CuGenDBv2

Gene ID	CcUC09G168540
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	outer envelope pore protein 16-4, chloroplastic
Genome location	CicolChr09:4886427..4889359
RNA-Seq Expression	CcUC09G168540
Synteny	CcUC09G168540
Gene Ontology terms	GO:0045039 - protein insertion into mitochondrial inner membrane (biological process) GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component)
InterPro domains	IPR039175 - Mitochondrial import inner membrane translocase subunit TIM22

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004136026.1 outer envelope pore protein 16-4, chloroplastic [Cucumis sativus]

5.7e-31

50.79

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGL+GV HAAFV      +  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        G                     C +   R  + W           LNGLIAGAVAGAAIAT+TRSWSQVVGMAALVSAFSAAAEYS+SL
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

XP_008451566.1 PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis melo]

2.0e-31

51.32

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGLSGV HAAFV      +  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        G                     C +   R  + W           LNGLIAGAVAGAAIAT+TRSWSQVVGMAALVSAFSAAAEYS+SL
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

XP_022143748.1 outer envelope pore protein 16-4, chloroplastic isoform X2 [Momordica charantia]

3.0e-32

52.38

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGL GVGHAAFV      +  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        G                     C +   R  + W           LNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

XP_022960078.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata]

8.8e-32

52.38

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGV HAAFV      +  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        G                     C +   R  + W           LNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

XP_038896772.1 outer envelope pore protein 16-4, chloroplastic [Benincasa hispida]

5.2e-32

51.85

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        ME+ELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFV      +  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        G                     C +   R  + W           LNGLIAGAVAGA IATRTRSWSQVVGM ALVSAFSAAAEYS+SL
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BSK4 outer envelope pore protein 16-4, chloroplastic

9.5e-32

51.32

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGLSGV HAAFV      +  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        G                     C +   R  + W           LNGLIAGAVAGAAIAT+TRSWSQVVGMAALVSAFSAAAEYS+SL
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

A0A5A7VIR9 Outer envelope pore protein 16-4

9.5e-32

51.32

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGLSGV HAAFV      +  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        G                     C +   R  + W           LNGLIAGAVAGAAIAT+TRSWSQVVGMAALVSAFSAAAEYS+SL
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

A0A6J1CRH2 outer envelope pore protein 16-4, chloroplastic isoform X2

1.5e-32

52.38

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGL GVGHAAFV      +  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        G                     C +   R  + W           LNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

A0A6J1H7T5 outer envelope pore protein 16-4, chloroplastic

4.3e-32

52.38

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGV HAAFV      +  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        G                     C +   R  + W           LNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

A0A6J1KSU1 outer envelope pore protein 16-4, chloroplastic

4.3e-32

52.38

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Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGV HAAFV      +  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL
        G                     C +   R  + W           LNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFSAAAEYS+SL
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

SwissProt top hits

e value

%identity

Alignment

Q9LZH8 Outer envelope pore protein 16-4, chloroplastic

6.4e-17

37.23

Show/hide

Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK GLSGV  A+FV      F  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKS
        G            V   T    C L   R  + W           +N L+ GAVAGAA+A  TR+W+QVVGMA LVSAFS  A  +++
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKS

Arabidopsis top hits

e value

%identity

Alignment

AT3G62880.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein

4.5e-18

37.23

Show/hide

Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK GLSGV  A+FV      F  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKS
        G            V   T    C L   R  + W           +N L+ GAVAGAA+A  TR+W+QVVGMA LVSAFS  A  +++
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKS

AT3G62880.2 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein

4.5e-18

37.23

Show/hide

Query:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG
        ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK GLSGV  A+FV      F  +                                 C +V 
Subjt:  MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVG

Query:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKS
        G            V   T    C L   R  + W           +N L+ GAVAGAA+A  TR+W+QVVGMA LVSAFS  A  +++
Subjt:  GCVLRFSKLFIRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKS

