; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G170430 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G170430
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionEthylene-responsive transcription factor
Genome locationCicolChr09:6717733..6718569
RNA-Seq ExpressionCcUC09G170430
SyntenyCcUC09G170430
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PHT39007.1 Ethylene-responsive transcription factor [Capsicum baccatum]2.4e-3260.45Show/hide
Query:  MEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSS-FESQSS
        M+       + NGGGG GGGD  +KYRGVRRRPWGKFAAEIRDS+R+G R+WLGTF TAEEAARAYDRAA+ MRG LA LNFPEEY L + SS F + ++
Subjt:  MEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSS-FESQSS

Query:  SLQNDETERKEEAVFEFECLDEKLLDELLDFDKE
        +     +      V EFE LD+KLL+ELLD D++
Subjt:  SLQNDETERKEEAVFEFECLDEKLLDELLDFDKE

PHU21716.1 Ethylene-responsive transcription factor [Capsicum chinense]4.8e-3361.19Show/hide
Query:  MEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSS-FESQSS
        ME       + NGGGG GGGD  +KYRGVRRRPWGKFAAEIRDS+R+G R+WLGTF TAEEAARAYDRAA+ MRG LA LNFPEEY L + SS F + ++
Subjt:  MEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSS-FESQSS

Query:  SLQNDETERKEEAVFEFECLDEKLLDELLDFDKE
        +  +  +      V EFE LD+KLL+ELLD D++
Subjt:  SLQNDETERKEEAVFEFECLDEKLLDELLDFDKE

PON62613.1 AP2/ERF transcription factor [Parasponia andersonii]3.1e-3257.05Show/hide
Query:  ESKMKKGTNTEMEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM
        +  + +GTN + E+                G + V+YRGVRRRPWGKFAAEIRDS+R G R+WLGTF TAEEAARAYDRAAF MRG  A LNFP EYPL 
Subjt:  ESKMKKGTNTEMEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM

Query:  N-----VSSFESQSSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKE
               SS  S SS+ +N ET+++ E VFEFE LD+KLLDELLDF+K+
Subjt:  N-----VSSFESQSSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKE

XP_030498307.1 ethylene-responsive transcription factor ERF098-like [Cannabis sativa]4.8e-3366.13Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSFESQSSSLQNDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS+R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP ++V           SS  S SS+++N ET+++
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSFESQSSSLQNDETERK

Query:  EEAVFEFECLDEKLLDELLDFDKE
        E  VFEFE LD+KLLDELLDFD +
Subjt:  EEAVFEFECLDEKLLDELLDFDKE

XP_038896382.1 ethylene-responsive transcription factor 14-like [Benincasa hispida]2.2e-5789.71Show/hide
Query:  MEDRRQRALEIN---GGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQ
        MED RQR  EIN   GGGGGGGG+RCVKYRGVRRRPWGKFAAEIRDS+RRG RIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM VSSFESQ
Subjt:  MEDRRQRALEIN---GGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQ

Query:  SSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKE
        SSSLQNDETERKEE V EFECLDE LLDELLDF KE
Subjt:  SSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKE

TrEMBL top hitse value%identityAlignment
A0A2G2W192 Ethylene-responsive transcription factor1.2e-3260.45Show/hide
Query:  MEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSS-FESQSS
        M+       + NGGGG GGGD  +KYRGVRRRPWGKFAAEIRDS+R+G R+WLGTF TAEEAARAYDRAA+ MRG LA LNFPEEY L + SS F + ++
Subjt:  MEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSS-FESQSS

Query:  SLQNDETERKEEAVFEFECLDEKLLDELLDFDKE
        +     +      V EFE LD+KLL+ELLD D++
Subjt:  SLQNDETERKEEAVFEFECLDEKLLDELLDFDKE

A0A2G3CSK0 Ethylene-responsive transcription factor2.3e-3361.19Show/hide
Query:  MEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSS-FESQSS
        ME       + NGGGG GGGD  +KYRGVRRRPWGKFAAEIRDS+R+G R+WLGTF TAEEAARAYDRAA+ MRG LA LNFPEEY L + SS F + ++
Subjt:  MEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSS-FESQSS

Query:  SLQNDETERKEEAVFEFECLDEKLLDELLDFDKE
        +  +  +      V EFE LD+KLL+ELLD D++
Subjt:  SLQNDETERKEEAVFEFECLDEKLLDELLDFDKE

