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CcUC09G166880 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G166880
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr09:3678099..3678305
RNA-Seq ExpressionCcUC09G166880
SyntenyCcUC09G166880
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595145.1 hypothetical protein SDJN03_11698, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1071.83Show/hide
Query:  MAISGTSKISTVLVLAVVAIFSAVASAQEA----PAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFK
        MAISGTS +  V+V A+VA+FSAVASAQE+    PAPAP LDRGAA +LPAA  M LLFASFFLSLPAL K
Subjt:  MAISGTSKISTVLVLAVVAIFSAVASAQEA----PAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFK
KGN45142.1 hypothetical protein Csa_015584 [Cucumis sativus]1.8e-1177.05Show/hide
Query:  SKISTVLVLAVVAIFSAVASAQEAPAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFK
        SKIS V+ LA+VA+FSA+ SAQEAPAPAP LDRGAASSLP A  M LLFASFF SLPAL K
Subjt:  SKISTVLVLAVVAIFSAVASAQEAPAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFK
TrEMBL top hitse value%identityAlignment
A0A0A0K9T6 Uncharacterized protein8.8e-1277.05Show/hide
Query:  SKISTVLVLAVVAIFSAVASAQEAPAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFK
        SKIS V+ LA+VA+FSA+ SAQEAPAPAP LDRGAASSLP A  M LLFASFF SLPAL K
Subjt:  SKISTVLVLAVVAIFSAVASAQEAPAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTTCCGGCACTTCCAAGATCTCCACCGTGCTCGTTCTCGCCGTCGTGGCTATCTTCTCAGCCGTCGCTTCCGCTCAGGAAGCTCCAGCCCCGGCGCCGGAGCT
CGACCGAGGAGCAGCGTCGTCTCTGCCTGCTGCGGTGTTCATGCCTCTGCTCTTTGCTTCCTTCTTCCTCTCTCTTCCTGCACTTTTCAAGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTTCCGGCACTTCCAAGATCTCCACCGTGCTCGTTCTCGCCGTCGTGGCTATCTTCTCAGCCGTCGCTTCCGCTCAGGAAGCTCCAGCCCCGGCGCCGGAGCT
CGACCGAGGAGCAGCGTCGTCTCTGCCTGCTGCGGTGTTCATGCCTCTGCTCTTTGCTTCCTTCTTCCTCTCTCTTCCTGCACTTTTCAAGCCCTAA
Protein sequenceShow/hide protein sequence
MAISGTSKISTVLVLAVVAIFSAVASAQEAPAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFKP