; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G172130 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G172130
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionF-box/kelch-repeat protein
Genome locationCicolChr09:8478334..8478735
RNA-Seq ExpressionCcUC09G172130
SyntenyCcUC09G172130
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3436009.1 hypothetical protein FNV43_RR23101 [Rhamnella rubrinervis]1.8e-3962.68Show/hide
Query:  MAQFSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSP----HRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPL-PPPASA--
        M +FSNL+SDLTELILS LPIP+L+R+S VC+LW SI+ SP+F +     +  + PWFFLYGLHNT+S +NQSFAFDPLS+ WFRLP FP+   PAS+  
Subjt:  MAQFSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSP----HRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPL-PPPASA--

Query:  --SDGFFFATTPHFSFSPIFNPSWTTTSPLRFSRINPLLGVF
          +DGFF  T P+F +S I   SW  TSPLRFSRINPLLGVF
Subjt:  --SDGFFFATTPHFSFSPIFNPSWTTTSPLRFSRINPLLGVF

XP_002521117.1 F-box/kelch-repeat protein At3g24760 [Ricinus communis]4.4e-3863.36Show/hide
Query:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPP-PASASDGFFFATT
        F++L+SDL ELILS LPIPSLLR+S+VCKLWHS++ +P+F S      PWFFL+GLHNT+S +NQSFAFDP S+ WFRLP FP P      S+GF F+T 
Subjt:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPP-PASASDGFFFATT

Query:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF
          FSFSP+  P W +TSPL FSRINPL+GVF
Subjt:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF

XP_012085139.1 F-box/kelch-repeat protein At3g24760 [Jatropha curcas]1.1e-3967.42Show/hide
Query:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFP-LPPPASASDGFFFATT
        F+ L+SDLTELILS LPIPSLLR+SAVCKLWHS++ +PSF S      PWFFL+GLHNT+S +NQSFAFDP SD WFRLPPFP L      S+GF F+T 
Subjt:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFP-LPPPASASDGFFFATT

Query:  P-HFSFSPIFNPSWTTTSPLRFSRINPLLGVF
        P  F FSP+  P W +TSPLRFSRINPL+GVF
Subjt:  P-HFSFSPIFNPSWTTTSPLRFSRINPLLGVF

XP_021631347.1 F-box/kelch-repeat protein At3g24760 [Manihot esculenta]1.1e-4167.94Show/hide
Query:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLP-PPASASDGFFFATT
        FS+++SDLTELILS LPIPSLLR+SAVCKLWHS++ +PSF S      PWFFL+GLHNT+S +NQSFAFDP S+ WFRLP FP P P    S+GF F+T 
Subjt:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLP-PPASASDGFFFATT

Query:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF
        P FSFSP+  P W +TSPL FSRINPLLGVF
Subjt:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF

XP_021646007.1 F-box/kelch-repeat protein At3g24760 [Hevea brasiliensis]3.6e-4065.65Show/hide
Query:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPP-PASASDGFFFATT
        F++L+SDLTELILS LPIPSLLR+S VCK WHS++ SPSF S      PWFFL+GLHNT+S +NQSFAFDP S+ WFR+P FP P      S+GF F+T 
Subjt:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPP-PASASDGFFFATT

Query:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF
        P FSFSP+  P W +TSPLRFSRINPL+GVF
Subjt:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF

TrEMBL top hitse value%identityAlignment
A0A067JR95 F-box domain-containing protein5.1e-4067.42Show/hide
Query:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFP-LPPPASASDGFFFATT
        F+ L+SDLTELILS LPIPSLLR+SAVCKLWHS++ +PSF S      PWFFL+GLHNT+S +NQSFAFDP SD WFRLPPFP L      S+GF F+T 
Subjt:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFP-LPPPASASDGFFFATT

Query:  P-HFSFSPIFNPSWTTTSPLRFSRINPLLGVF
        P  F FSP+  P W +TSPLRFSRINPL+GVF
Subjt:  P-HFSFSPIFNPSWTTTSPLRFSRINPLLGVF