A0A2P5CNI8 AP2/ERF transcription factor1.5e-3257.05Show/hide
Query:  ESKMKKGTNTEMEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM
        +  + +GTN + E+                G + V+YRGVRRRPWGKFAAEIRDS+R G R+WLGTF TAEEAARAYDRAAF MRG  A LNFP EYPL 
Subjt:  ESKMKKGTNTEMEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM

Query:  N-----VSSFESQSSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKE
               SS  S SS+ +N ET+++ E VFEFE LD+KLLDELLDF+K+
Subjt:  N-----VSSFESQSSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKE

A0A7J6GXW5 AP2/ERF domain-containing protein2.3e-3366.13Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSFESQSSSLQNDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS+R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP ++V           SS  S SS+++N ET+++
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSFESQSSSLQNDETERK

Query:  EEAVFEFECLDEKLLDELLDFDKE
        E  VFEFE LD+KLLDELLDFD +
Subjt:  EEAVFEFECLDEKLLDELLDFDKE

A0A803PGP0 Uncharacterized protein2.3e-3366.13Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSFESQSSSLQNDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS+R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP ++V           SS  S SS+++N ET+++
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSFESQSSSLQNDETERK

Query:  EEAVFEFECLDEKLLDELLDFDKE
        E  VFEFE LD+KLLDELLDFD +
Subjt:  EEAVFEFECLDEKLLDELLDFDKE

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI58.1e-2359.62Show/hide
Query:  KYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS----SFESQSSSLQNDETERKEEA------VF
        KYRGVRRRPWGK+AAEIRDS+R G R+WLGTFETAEEAA AYDRAAFRMRG  A LNFP E    +VS    S  S S +  N+      E       VF
Subjt:  KYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS----SFESQSSSLQNDETERKEEA------VF

Query:  EFEC
        E  C
Subjt:  EFEC

P93822 Ethylene-responsive transcription factor 141.5e-2959.48Show/hide
Query:  GGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLQNDETERKEEAVF
        G GGGG    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAE+AARAYDRAA+ MRG+ A LNFP EY +   SS  + +SS  + +       VF
Subjt:  GGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLQNDETERKEEAVF

Query:  EFECLDEKLLDELLDF
        EFE LD+ +LDELL++
Subjt:  EFECLDEKLLDELLDF

Q9LSX0 Ethylene-responsive transcription factor ERF0963.2e-2758.12Show/hide
Query:  GGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN--VSSFESQSSSLQNDETERKEEA
        GG G G    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAEEAARAYD+AA+ MRGQ A LNFP EY + +   SS     SS  +         
Subjt:  GGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN--VSSFESQSSSLQNDETERKEEA

Query:  VFEFECLDEKLLDELLD
        VFEFE LD+ +L+ELL+
Subjt:  VFEFECLDEKLLDELLD

Q9LTC5 Ethylene-responsive transcription factor ERF0981.8e-3056.8Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNVSSFESQSSSLQNDETERKE
        D+  ++RGVRRRPWGKFAAEIRD SR G R+WLGTFETAEEAARAYDRAAF +RG LA LNFP EY          P    SS  S S S   + + + +
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNVSSFESQSSSLQNDETERKE

Query:  EAVFEFECLDEKLLDELLDFDKETK
          VFEFE LD+K+L+ELLD ++  +
Subjt:  EAVFEFECLDEKLLDELLDFDKETK

Q9LTC6 Ethylene-responsive transcription factor ERF0951.1e-2755.93Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NVSSFESQSSSLQNDETERKEEAVFEF
        +KYRGVR+RPWGK+AAEIRDS+R G R+WLGTF TAE+AARAYDRAAF MRGQ A LNFP EY +M       + ++  S SS  +          V EF
Subjt:  VKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NVSSFESQSSSLQNDETERKEEAVFEF

Query:  ECLDEKLLDELLDFDKET
        E LD+ LL+ELLD+ + +
Subjt:  ECLDEKLLDELLDFDKET

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 141.1e-3059.48Show/hide
Query:  GGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLQNDETERKEEAVF
        G GGGG    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAE+AARAYDRAA+ MRG+ A LNFP EY +   SS  + +SS  + +       VF
Subjt:  GGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSFESQSSSLQNDETERKEEAVF

Query:  EFECLDEKLLDELLDF
        EFE LD+ +LDELL++
Subjt:  EFECLDEKLLDELLDF

AT3G23220.1 Integrase-type DNA-binding superfamily protein7.7e-2955.93Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NVSSFESQSSSLQNDETERKEEAVFEF
        +KYRGVR+RPWGK+AAEIRDS+R G R+WLGTF TAE+AARAYDRAAF MRGQ A LNFP EY +M       + ++  S SS  +          V EF
Subjt:  VKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NVSSFESQSSSLQNDETERKEEAVFEF

