; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G168040 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G168040
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionGATA transcription factor 15-like
Genome locationCicolChr09:4572671..4573816
RNA-Seq ExpressionCcUC09G168040
SyntenyCcUC09G168040
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046674.1 GATA transcription factor 15-like [Cucumis melo var. makuwa]2.7e-4467.25Show/hide
Query:  MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGV
        MLK EVIG    D  IMAFLMNRAAD   S STFNPSLM   S+Q L  +E +KQRACVHCR TRTPLWRAGPAGPRSLCNACGIRYRK K N+N+ G V
Subjt:  MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGV

Query:  ------NNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV
              NNKMGKGKK+ G GSLK+RVV LGREI              V E+IGEEEQ AAMLLMALSSGYV
Subjt:  ------NNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV

XP_008451515.1 PREDICTED: GATA transcription factor 15-like [Cucumis melo]4.7e-4465.71Show/hide
Query:  MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK---------
        MLK EVIG    D  IMAFLMNRAAD   S STFNPSLM   S+Q L  +E +KQRACVHCR TRTPLWRAGPAGPRSLCNACGIRYRK K         
Subjt:  MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK---------

Query:  -NNNNSIGGVNNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV
         NNNN+    NNKMGKGKK+ G GSLK+RVV LGREI              V E+IGEEEQ AAMLLMALSSGYV
Subjt:  -NNNNSIGGVNNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV

XP_011659382.1 GATA transcription factor 15 [Cucumis sativus]4.8e-4970.76Show/hide
Query:  MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFN-PSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGG
        MLK EVIGDFGLD  ++AFLMNRAADLSA  STFN PSLM   SK+ LL +E +KQRACVHCR TRTPLWRAGPAGPRSLCNACGIRYRK K N+N+ GG
Subjt:  MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFN-PSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGG

Query:  V----NNKMGKGKKVG--EGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV
        V    NNKMGKGKK+G   GSLKVRVV LGREI              V E+IGEEEQ AA+LLMALSSGYV
Subjt:  V----NNKMGKGKKVG--EGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV

XP_023004687.1 GATA transcription factor 15-like [Cucurbita maxima]3.0e-3566.67Show/hide
Query:  MAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGVNNKMGKGKKVGEGSLK
        MAF +N   DLS   STFNPS +   S Q LL  EPQKQR C HCRTTRTPLWRAGPAGPRSLCNACGIRYRK KNNN   GGV NK G GKKV      
Subjt:  MAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGVNNKMGKGKKVGEGSLK

Query:  VRVVSLGREIV-------------EEAIGEEEQAAAMLLMALSSGYV
        VRVV LGREI+              E IGEEEQAAAMLLMALSSGYV
Subjt:  VRVVSLGREIV-------------EEAIGEEEQAAAMLLMALSSGYV

XP_038899958.1 GATA transcription factor 15-like [Benincasa hispida]2.6e-4779.85Show/hide
Query:  MAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGVNNKMGKGKKVGEGSLK
        MAFL+NR AD SA  STF PSLM   SKQSLLN EPQKQRACVHC TTRTPLWRAGPAGPRSLCNACGIRYRK KNNN++    NNK+GKGKKVG GSLK
Subjt:  MAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGVNNKMGKGKKVGEGSLK

Query:  VRVVSLGREIVEEAIGEEEQAAAMLLMALSSGYV
        +RVV L R+IV E IGEEEQAAAMLLMALSS YV
Subjt:  VRVVSLGREIVEEAIGEEEQAAAMLLMALSSGYV

TrEMBL top hitse value%identityAlignment
A0A0A0K6B1 GATA-type domain-containing protein2.3e-4970.76Show/hide
Query:  MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFN-PSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGG
        MLK EVIGDFGLD  ++AFLMNRAADLSA  STFN PSLM   SK+ LL +E +KQRACVHCR TRTPLWRAGPAGPRSLCNACGIRYRK K N+N+ GG
Subjt:  MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFN-PSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGG

Query:  V----NNKMGKGKKVG--EGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV
        V    NNKMGKGKK+G   GSLKVRVV LGREI              V E+IGEEEQ AA+LLMALSSGYV
Subjt:  V----NNKMGKGKKVG--EGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV

A0A1S3BSR7 GATA transcription factor 15-like2.3e-4465.71Show/hide
Query:  MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK---------
        MLK EVIG    D  IMAFLMNRAAD   S STFNPSLM   S+Q L  +E +KQRACVHCR TRTPLWRAGPAGPRSLCNACGIRYRK K         
Subjt:  MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK---------

