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CcUC09G168560 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G168560
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr09:4891692..4892309
RNA-Seq ExpressionCcUC09G168560
SyntenyCcUC09G168560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7804862.1 UDP-glucuronic acid decarboxylase 2 [Senna tora]1.5e-0658.18Show/hide
Query:  ALFLPFNRLFFFNLPKNRATVLASVIVTDTPARAHFVGLRLAVLENGDSDWMQRS
        ALFLP    + F+  +  +  L SVIVTDTPA AH +GL LAV ENG SDWM RS
Subjt:  ALFLPFNRLFFFNLPKNRATVLASVIVTDTPARAHFVGLRLAVLENGDSDWMQRS
KAG7030219.1 Serine/arginine-rich-splicing factor SR34, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-1958.18Show/hide
Query:  MAASKTSTQSETAALFLPFNRLFFFNLPKNRATVLASVIVTDTPARAHFVGLRLAVLENGDSDWMQRSWCRLVLAEWVSHGRMAMRAKMVAIDALVLDPR
        MA+SKTSTQSETAALFLPF RL FF+L KN AT LASVIVTDT A AHF                      LV AE VSHGR+ M+AK V I+ L +  R
Subjt:  MAASKTSTQSETAALFLPFNRLFFFNLPKNRATVLASVIVTDTPARAHFVGLRLAVLENGDSDWMQRSWCRLVLAEWVSHGRMAMRAKMVAIDALVLDPR

Query:  NMFDEMPETS
        NMFDEM E S
Subjt:  NMFDEMPETS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTTCAAAGACCTCAACACAGTCCGAAACTGCAGCCCTGTTTCTCCCCTTCAACCGCTTGTTTTTCTTCAACCTCCCCAAGAATCGTGCCACGGTTTTGGCCTC
TGTTATCGTCACCGACACCCCCGCTCGCGCCCATTTTGTGGGGCTTCGCTTGGCAGTGCTTGAAAATGGTGACAGCGATTGGATGCAGAGATCTTGGTGTCGTCTCGTCT
TAGCGGAGTGGGTCAGCCATGGGAGAATGGCGATGAGGGCAAAAATGGTTGCGATTGATGCTCTTGTACTGGATCCACGCAACATGTTCGATGAAATGCCTGAAACAAGT
GAAAAAAGGTATTTGCTATACATTAGGCGTGGGGATGGTGATTGCATTGAAGAAGGGGAGGAGAAG
mRNA sequenceShow/hide mRNA sequence
AACCCCAAGCGACCGATGGAGCTCATCAATGGCGGCTTCAAAGACCTCAACACAGTCCGAAACTGCAGCCCTGTTTCTCCCCTTCAACCGCTTGTTTTTCTTCAACCTCC
CCAAGAATCGTGCCACGGTTTTGGCCTCTGTTATCGTCACCGACACCCCCGCTCGCGCCCATTTTGTGGGGCTTCGCTTGGCAGTGCTTGAAAATGGTGACAGCGATTGG
ATGCAGAGATCTTGGTGTCGTCTCGTCTTAGCGGAGTGGGTCAGCCATGGGAGAATGGCGATGAGGGCAAAAATGGTTGCGATTGATGCTCTTGTACTGGATCCACGCAA
CATGTTCGATGAAATGCCTGAAACAAGTGAAAAAAGGTATTTGCTATACATTAGGCGTGGGGATGGTGATTGCATTGAAGAAGGGGAGGAGAAG
Protein sequenceShow/hide protein sequence
MAASKTSTQSETAALFLPFNRLFFFNLPKNRATVLASVIVTDTPARAHFVGLRLAVLENGDSDWMQRSWCRLVLAEWVSHGRMAMRAKMVAIDALVLDPRNMFDEMPETS
EKRYLLYIRRGDGDCIEEGEEK