Query:  ECLDEKLLDELLDFDKET
        E LD+ LL+ELLD+ + +
Subjt:  ECLDEKLLDELLDFDKET

AT3G23230.1 Integrase-type DNA-binding superfamily protein1.3e-3156.8Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNVSSFESQSSSLQNDETERKE
        D+  ++RGVRRRPWGKFAAEIRD SR G R+WLGTFETAEEAARAYDRAAF +RG LA LNFP EY          P    SS  S S S   + + + +
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNVSSFESQSSSLQNDETERKE

Query:  EAVFEFECLDEKLLDELLDFDKETK
          VFEFE LD+K+L+ELLD ++  +
Subjt:  EAVFEFECLDEKLLDELLDFDKETK

AT5G43410.1 Integrase-type DNA-binding superfamily protein2.2e-2858.12Show/hide
Query:  GGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN--VSSFESQSSSLQNDETERKEEA
        GG G G    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAEEAARAYD+AA+ MRGQ A LNFP EY + +   SS     SS  +         
Subjt:  GGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN--VSSFESQSSSLQNDETERKEEA

Query:  VFEFECLDEKLLDELLD
        VFEFE LD+ +L+ELL+
Subjt:  VFEFECLDEKLLDELLD

AT5G47220.1 ethylene responsive element binding factor 25.4e-2245.32Show/hide
Query:  TEMEDRRQRALEINGGGGGGGGDRCVK---YRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFP------EEYPLM
        T ME++ ++A+ +         +  VK   YRGVR+RPWGKFAAEIRD ++ G R+WLGTFETAE+AA AYD AAFRMRG  A LNFP      E  P+ 
Subjt:  TEMEDRRQRALEINGGGGGGGGDRCVK---YRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFP------EEYPLM

Query:  NVSSFESQSSSLQNDETERKEEAVFEFECLDEKLLDELL
          S   S SSS  +  T   E    +     E L  E++
Subjt:  NVSSFESQSSSLQNDETERKEEAVFEFECLDEKLLDELL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATGGAAGGAAAGCAAAATGAAAAAAGGCACAAATACCGAAATGGAAGATCGTCGCCAGAGAGCACTGGAGATCAACGGCGGGGGCGGAGGCGGAGGAGGA
GATAGGTGTGTGAAGTACAGAGGAGTACGGCGGCGGCCGTGGGGGAAGTTTGCCGCGGAGATTCGGGACTCGAGCCGGCGGGGGGTTCGGATTTGGCTGGGGACT
TTTGAGACGGCTGAAGAAGCGGCGAGAGCGTACGATCGAGCGGCTTTCAGAATGAGAGGCCAATTAGCCACTTTGAATTTTCCGGAGGAATATCCATTGATGAAC
GTTTCGAGCTTTGAATCTCAATCAAGTTCGTTGCAGAATGATGAAACAGAGAGAAAAGAAGAAGCGGTATTTGAGTTTGAGTGTTTGGATGAGAAATTGTTGGAT
GAACTTCTTGACTTTGACAAGGAAACCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATGGAAGGAAAGCAAAATGAAAAAAGGCACAAATACCGAAATGGAAGATCGTCGCCAGAGAGCACTGGAGATCAACGGCGGGGGCGGAGGCGGAGGAGGA
GATAGGTGTGTGAAGTACAGAGGAGTACGGCGGCGGCCGTGGGGGAAGTTTGCCGCGGAGATTCGGGACTCGAGCCGGCGGGGGGTTCGGATTTGGCTGGGGACT
TTTGAGACGGCTGAAGAAGCGGCGAGAGCGTACGATCGAGCGGCTTTCAGAATGAGAGGCCAATTAGCCACTTTGAATTTTCCGGAGGAATATCCATTGATGAAC
GTTTCGAGCTTTGAATCTCAATCAAGTTCGTTGCAGAATGATGAAACAGAGAGAAAAGAAGAAGCGGTATTTGAGTTTGAGTGTTTGGATGAGAAATTGTTGGAT
GAACTTCTTGACTTTGACAAGGAAACCAAGTGA
Protein sequenceShow/hide protein sequence
MRWKESKMKKGTNTEMEDRRQRALEINGGGGGGGGDRCVKYRGVRRRPWGKFAAEIRDSSRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN
VSSFESQSSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKETK