; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G177380 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G177380
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 2, chloroplastic
Genome locationCicolChr09:22616238..22628482
RNA-Seq ExpressionCcUC09G177380
SyntenyCcUC09G177380
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit
IPR001865 - Ribosomal protein S2
IPR005679 - Ribosomal protein S12, bacterial-type
IPR005706 - Ribosomal protein S2, bacteria/mitochondria/plastid
IPR006032 - Ribosomal protein S12/S23
IPR012340 - Nucleic acid-binding, OB-fold
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AES69829.1 NAD(P)H-quinone oxidoreductase subunit 2 [Medicago truncatula]3.3e-9841.01Show/hide
Query:  VARVRLTSGFEITAYIPGIGHNLQEHSTVLVRGGRVKDLPGVRYHIVRGTLDAVGVKD------------------------------------------
        VARVRLTSGFEITAYIPGIGHNLQEHS VLVRGGRVKDLPGVRYHIVRGTLDAVGVKD                                          
Subjt:  VARVRLTSGFEITAYIPGIGHNLQEHSTVLVRGGRVKDLPGVRYHIVRGTLDAVGVKD------------------------------------------

Query:  ---------------------PIRGVTLDIAV--KARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI------
                              IRGVT DIAV  K RRV G   +VP+EIGSTQGKALAIRWLLGASRKR GRNMAFKLSSELVDAAKGSGDAI      
Subjt:  ---------------------PIRGVTLDIAV--KARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------SPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA-------
                                                                  + ECFSLCSYLLSGYTKKDVRSNEAT KYLLMGGA       
Subjt:  ----------------------------------------------------------SPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA-------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGI
                                          +AASASATRIFDI FYFSSNEWHLLLEILAILSM+LGNLIAITQT MKRMLAYSSI QIGYVIIGI
Subjt:  ----------------------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGI

Query:  IVGDLNGGYASMITYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        IVGD N GYASMITYMLFYI+MNLGTF+ IV FGLRTGTDNIRDYAGLYTKDP  ALSLALCLLSLGGLPPLA
Subjt:  IVGDLNGGYASMITYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

KAG6735404.1 hypothetical protein POTOM_062051 [Populus tomentosa]1.4e-9655.47Show/hide
Query:  IRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI------------------------------
        IRGVT DIAVKARRVGG THQVPIEIGSTQGKALAIRWLLGASRKR GRNM FKLSSELVDAAKGSGDAI                              
Subjt:  IRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI------------------------------

Query:  ---------------------------SPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA--------------------------------------
                                   +PECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA                                      
Subjt:  ---------------------------SPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA--------------------------------------

Query:  ------------------------------------------------------------------------IAASASATRIFDIPFYFSSNEWHLLLEI
                                                                                +AASASATRIFDIPFYFSSNEWHLLLEI
Subjt:  ------------------------------------------------------------------------IAASASATRIFDIPFYFSSNEWHLLLEI

Query:  LAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMITYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALC
        LAILSMI+GNLIAITQT MKRMLAYSSI QIGYVIIGIIVGD NGGYASMITYMLFYI+MNLGTF+ IV FGLRTGTDNIRDYAGLYTKDP  ALSLALC
Subjt:  LAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMITYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALC

Query:  LLSLGGLPPLA
        LLSLGGLPPLA
Subjt:  LLSLGGLPPLA

QCE13751.1 NADH dehydrogenase I subunit 2 [Vigna unguiculata]2.1e-9249.78Show/hide
Query:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI--------------------------
        ++  IRGVT DIAVKARRVGG THQVPIEIGSTQGKALAIRWLLGASRKR GRNM FKLSSELVDAA GSGDAI                          
Subjt:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI--------------------------

Query:  ------------SPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA-----------------------------------------------------
                    +PECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA                                                     
Subjt:  ------------SPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMI
                             +AASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQT MKRMLAYSSI QIGYVIIGIIVGD NGGYASMI
Subjt:  ---------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMI

Query:  TYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        TYMLFYI+MNLGTF+ IVSFGLRTGTDNIRDYAGLYTKDP+ ALSLALCLLSLGGLPPLA
Subjt:  TYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

RDY14313.1 NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic, partial [Mucuna pruriens]4.1e-10443.28Show/hide
Query:  VARVRLTSGFEITAYIPGIGHNLQEHSTVLVRGGRVKDLPGVRYHIVRGTLDAVGVKD------------------------------------------
        VARVRLTSGFEITAYIPGIGHNLQEHS VLVRGGRVKDLPGVRYHIVRGTLDAVGVKD                                          
Subjt:  VARVRLTSGFEITAYIPGIGHNLQEHSTVLVRGGRVKDLPGVRYHIVRGTLDAVGVKD------------------------------------------