Query:  -NNNNSIGGVNNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV
         NNNN+    NNKMGKGKK+ G GSLK+RVV LGREI              V E+IGEEEQ AAMLLMALSSGYV
Subjt:  -NNNNSIGGVNNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV

A0A5A7TUD0 GATA transcription factor 15-like1.3e-4467.25Show/hide
Query:  MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGV
        MLK EVIG    D  IMAFLMNRAAD   S STFNPSLM   S+Q L  +E +KQRACVHCR TRTPLWRAGPAGPRSLCNACGIRYRK K N+N+ G V
Subjt:  MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGV

Query:  ------NNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV
              NNKMGKGKK+ G GSLK+RVV LGREI              V E+IGEEEQ AAMLLMALSSGYV
Subjt:  ------NNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV

A0A6J1H9M3 GATA transcription factor 15-like3.6e-3465.31Show/hide
Query:  MAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGVNNKMGKGKKVGEGSLK
        MAF +N   DLS   STFNPS +   S Q LL +EPQKQR C HCRTTRTPLWRAGPAGPRSLCNACGIRYRK KN+N   GGV NK   GKKV      
Subjt:  MAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGVNNKMGKGKKVGEGSLK

Query:  VRVVSLGREIV-------------EEAIGEEEQAAAMLLMALSSGYV
        VRVV LGREI+              E IGEEEQAAAMLLMALSSGYV
Subjt:  VRVVSLGREIV-------------EEAIGEEEQAAAMLLMALSSGYV

A0A6J1KR45 GATA transcription factor 15-like1.5e-3566.67Show/hide
Query:  MAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGVNNKMGKGKKVGEGSLK
        MAF +N   DLS   STFNPS +   S Q LL  EPQKQR C HCRTTRTPLWRAGPAGPRSLCNACGIRYRK KNNN   GGV NK G GKKV      
Subjt:  MAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGVNNKMGKGKKVGEGSLK

Query:  VRVVSLGREIV-------------EEAIGEEEQAAAMLLMALSSGYV
        VRVV LGREI+              E IGEEEQAAAMLLMALSSGYV
Subjt:  VRVVSLGREIV-------------EEAIGEEEQAAAMLLMALSSGYV

SwissProt top hitse value%identityAlignment
Q5HZ36 GATA transcription factor 211.7e-0969.44Show/hide
Query:  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK
        R C  C TT+TPLWR+GP GP+SLCNACGIR RK +
Subjt:  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK

Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 11.3e-0969.44Show/hide
Query:  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK
        R C  C TT+TPLWR+GP GP+SLCNACGIR RK +
Subjt:  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK

Q8LG10 GATA transcription factor 156.8e-1446.23Show/hide
Query:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKN---NNNSIGGVNNKMGKGKKVGEGSLKVRVVSLGREIV----------EEAIGEEEQAAAM
        ++++C  C T++TPLWR GPAGP+SLCNACGIR RK +    +N S         +  K G+ SLK R++ LGRE++             +GEEEQ AA+
Subjt:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKN---NNNSIGGVNNKMGKGKKVGEGSLKVRVVSLGREIV----------EEAIGEEEQAAAM

Query:  LLMALS
        LLMALS
Subjt:  LLMALS

Q9FJ10 GATA transcription factor 163.1e-1449.11Show/hide
Query:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRK-----TKNN----NNSIGGVNNKMGKGKKVGEGSLKVRVVSLG---REIVE---EAIGEEEQAA
        K++ C  C T++TPLWR GP GP+SLCNACGIR RK     T++N     +S GG N K G+       SLK  ++ LG   R  VE   + +GEEEQ A
Subjt:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRK-----TKNN----NNSIGGVNNKMGKGKKVGEGSLKVRVVSLG---REIVE---EAIGEEEQAA

Query:  AMLLMALSSGYV
        A+LLMALS G V
Subjt:  AMLLMALSSGYV

Q9LIB5 GATA transcription factor 171.3e-0970.27Show/hide
Query:  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK
        +R CV C T RTPLWR GPAGP+SLCNACGI+ RK +
Subjt:  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 154.9e-1546.23Show/hide
Query:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKN---NNNSIGGVNNKMGKGKKVGEGSLKVRVVSLGREIV----------EEAIGEEEQAAAM
        ++++C  C T++TPLWR GPAGP+SLCNACGIR RK +    +N S         +  K G+ SLK R++ LGRE++             +GEEEQ AA+
Subjt:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKN---NNNSIGGVNNKMGKGKKVGEGSLKVRVVSLGREIV----------EEAIGEEEQAAAM