Sequences

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CDS sequence

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ATGGAAGACGAACTCAACGGCGTCGTTCCATGTTCATCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACGGCCGGCGCTCTATGGGGCTTGTGTATGGGTCCGTACAA
CTCTCGTAAAAATGGCCTCAGTGGCGTCGGCCATGCTGCTTTCGTGGTACCGTATACTTGCTATTTTTTGATTGAGATTGTAGCATTTTGGCGTTTGTTCGATCTGAAAT
TGCGTCTTTGTGATCTATTTTGCAGGCAAAGTCTGTTGGAAAATACGGCTTTCAATGTGGTTTTATGTCTTGTTGTGGGGGGTTGCGTCCTTAGATTTTCGAAATTATTC
ATTAGGCCTGTACTTTTTTGGACTGGAGCCTTTTCTTGTAGGTTAGTTTCTGGTCGGTATCCCTCTTTTTGGCAGCTGTTTTTTTCGATTTTCTTGAAAGTTTTGTTGAA
TGGTTTGATCGCGGGTGCAGTTGCAGGAGCAGCGATTGCTACGAGGACCAGAAGTTGGTCGCAAGTAGTTGGGATGGCTGCCCTTGTCTCTGCCTTCAGTGCTGCTGCTG
AATATTCAAAATCACTTTAG

mRNA sequence

Show/hide mRNA sequence

AACAAAAGATCAAAACGACGTAGTATTGCTTGAACTTGGGAGATAGCTTTCTGCGTATGAGTTCCAAAGGAAATTGAAAATTGAAAGATGGAAGACGAACTCAACGGCGT
CGTTCCATGTTCATCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACGGCCGGCGCTCTATGGGGCTTGTGTATGGGTCCGTACAACTCTCGTAAAAATGGCCTCAGTG
GCGTCGGCCATGCTGCTTTCGTGGTACCGTATACTTGCTATTTTTTGATTGAGATTGTAGCATTTTGGCGTTTGTTCGATCTGAAATTGCGTCTTTGTGATCTATTTTGC
AGGCAAAGTCTGTTGGAAAATACGGCTTTCAATGTGGTTTTATGTCTTGTTGTGGGGGGTTGCGTCCTTAGATTTTCGAAATTATTCATTAGGCCTGTACTTTTTTGGAC
TGGAGCCTTTTCTTGTAGGTTAGTTTCTGGTCGGTATCCCTCTTTTTGGCAGCTGTTTTTTTCGATTTTCTTGAAAGTTTTGTTGAATGGTTTGATCGCGGGTGCAGTTG
CAGGAGCAGCGATTGCTACGAGGACCAGAAGTTGGTCGCAAGTAGTTGGGATGGCTGCCCTTGTCTCTGCCTTCAGTGCTGCTGCTGAATATTCAAAATCACTTTAGAAT
ACCACTTCTAGGAACGAAACCGTGAGGATAAACCCAGCAAGTGTCCTCTCATTATTCCACTAAATTGTTTGCTCTGTCCACAAAGGTTTGTTCGTATCTGTCGAGGGAGG
GACTGCAATCTCGTCATGTCGATTTGATTCAATCTTCACGACTGCAGCTAACTTCTGGTGAGTTAAAGCCAGAAATGATGGAAAACTAACTCCTTATACCTTGATGTATA
ACAGCTCTCAGTGACTGCTATTCAGAAGATGAAACATCATATGCAAAGTGGCCGATGTTCCCTTTCTTTCTTTAGTTTTACTACCTACTGAAACTTCCATCATTCTGTCT
CAATTAACTCCTCTTTCTGAGAATCAGTCCTAGAATTTCAGTAAGCTTTGAGTTTGATTGTGTTTTTTCTGAAGTAAATACGTAAGTTTTCATTGATTTGAATCATTGGA
TGAAAAGTTGCCGGATGGAAAATACCTATCAAGTTTTTTGTCTGAAGTACTCT

Protein sequence

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MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFNVVLCLVVGGCVLRFSKLF
IRPVLFWTGAFSCRLVSGRYPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

CcUC09G168540 (gene) of Watermelon (PI 537277) v1 genome