A0A2C9UTL0 F-box domain-containing protein5.5e-4267.94Show/hide
Query:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLP-PPASASDGFFFATT
        FS+++SDLTELILS LPIPSLLR+SAVCKLWHS++ +PSF S      PWFFL+GLHNT+S +NQSFAFDP S+ WFRLP FP P P    S+GF F+T 
Subjt:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLP-PPASASDGFFFATT

Query:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF
        P FSFSP+  P W +TSPL FSRINPLLGVF
Subjt:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF

A0A2C9UTM1 F-box domain-containing protein5.5e-4267.94Show/hide
Query:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLP-PPASASDGFFFATT
        FS+++SDLTELILS LPIPSLLR+SAVCKLWHS++ +PSF S      PWFFL+GLHNT+S +NQSFAFDP S+ WFRLP FP P P    S+GF F+T 
Subjt:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLP-PPASASDGFFFATT

Query:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF
        P FSFSP+  P W +TSPL FSRINPLLGVF
Subjt:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF

A0A6A6K914 F-box domain-containing protein1.8e-4065.65Show/hide
Query:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPP-PASASDGFFFATT
        F++L+SDLTELILS LPIPSLLR+S VCK WHS++ SPSF S      PWFFL+GLHNT+S +NQSFAFDP S+ WFR+P FP P      S+GF F+T 
Subjt:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPP-PASASDGFFFATT

Query:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF
        P FSFSP+  P W +TSPLRFSRINPL+GVF
Subjt:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF

B9S548 F-box domain-containing protein2.1e-3863.36Show/hide
Query:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPP-PASASDGFFFATT
        F++L+SDL ELILS LPIPSLLR+S+VCKLWHS++ +P+F S      PWFFL+GLHNT+S +NQSFAFDP S+ WFRLP FP P      S+GF F+T 
Subjt:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPP-PASASDGFFFATT

Query:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF
          FSFSP+  P W +TSPL FSRINPL+GVF
Subjt:  PHFSFSPIFNPSWTTTSPLRFSRINPLLGVF

SwissProt top hitse value%identityAlignment
Q3EB08 F-box/kelch-repeat protein At3g247601.4e-3156.06Show/hide
Query:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRS-PSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPPP-ASASDGFFFAT
        F+NL  D+TE IL  LPIPSL+R + V K W S++ S P   SP    PPW FL+G+HNT+S  NQSFAFDPLS+ W RLPP          S+ F F T
Subjt:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRS-PSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPPP-ASASDGFFFAT

Query:  TPHFSFSPIFNPSWTTTSPLRFSRINPLLGVF
         P FSFSPI  P+W  TSP+RF RINPLL VF
Subjt:  TPHFSFSPIFNPSWTTTSPLRFSRINPLLGVF

Q9FII1 F-box/kelch-repeat protein At5g423601.1e-0431.65Show/hide
Query:  LTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRP---RPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRL
        L  D+ E+ L  LP+ SLL +  VCK W S+  +  FL   R    + PW FL+       +      +D   D W R+
Subjt:  LTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRP---RPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRL

Q9FII2 F-box/kelch-repeat protein At5g423501.1e-0431.65Show/hide
Query:  LTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRP---RPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRL
        L  D+ E+ L  LP+ SLL +  VCK W S+  +  FL   R    + PW FL+       +      +D   D W R+
Subjt:  LTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRP---RPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRL

Q9SMZ3 F-box only protein 135.1e-0537.5Show/hide
Query:  NLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSF---LSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRL
        +L  D+ E +LS LP     R S+VCK W S   S SF    S    R PWFF+      N +++ SF FD   + W  L
Subjt:  NLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSF---LSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRL

Arabidopsis top hitse value%identityAlignment
AT2G05970.1 F-box family protein with a domain of unknown function (DUF295)1.5e-0433.82Show/hide
Query:  AQFSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQS
        A +S L  D+   +  LL    L R+ +VC  WHS  R      P + + PW  L+  +N N+N+N S
Subjt:  AQFSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQS

