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CcUC09G176790 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G176790
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionNADH dehydrogenase subunit 4L
Genome locationCicolChr09:19248963..19250427
RNA-Seq ExpressionCcUC09G176790
SyntenyCcUC09G176790
Gene Ontology termsGO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0009536 - plastid (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domainsIPR001133 - NADH-ubiquinone oxidoreductase chain 4L/K


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8364974.1 hypothetical protein HHK36_033070 [Tetracentron sinense]2.3e-3443.21Show/hide
Query:  LQHSGPGAFNCLFSSFTNEPTGVPINRATRFENKVGSLDLVAGESLIKDQILERFFIDLVAGESLIKERAAAR--------------------RRL----
        L  +GPG          +EPTGVPI+RATRFENKVGSLD+VAGESLIK+QILERFFIDLVAGESLIKERAAAR                    RR     
Subjt:  LQHSGPGAFNCLFSSFTNEPTGVPINRATRFENKVGSLDLVAGESLIKDQILERFFIDLVAGESLIKERAAAR--------------------RRL----

Query:  ---------------------SVSDG-KIPTVGISLKVKTKPAIKMKSACLGLDLGKLDG----------------------------------------
                              V  G  +   G    +  +P I  + A     +  ++                                         
Subjt:  ---------------------SVSDG-KIPTVGISLKVKTKPAIKMKSACLGLDLGKLDG----------------------------------------

Query:  ----------------IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFL
                        IRGILLNRRNIPIMSMPIESMLLAVNSNFLVF VSSDDMMGQ FASLVPTVAA ESAIG   F+
Subjt:  ----------------IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFL

KAF8364977.1 hypothetical protein HHK36_033075 [Tetracentron sinense]1.4e-3952.19Show/hide
Query:  LQHSGPGAFNCLFSSFTNEPTGVPINRATRFENKVGSLDLVAGESLIKDQILERFFIDLVAGESLIKERAAAR-------------------------RR
        L  +GPG          +EPTGVPI+RATRFENKVGSLD+VAGESLIK+QILERFFIDLVAGESLIKERAAAR                          R
Subjt:  LQHSGPGAFNCLFSSFTNEPTGVPINRATRFENKVGSLDLVAGESLIKDQILERFFIDLVAGESLIKERAAAR-------------------------RR

Query:  LSVSDGKIPTVGISLKVKTKP-------------------AIKMKSACLGLDLGKLDG------IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSS
          +   KI            P                   +I  +   +       +G      IRGILLNRRNIPIMSMPIESMLLAVNSNFLVF VSS
Subjt:  LSVSDGKIPTVGISLKVKTKP-------------------AIKMKSACLGLDLGKLDG------IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSS

Query:  DDMMGQSFASLVPTVAAVESAIGVRAFL
        DDMMGQ FASLVPTVAA ESAIG   F+
Subjt:  DDMMGQSFASLVPTVAAVESAIGVRAFL

KAG4911410.1 hypothetical protein JHK85_058317 [Glycine max]4.4e-2562.02Show/hide
Query:  IKMKSACLGLDLGKLDGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAF--------------------
        I M S   G   G++ GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVF VSSDDMMGQSFASLV TVAA ESAIG+  F                    
Subjt:  IKMKSACLGLDLGKLDGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAF--------------------

Query:  -----LAGRAHPIRKSFPKPLPVLLLKSR
             L  R   IRKSFPKPLPV LLK R
Subjt:  -----LAGRAHPIRKSFPKPLPVLLLKSR

KAG5128813.1 hypothetical protein JHK84_035210 [Glycine max]4.4e-2562.02Show/hide
Query:  IKMKSACLGLDLGKLDGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAF--------------------
        I M S   G   G++ GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVF VSSDDMMGQSFASLV TVAA ESAIG+  F                    
Subjt:  IKMKSACLGLDLGKLDGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAF--------------------

Query:  -----LAGRAHPIRKSFPKPLPVLLLKSR
             L  R   IRKSFPKPLPV LLK R
Subjt:  -----LAGRAHPIRKSFPKPLPVLLLKSR

KAG6467790.1 hypothetical protein ZIOFF_074301 [Zingiber officinale]5.3e-3189.89Show/hide
Query:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFLAGRAHPIRKSFPKPLPVLLLKSRE
        GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVF VSSDDMMGQSFASLV TVAA ESAIG RAFLA RAHPI K FPKPLPV LLK RE
Subjt:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFLAGRAHPIRKSFPKPLPVLLLKSRE

TrEMBL top hitse value%identityAlignment
A0A2G3BE29 Photosystem I P700 chlorophyll a apoprotein A13.7e-2268.32Show/hide
Query:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFL---------AGRAHPIRKSF--PKPLPVLLLKSRE
        GIRGILLNRRNIPIMSMPIESMLLA+NSNFLVF VSS+DMMGQSFASLVP VAA ESAIG+  F+             H IR+SF   KPLP+ LLK R+
Subjt:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFL---------AGRAHPIRKSF--PKPLPVLLLKSRE

Query:  K
        +
Subjt:  K

A0A4D8XMS0 ATP synthase protein MI251.1e-2488.61Show/hide
Query:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFLAGRAHPI---RKSF
        GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVF VSSDDMMGQ FA LV TVAA ESAIGVRAFLAGRAHPI   RK F
Subjt:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFLAGRAHPI---RKSF

A0A4D8Y5T9 ATP synthase protein MI258.6e-3590.43Show/hide
Query:  GKLDGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFLAGRAHPIRKSFPKPLPVLLLKSREK
        G+L  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVF VSSDDMMGQSFASLV TVAA ESAIGVRAFLAGRAHPIRKSFPKPLPV LLK R+K
Subjt:  GKLDGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFLAGRAHPIRKSFPKPLPVLLLKSREK

