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CcUC09G173000 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G173000
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCytochrom_C_asm domain-containing protein
Genome locationCicolChr09:9464686..9466852
RNA-Seq ExpressionCcUC09G173000
SyntenyCcUC09G173000
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO74044.1 ORF50f [Pinus koraiensis]2.0e-0470Show/hide
Query:  PVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSS
        P Y  GEPVNTSAT+KG D+K SIF A AT K+SSS+NSS
Subjt:  PVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSS
KCW90640.1 hypothetical protein EUGRSUZ_A02744 [Eucalyptus grandis]3.7e-0672.5Show/hide
Query:  PVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSS
        P YF GE +NTSAT+KGWDKK SIF A AT K+SSS+NSS
Subjt:  PVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSS
PLY90581.1 hypothetical protein LSAT_6X37840 [Lactuca sativa]3.5e-0444.83Show/hide
Query:  SLFVKSGFVTLLASILD--LLYLTFYSSCLW---------PVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSSKYSYNVL
        S F  S F+  +  +L+  LL  +F  S L          P YF GEPVNTS T+KG DKK SIF A AT K+SSS+NSS     ++
Subjt:  SLFVKSGFVTLLASILD--LLYLTFYSSCLW---------PVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSSKYSYNVL
TrEMBL top hitse value%identityAlignment
A0A059DJQ4 Uncharacterized protein1.8e-0672.5Show/hide
Query:  PVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSS
        P YF GE +NTSAT+KGWDKK SIF A AT K+SSS+NSS
Subjt:  PVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSS
A0A2J6LTA0 Cytochrom_C_asm domain-containing protein1.7e-0444.83Show/hide
Query:  SLFVKSGFVTLLASILD--LLYLTFYSSCLW---------PVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSSKYSYNVL
        S F  S F+  +  +L+  LL  +F  S L          P YF GEPVNTS T+KG DKK SIF A AT K+SSS+NSS     ++
Subjt:  SLFVKSGFVTLLASILD--LLYLTFYSSCLW---------PVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSSKYSYNVL
Q85X22 ORF50f9.9e-0570Show/hide
Query:  PVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSS
        P Y  GEPVNTSAT+KG D+K SIF A AT K+SSS+NSS
Subjt:  PVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGGCCAATGGAGTGAAGTCATGCGCTAAGCTGCTGAAGTCTTCAGAATCATTGTTCGTGAAATCAGGTTTCGTCACTTTGTTAGCTAGCATTTTAGATTTACT
TTACCTTACGTTTTACAGTTCCTGCCTATGGCCAGTGTATTTCCTGGGGGAACCAGTAAATACTTCTGCTACGAGAAAAGGTTGGGATAAGAAACACTCAATTTTTCATG
CTCGTGCTACGTTTAAGCAATCCTCTTCGAATAATTCATCCAAGTATAGCTATAATGTCCTGCAGTTCTTTGTATTGTTGGCCTCTGGAAAGCTATTTTCTTCTCTCTCT
TTAGCATTATATACCAATTCCTCGAGGGAAACTTTCTGCGATGTGTTAAATGTCGAAGTTGGTCAAGTTCCATTTCTTAAGGGCAGATTTCAACCCTTTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTGGCCAATGGAGTGAAGTCATGCGCTAAGCTGCTGAAGTCTTCAGAATCATTGTTCGTGAAATCAGGTTTCGTCACTTTGTTAGCTAGCATTTTAGATTTACT
TTACCTTACGTTTTACAGTTCCTGCCTATGGCCAGTGTATTTCCTGGGGGAACCAGTAAATACTTCTGCTACGAGAAAAGGTTGGGATAAGAAACACTCAATTTTTCATG
CTCGTGCTACGTTTAAGCAATCCTCTTCGAATAATTCATCCAAGTATAGCTATAATGTCCTGCAGTTCTTTGTATTGTTGGCCTCTGGAAAGCTATTTTCTTCTCTCTCT
TTAGCATTATATACCAATTCCTCGAGGGAAACTTTCTGCGATGTGTTAAATGTCGAAGTTGGTCAAGTTCCATTTCTTAAGGGCAGATTTCAACCCTTTTATTAA
Protein sequenceShow/hide protein sequence
MSLANGVKSCAKLLKSSESLFVKSGFVTLLASILDLLYLTFYSSCLWPVYFLGEPVNTSATRKGWDKKHSIFHARATFKQSSSNNSSKYSYNVLQFFVLLASGKLFSSLS
LALYTNSSRETFCDVLNVEVGQVPFLKGRFQPFY