATGAGCTTGTGTTTT
AGATAAGGGATTTGGTTGTTTCTTATTATTTTTTAAATTATCACCTTGTTTTCTATTCATCTGAACTTGGTATGACTTGTAATAGTTGCCTAATCCCAAATTTTGATTCT
AAATAGAGATTCCATGTTTTATAATTTCTCCTTTTTTAAGGAATTTATTTTTGAGTTTCTTGGTTCTGTAACACTCCAGTACAGAGTTTCACAG
Protein sequenceShow/hide protein sequence
MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQ
LPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEGVTELKAYLGARFSL
KAGMKPHELVF