Query:  --------------------------------------------------PIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGR
                                                           IRGVT DIAVKARRVGG THQVPIEIGSTQGKALAIRWLLGASRKR GR
Subjt:  --------------------------------------------------PIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGR

Query:  NMAFKLSSEL-----------------------------------------VDAAKGSGDA---------------------------------------
        NMAFKLSSEL                                         +D+     D                                        
Subjt:  NMAFKLSSEL-----------------------------------------VDAAKGSGDA---------------------------------------

Query:  ---------------------------------------------------------ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA-------
                                                                 ++ ECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA       
Subjt:  ---------------------------------------------------------ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA-------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMITYMLFYIAMNLGTFSRIVSF
         +AASASATRIFDIPFYFSSNEWHLLLEILAILSMI GNLIAITQT MKRMLAYSSI QIGYVIIGIIVGD NGGYASMITYMLFYI+MNLGTF+ IVSF
Subjt:  -IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMITYMLFYIAMNLGTFSRIVSF

Query:  GLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        GLRTGTDNIRDYAGLYTKDP  ALSLALCLLSLGGLPPLA
Subjt:  GLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

RWR98290.1 NADPH-quinone oxidoreductase subunit 2 [Cinnamomum micranthum f. kanehirae]1.5e-8546.52Show/hide
Query:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI--------------------------
        ++  IRGVT DIAVKARRVGG THQVPIEI STQGKALAIRWLLGASRKR GRNMAFKLSSELVDAAKGSGDAI                          
Subjt:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI--------------------------

Query:  -------------------------------------------------------------------------------SPECFSLCSYLLSGYTKKDVR
                                                                                       +PE FSLCSYLLSGYTK+DVR
Subjt:  -------------------------------------------------------------------------------SPECFSLCSYLLSGYTKKDVR

Query:  SNEATTKYLLMGGA--------------------------------------------------------------------------------------
        SNEATTKYLLMGGA                                                                                      
Subjt:  SNEATTKYLLMGGA--------------------------------------------------------------------------------------

Query:  ------------------------------------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLA
                                                        +AASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQT MKRMLA
Subjt:  ------------------------------------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLA

Query:  Y-SSISQIGYVIIGIIVGDLNGGYASMITYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        Y SSI QIGYVIIGIIVGD N GYASMITYMLFYI+MNLGTF+RIVSFGLRTGTDNIRDYAGLYTKDP  ALS ALCLLSLGGLPPLA
Subjt:  Y-SSISQIGYVIIGIIVGDLNGGYASMITYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

TrEMBL top hitse value%identityAlignment
A0A371IH37 Ribosomal protein S7 (Fragment)2.0e-10443.28Show/hide
Query:  VARVRLTSGFEITAYIPGIGHNLQEHSTVLVRGGRVKDLPGVRYHIVRGTLDAVGVKD------------------------------------------
        VARVRLTSGFEITAYIPGIGHNLQEHS VLVRGGRVKDLPGVRYHIVRGTLDAVGVKD                                          
Subjt:  VARVRLTSGFEITAYIPGIGHNLQEHSTVLVRGGRVKDLPGVRYHIVRGTLDAVGVKD------------------------------------------

Query:  --------------------------------------------------PIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGR
                                                           IRGVT DIAVKARRVGG THQVPIEIGSTQGKALAIRWLLGASRKR GR
Subjt:  --------------------------------------------------PIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGR

Query:  NMAFKLSSEL-----------------------------------------VDAAKGSGDA---------------------------------------
        NMAFKLSSEL                                         +D+     D                                        
Subjt:  NMAFKLSSEL-----------------------------------------VDAAKGSGDA---------------------------------------

Query:  ---------------------------------------------------------ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA-------
                                                                 ++ ECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA       
Subjt:  ---------------------------------------------------------ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA-------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMITYMLFYIAMNLGTFSRIVSF
         +AASASATRIFDIPFYFSSNEWHLLLEILAILSMI GNLIAITQT MKRMLAYSSI QIGYVIIGIIVGD NGGYASMITYMLFYI+MNLGTF+ IVSF
Subjt:  -IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMITYMLFYIAMNLGTFSRIVSF

Query:  GLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        GLRTGTDNIRDYAGLYTKDP  ALSLALCLLSLGGLPPLA
Subjt:  GLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

A0A3S3RBG4 Ribosomal protein S77.1e-8646.52Show/hide
Query:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI--------------------------
        ++  IRGVT DIAVKARRVGG THQVPIEI STQGKALAIRWLLGASRKR GRNMAFKLSSELVDAAKGSGDAI                          
Subjt:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI--------------------------

Query:  -------------------------------------------------------------------------------SPECFSLCSYLLSGYTKKDVR
                                                                                       +PE FSLCSYLLSGYTK+DVR
Subjt:  -------------------------------------------------------------------------------SPECFSLCSYLLSGYTKKDVR

