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CcUC09G166800 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G166800
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionMATE1
Genome locationCicolChr09:3597430..3600127
RNA-Seq ExpressionCcUC09G166800
SyntenyCcUC09G166800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A9GP85 MATE12.8e-0766.04Show/hide
Query:  MDTPTAASSTGPIWPTKAVSIREAIGSAATARAAGTAMPSISRPIASNLKTHL
        MD PTAASSTGP+WP KAVS  EA GSA  A A GTA+P IS P++S+L T+L
Subjt:  MDTPTAASSTGPIWPTKAVSIREAIGSAATARAAGTAMPSISRPIASNLKTHL
J3LLF7 Uncharacterized protein7.4e-0861.4Show/hide
Query:  LTCPATAKPSDNKEDVIHTCKQVWNAAMGVGPSLAASDAARVTQKVTATTLASNRPP
        LTCPATA PS  ++    + +Q+W AAM VGP  AA+D A VTQKVTATTLAS+R P
Subjt:  LTCPATAKPSDNKEDVIHTCKQVWNAAMGVGPSLAASDAARVTQKVTATTLASNRPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTAATACGCAAAATCAGCAGCTCCAAAATTCACTCCGTCGAAAACAAACGCCAAGAAAGAGGCGAATCAGATGAGTTCATCAATGGCATTAGAAGGAAG
AAAACGAGTAGAGGTAGAATTAGGTTTTTGTTTCTCACCTGTCCAGCCACTGCTAAACCATCGGACAATAAAGAGGATGTCATCCACACTTGCAAGCAAGTTTGG
AACGCAGCCATGGGTGTTGGGCCCAGCCTTGCAGCTAGTGATGCTGCTAGAGTCACACAGAAGGTCACTGCTACAACTCTTGCCAGCAACAGACCCCCTGCTCCC
ACATTGCCAATGGTATCTTCCTCAGCGACAAAAGAAGTCGTAATGCTTACAAGTGGGAATATGGTAATCCTTGAAGCTTGGTTGAATATAGCAATGGATACTCCA
ACTGCAGCAAGTTCCACAGGTCCAATATGGCCAACAAAAGCAGTGTCTATAAGAGAAGCTATAGGATCAGCTGCAACAGCTAGAGCAGCAGGCACTGCAATGCCC
AGTATCTCCCGACCAATTGCATCGAACTTGAAAACACATCTACATGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTCTAATACGCAAAATCAGCAGCTCCAAAATTCACTCCGTCGAAAACAAACGCCAAGAAAGAGGCGAATCAGATGAGTTCATCAATGGCATTAGAAGGAAG
AAAACGAGTAGAGGTAGAATTAGGTTTTTGTTTCTCACCTGTCCAGCCACTGCTAAACCATCGGACAATAAAGAGGATGTCATCCACACTTGCAAGCAAGTTTGG
AACGCAGCCATGGGTGTTGGGCCCAGCCTTGCAGCTAGTGATGCTGCTAGAGTCACACAGAAGGTCACTGCTACAACTCTTGCCAGCAACAGACCCCCTGCTCCC
ACATTGCCAATGGTATCTTCCTCAGCGACAAAAGAAGTCGTAATGCTTACAAGTGGGAATATGGTAATCCTTGAAGCTTGGTTGAATATAGCAATGGATACTCCA
ACTGCAGCAAGTTCCACAGGTCCAATATGGCCAACAAAAGCAGTGTCTATAAGAGAAGCTATAGGATCAGCTGCAACAGCTAGAGCAGCAGGCACTGCAATGCCC
AGTATCTCCCGACCAATTGCATCGAACTTGAAAACACATCTACATGTATAAACATTTAAAACATTAGCAGACTTTGACACAAATTTCTTTGGCGGTTCAAAGATG
GGAAAAGGGGCTGTATTATAAGCTATGATTGGAAAAATCATATTGTGGTTCTCAACTTAAATTCAACACCAAGTATTTAAAGAAAAGAATTGATTGGAAGATGAA
ACACACCTTGCGTCTTTGAAGAAAACATTGACAGGCATCTTCAACTCGATTCCCCCTTCTGTGGTCAGACTAAG
Protein sequenceShow/hide protein sequence
MILIRKISSSKIHSVENKRQERGESDEFINGIRRKKTSRGRIRFLFLTCPATAKPSDNKEDVIHTCKQVWNAAMGVGPSLAASDAARVTQKVTATTLASNRPPAP
TLPMVSSSATKEVVMLTSGNMVILEAWLNIAMDTPTAASSTGPIWPTKAVSIREAIGSAATARAAGTAMPSISRPIASNLKTHLHV