Query:  LLMALS
        LLMALS
Subjt:  LLMALS

AT3G16870.1 GATA transcription factor 179.5e-1170.27Show/hide
Query:  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK
        +R CV C T RTPLWR GPAGP+SLCNACGI+ RK +
Subjt:  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK

AT4G16141.1 GATA type zinc finger transcription factor family protein5.6e-1141.67Show/hide
Query:  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK-----------------NNNNSIGGVNNKMGKGKKVGEGSLKVRVVSLGREIVEEAIGE
        ++ CV C T+RTPLWR GPAGP+SLCNACGI+ RK +                 NNN  +   N K GKG+ V      V++      IV+ A GE
Subjt:  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK-----------------NNNNSIGGVNNKMGKGKKVGEGSLKVRVVSLGREIVEEAIGE

AT5G49300.1 GATA transcription factor 162.2e-1549.11Show/hide
Query:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRK-----TKNN----NNSIGGVNNKMGKGKKVGEGSLKVRVVSLG---REIVE---EAIGEEEQAA
        K++ C  C T++TPLWR GP GP+SLCNACGIR RK     T++N     +S GG N K G+       SLK  ++ LG   R  VE   + +GEEEQ A
Subjt:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRK-----TKNN----NNSIGGVNNKMGKGKKVGEGSLKVRVVSLG---REIVE---EAIGEEEQAA

Query:  AMLLMALSSGYV
        A+LLMALS G V
Subjt:  AMLLMALSSGYV

AT5G56860.1 GATA type zinc finger transcription factor family protein1.2e-1069.44Show/hide
Query:  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK
        R C  C TT+TPLWR+GP GP+SLCNACGIR RK +
Subjt:  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAAAGCTGAAGTAATTGGTGATTTTGGTTTGGATCCTTCCATCATGGCCTTCCTCATGAACCGCGCCGCCGATCTCTCTGCTTCCACTTCCACTTTCAAC
CCATCTCTAATGCCCGACGCTTCGAAACAGAGTCTGCTCAATATGGAGCCGCAGAAACAGAGGGCCTGCGTCCACTGTCGCACCACCAGAACCCCTCTCTGGAGA
GCCGGTCCGGCTGGGCCAAGGTCGCTGTGCAATGCATGTGGGATTCGATACAGGAAGACGAAGAATAATAATAATAGTATTGGAGGAGTGAATAATAAGATGGGA
AAAGGGAAGAAAGTGGGAGAAGGATCATTGAAGGTGAGAGTGGTGAGCTTAGGAAGAGAAATAGTTGAAGAGGCAATCGGAGAAGAAGAACAGGCGGCGGCGATG
CTTCTTATGGCTCTATCTTCCGGCTATGTGTGA
mRNA sequenceShow/hide mRNA sequence
CCAAAATTCAAAACACCTTCCTTCAAACACCTTCCTTTCTAGTTTGTGATGCTCAAAGCTGAAGTAATTGGTGATTTTGGTTTGGATCCTTCCATCATGGCCTTC
CTCATGAACCGCGCCGCCGATCTCTCTGCTTCCACTTCCACTTTCAACCCATCTCTAATGCCCGACGCTTCGAAACAGAGTCTGCTCAATATGGAGCCGCAGAAA
CAGAGGGCCTGCGTCCACTGTCGCACCACCAGAACCCCTCTCTGGAGAGCCGGTCCGGCTGGGCCAAGGTCGCTGTGCAATGCATGTGGGATTCGATACAGGAAG
ACGAAGAATAATAATAATAGTATTGGAGGAGTGAATAATAAGATGGGAAAAGGGAAGAAAGTGGGAGAAGGATCATTGAAGGTGAGAGTGGTGAGCTTAGGAAGA
GAAATAGTTGAAGAGGCAATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTTATGGCTCTATCTTCCGGCTATGTGTGATGTCATTCATATAAACACTGGATT
CTAGCTACCACTTTTGGGAATTTACACTTTTTTATTTGTCTCTCTTCATTTTGTAATGGAAAGAGAGATTTCGAGTTGGAC
Protein sequenceShow/hide protein sequence
MLKAEVIGDFGLDPSIMAFLMNRAADLSASTSTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNSIGGVNNKMG
KGKKVGEGSLKVRVVSLGREIVEEAIGEEEQAAAMLLMALSSGYV