Query:  SNEATTKYLLMGGA--------------------------------------------------------------------------------------
        SNEATTKYLLMGGA                                                                                      
Subjt:  SNEATTKYLLMGGA--------------------------------------------------------------------------------------

Query:  ------------------------------------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLA
                                                        +AASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQT MKRMLA
Subjt:  ------------------------------------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLA

Query:  Y-SSISQIGYVIIGIIVGDLNGGYASMITYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        Y SSI QIGYVIIGIIVGD N GYASMITYMLFYI+MNLGTF+RIVSFGLRTGTDNIRDYAGLYTKDP  ALS ALCLLSLGGLPPLA
Subjt:  Y-SSISQIGYVIIGIIVGDLNGGYASMITYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

A0A4D6NLD9 NADH dehydrogenase I subunit 21.0e-9249.78Show/hide
Query:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI--------------------------
        ++  IRGVT DIAVKARRVGG THQVPIEIGSTQGKALAIRWLLGASRKR GRNM FKLSSELVDAA GSGDAI                          
Subjt:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI--------------------------

Query:  ------------SPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA-----------------------------------------------------
                    +PECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA                                                     
Subjt:  ------------SPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMI
                             +AASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQT MKRMLAYSSI QIGYVIIGIIVGD NGGYASMI
Subjt:  ---------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMI

Query:  TYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        TYMLFYI+MNLGTF+ IVSFGLRTGTDNIRDYAGLYTKDP+ ALSLALCLLSLGGLPPLA
Subjt:  TYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

A0A6A5L3Z2 Uncharacterized protein2.7e-7768.63Show/hide
Query:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAISPECFSLCSYLLSGYTKKDVR-----
        ++  IRGVT DIAVKARRVGG THQVPIEIGSTQGKALAIRW         G  +   L  E +   + +   +   C            KK+VR     
Subjt:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAISPECFSLCSYLLSGYTKKDVR-----

Query:  --SNEATTKYLLMGGAIAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMITYMLF
          S      +L +   +AASASATRIFDIPFYFSSNEWHLLLEILAI SMILGNLIAITQT MKRMLAYSSI QIGYVIIGIIVGD NGGYASMITYMLF
Subjt:  --SNEATTKYLLMGGAIAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMITYMLF

Query:  YIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        YI+MNLGTF+ IVSFGLRTGTDNIRDYAGLYTKDP  ALSLALCLLSLGGLPPLA
Subjt:  YIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

G7J101 Ribosomal protein S71.6e-9841.01Show/hide
Query:  VARVRLTSGFEITAYIPGIGHNLQEHSTVLVRGGRVKDLPGVRYHIVRGTLDAVGVKD------------------------------------------
        VARVRLTSGFEITAYIPGIGHNLQEHS VLVRGGRVKDLPGVRYHIVRGTLDAVGVKD                                          
Subjt:  VARVRLTSGFEITAYIPGIGHNLQEHSTVLVRGGRVKDLPGVRYHIVRGTLDAVGVKD------------------------------------------

Query:  ---------------------PIRGVTLDIAV--KARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI------
                              IRGVT DIAV  K RRV G   +VP+EIGSTQGKALAIRWLLGASRKR GRNMAFKLSSELVDAAKGSGDAI      
Subjt:  ---------------------PIRGVTLDIAV--KARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------SPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA-------
                                                                  + ECFSLCSYLLSGYTKKDVRSNEAT KYLLMGGA       
Subjt:  ----------------------------------------------------------SPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA-------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGI
                                          +AASASATRIFDI FYFSSNEWHLLLEILAILSM+LGNLIAITQT MKRMLAYSSI QIGYVIIGI
Subjt:  ----------------------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGI

Query:  IVGDLNGGYASMITYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        IVGD N GYASMITYMLFYI+MNLGTF+ IV FGLRTGTDNIRDYAGLYTKDP  ALSLALCLLSLGGLPPLA
Subjt:  IVGDLNGGYASMITYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

SwissProt top hitse value%identityAlignment
P0CC40 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic7.1e-7563.32Show/hide
Query:  ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA----------------------------------------------------------------
        ++PECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA                                                                
Subjt:  ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA----------------------------------------------------------------

Query:  --------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMIT
                            +AASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQT MKRMLAYSSI QIGYVIIGIIVGD NGGYASMIT
Subjt:  --------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMIT

Query:  YMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        YMLFYI+MNLGTF+ IVSFGLRTGTDNIRDYAGLYTKDP  ALSLALCLLSLGGLPPLA
Subjt:  YMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

P0CC50 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic6.4e-7664.09Show/hide
Query:  ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA----------------------------------------------------------------
        ++PECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA                                                                
Subjt:  ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA----------------------------------------------------------------