A0A4D8YNT5 ATP synthase protein MI258.6e-3590.43Show/hide
Query:  GKLDGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFLAGRAHPIRKSFPKPLPVLLLKSREK
        G+L  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVF VSSDDMMGQSFASLV TVAA ESAIGVRAFLAGRAHPIRKSFPKPLPV LLK R+K
Subjt:  GKLDGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFLAGRAHPIRKSFPKPLPVLLLKSREK

A0A6A5LBZ9 Uncharacterized protein2.3e-2464.71Show/hide
Query:  DGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAF-------------------------LAGRAHPIRK
        D IRGILLNRRNIPIMSMPIESMLLAVNSNFLVF VSSDDMMGQSFASLV TVAA ESAIG+  F                         L  R   I K
Subjt:  DGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAF-------------------------LAGRAHPIRK

Query:  SFPKPLPVLLLKSREKLHK
        SFPKPLPV LLK RE L K
Subjt:  SFPKPLPVLLLKSREKLHK

SwissProt top hitse value%identityAlignment
P26851 NADH-ubiquinone oxidoreductase chain 4L2.6e-1272.13Show/hide
Query:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGV
        GI GI LNR+NI IM M IE MLLAVN NFLVF V  DDMMGQ FA  V TVAA ESAIG+
Subjt:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGV

Q04614 NADH-ubiquinone oxidoreductase chain 4L1.9e-1576.92Show/hide
Query:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFL
        GI GILLNRRNI IM M IE MLLAVNSNFLVF VS DDMMGQ FA LV TVAA ESAIG+  F+
Subjt:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFL

Q37598 NADH-ubiquinone oxidoreductase chain 4L3.5e-0955.74Show/hide
Query:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGV
        G+ GI+LNR+NI I+ M IE +LL++N NF+ F V  DD++GQ F+ L+ TVAA ESAIG+
Subjt:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGV

Q37627 NADH-ubiquinone oxidoreductase chain 4L4.9e-1165.57Show/hide
Query:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGV
        GI GI LNR+NI +M M IE MLLAVN NFL+F V  DD +GQ FA L+ TVAA ESAIG+
Subjt:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGV

Q6N5N4 NADH-quinone oxidoreductase subunit K 13.0e-0855.74Show/hide
Query:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGV
        G  GI LNR+N+ I+ M IE MLLAVN N + F +  +D++GQ FA LV TVAA E+AIG+
Subjt:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGV

Arabidopsis top hitse value%identityAlignment
ATMG00650.1 NADH dehydrogenase subunit 4L1.5e-2389.23Show/hide
Query:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFL
        GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVF VSSDDMMGQ FASLVPTVAA ESAIG+  F+
Subjt:  GIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAAGGTTCAGATTGAAGATCTTCGCAAGAAGGCCCATGAATCTCGAGAATCGAGCGTGGGGCTTGAAGACCCTACAGCATTCCGGCCCCGGGGCCTTTAAT
TGTCTTTTCTCCTCTTTCACCAATGAGCCTACAGGAGTGCCAATCAACCGAGCCACCAGGTTTGAGAATAAGGTGGGATCACTGGATCTAGTGGCCGGTGAATCA
CTGATCAAAGATCAAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCTGCCGCCAGAAGACGACTGTCGGTATCTGAT
GGTAAGATACCTACGGTCGGTATATCTTTGAAAGTGAAGACGAAGCCCGCTATTAAAATGAAGTCTGCCTGTCTAGGACTAGATCTTGGGAAACTCGATGGAATT
CGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCCAACTTTTTGGTATTTTTCGTTTCTTCG
GATGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCTGTAGAATCCGCTATTGGGGTCAGGGCCTTTCTCGCTGGGCGAGCGCATCCGATT
CGAAAGTCCTTTCCTAAACCACTTCCCGTTCTGTTGCTGAAATCTCGAGAAAAGCTTCATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAAGGTTCAGATTGAAGATCTTCGCAAGAAGGCCCATGAATCTCGAGAATCGAGCGTGGGGCTTGAAGACCCTACAGCATTCCGGCCCCGGGGCCTTTAAT
TGTCTTTTCTCCTCTTTCACCAATGAGCCTACAGGAGTGCCAATCAACCGAGCCACCAGGTTTGAGAATAAGGTGGGATCACTGGATCTAGTGGCCGGTGAATCA
CTGATCAAAGATCAAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCTGCCGCCAGAAGACGACTGTCGGTATCTGAT
GGTAAGATACCTACGGTCGGTATATCTTTGAAAGTGAAGACGAAGCCCGCTATTAAAATGAAGTCTGCCTGTCTAGGACTAGATCTTGGGAAACTCGATGGAATT
CGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCCAACTTTTTGGTATTTTTCGTTTCTTCG
GATGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCTGTAGAATCCGCTATTGGGGTCAGGGCCTTTCTCGCTGGGCGAGCGCATCCGATT
CGAAAGTCCTTTCCTAAACCACTTCCCGTTCTGTTGCTGAAATCTCGAGAAAAGCTTCATAAATGA
Protein sequenceShow/hide protein sequence
MRRFRLKIFARRPMNLENRAWGLKTLQHSGPGAFNCLFSSFTNEPTGVPINRATRFENKVGSLDLVAGESLIKDQILERFFIDLVAGESLIKERAAARRRLSVSD
GKIPTVGISLKVKTKPAIKMKSACLGLDLGKLDGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSSDDMMGQSFASLVPTVAAVESAIGVRAFLAGRAHPI
RKSFPKPLPVLLLKSREKLHK