AT3G24760.1 Galactose oxidase/kelch repeat superfamily protein1.0e-3256.06Show/hide
Query:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRS-PSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPPP-ASASDGFFFAT
        F+NL  D+TE IL  LPIPSL+R + V K W S++ S P   SP    PPW FL+G+HNT+S  NQSFAFDPLS+ W RLPP          S+ F F T
Subjt:  FSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRS-PSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPPP-ASASDGFFFAT

Query:  TPHFSFSPIFNPSWTTTSPLRFSRINPLLGVF
         P FSFSPI  P+W  TSP+RF RINPLL VF
Subjt:  TPHFSFSPIFNPSWTTTSPLRFSRINPLLGVF

AT4G33160.1 F-box family protein3.7e-0637.5Show/hide
Query:  NLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSF---LSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRL
        +L  D+ E +LS LP     R S+VCK W S   S SF    S    R PWFF+      N +++ SF FD   + W  L
Subjt:  NLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSF---LSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRL

AT5G42350.1 Galactose oxidase/kelch repeat superfamily protein8.1e-0631.65Show/hide
Query:  LTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRP---RPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRL
        L  D+ E+ L  LP+ SLL +  VCK W S+  +  FL   R    + PW FL+       +      +D   D W R+
Subjt:  LTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRP---RPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRL

AT5G42360.1 Galactose oxidase/kelch repeat superfamily protein8.1e-0631.65Show/hide
Query:  LTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRP---RPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRL
        L  D+ E+ L  LP+ SLL +  VCK W S+  +  FL   R    + PW FL+       +      +D   D W R+
Subjt:  LTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRP---RPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAATTTTCCAATCTCACCTCCGACTTGACCGAGCTCATCCTCTCTCTTCTTCCCATTCCCTCTCTCCTCCGCTCCTCCGCCGTCTGCAAACTCTGGCAC
TCCATTGTCCGATCACCGTCCTTCCTCTCTCCCCACCGCCCTCGACCTCCATGGTTCTTCCTCTACGGCCTCCACAACACGAACTCCAACGATAATCAATCCTTT
GCCTTCGATCCTCTCTCCGATTTCTGGTTCCGCCTCCCTCCCTTTCCACTTCCTCCTCCTGCCTCTGCCTCTGACGGCTTCTTCTTCGCCACCACGCCTCACTTC
TCTTTCTCTCCGATCTTCAATCCGTCTTGGACCACCACTTCGCCTCTAAGATTCTCACGGATCAACCCTCTCCTCGGCGTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCAATTTTCCAATCTCACCTCCGACTTGACCGAGCTCATCCTCTCTCTTCTTCCCATTCCCTCTCTCCTCCGCTCCTCCGCCGTCTGCAAACTCTGGCAC
TCCATTGTCCGATCACCGTCCTTCCTCTCTCCCCACCGCCCTCGACCTCCATGGTTCTTCCTCTACGGCCTCCACAACACGAACTCCAACGATAATCAATCCTTT
GCCTTCGATCCTCTCTCCGATTTCTGGTTCCGCCTCCCTCCCTTTCCACTTCCTCCTCCTGCCTCTGCCTCTGACGGCTTCTTCTTCGCCACCACGCCTCACTTC
TCTTTCTCTCCGATCTTCAATCCGTCTTGGACCACCACTTCGCCTCTAAGATTCTCACGGATCAACCCTCTCCTCGGCGTTTTCTGA
Protein sequenceShow/hide protein sequence
MAQFSNLTSDLTELILSLLPIPSLLRSSAVCKLWHSIVRSPSFLSPHRPRPPWFFLYGLHNTNSNDNQSFAFDPLSDFWFRLPPFPLPPPASASDGFFFATTPHF
SFSPIFNPSWTTTSPLRFSRINPLLGVF