Query:  --------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMIT
                            +AASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQT MKRMLAYSSI QIGYVIIGIIVGD NGGYASMIT
Subjt:  --------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMIT

Query:  YMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        YMLFYIAMNLGTF+RIVSFGLRTGTDNIRDYAGLYTKDP  ALSLALCLLSLGGLPPLA
Subjt:  YMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

P0CC51 NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic6.4e-7664.09Show/hide
Query:  ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA----------------------------------------------------------------
        ++PECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA                                                                
Subjt:  ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA----------------------------------------------------------------

Query:  --------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMIT
                            +AASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQT MKRMLAYSSI QIGYVIIGIIVGD NGGYASMIT
Subjt:  --------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMIT

Query:  YMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        YMLFYIAMNLGTF+RIVSFGLRTGTDNIRDYAGLYTKDP  ALSLALCLLSLGGLPPLA
Subjt:  YMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

P0CD56 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic7.1e-7563.32Show/hide
Query:  ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA----------------------------------------------------------------
        ++PECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA                                                                
Subjt:  ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA----------------------------------------------------------------

Query:  --------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMIT
                            +AASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQT MKRMLAYSSI QIGYVIIGIIVGD NGGYASMIT
Subjt:  --------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMIT

Query:  YMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        YMLFYI+MNLGTF+ IVSFGLRTGTDNIRDYAGLYTKDP  ALSLALCLLSLGGLPPLA
Subjt:  YMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

Q4VZP4 30S ribosomal protein S2, chloroplastic4.9e-7697.87Show/hide
Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAA+RGKQFLIVGTKNKAADSVARAATR RCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLG
        TRLHKFRDLRTEQKTGGLNRLPKRDAAM KRQLSHLQTYLG
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLG

Arabidopsis top hitse value%identityAlignment
ATCG00160.1 ribosomal protein S22.6e-7292.91Show/hide
Query:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE
        MM AGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAAD V+RAA RARCHYVNKKWLGGMLTNWSTTE
Subjt:  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTE

Query:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLG
         RLHKFRDLRTEQKT G NRLPKRDAA+LKRQLS L+TYLG
Subjt:  TRLHKFRDLRTEQKTGGLNRLPKRDAAMLKRQLSHLQTYLG

ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein2.8e-7461.78Show/hide
Query:  ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA----------------------------------------------------------------
        ++PECFSLCSYLLSGYTKKD+RSNEAT KYLLMGGA                                                                
Subjt:  ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA----------------------------------------------------------------

Query:  --------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMIT
                            +AASASATRIFDIPFYFSSNEWHLLLEILAILSMI GNLIAITQT MKRMLAYSSI QIGYVIIGIIVGD NGGYASMIT
Subjt:  --------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMIT

Query:  YMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        YMLFYIAMNLGTF+ I+ FGLRTGTDNIRDYAGLYTKDP  ALSLALCLLSLGGLPPLA
Subjt:  YMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA

ATCG00900.1 Ribosomal protein S7p/S5e family protein5.4e-3090.54Show/hide
Query:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI
        ++  IRGVT DIAVKARRVGG THQVPIEIGSTQGKALAIRWLLGASRKR GRNMAFKLSSELVDAAKGSGDAI
Subjt:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI

ATCG01240.1 ribosomal protein S75.4e-3090.54Show/hide
Query:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI
        ++  IRGVT DIAVKARRVGG THQVPIEIGSTQGKALAIRWLLGASRKR GRNMAFKLSSELVDAAKGSGDAI
Subjt:  VKDPIRGVTLDIAVKARRVGGLTHQVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAI

ATCG01250.1 NADH-Ubiquinone/plastoquinone (complex I) protein2.8e-7461.78Show/hide
Query:  ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA----------------------------------------------------------------
        ++PECFSLCSYLLSGYTKKD+RSNEAT KYLLMGGA                                                                
Subjt:  ISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGA----------------------------------------------------------------

Query:  --------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMIT
                            +AASASATRIFDIPFYFSSNEWHLLLEILAILSMI GNLIAITQT MKRMLAYSSI QIGYVIIGIIVGD NGGYASMIT
Subjt:  --------------------IAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMIT

Query:  YMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA
        YMLFYIAMNLGTF+ I+ FGLRTGTDNIRDYAGLYTKDP  ALSLALCLLSLGGLPPLA
Subjt:  YMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGLPPLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGGTATTCATATTATCAATCTTACTAG
AACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGAAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCC
GGGCAGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGCTGGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGAGA
ACGGAACAAAAGACGGGGGGACTCAACCGTCTTCCGAAAAGGGATGCCGCTATGTTGAAGAGACAATTATCTCACTTGCAAACATATCTGGGCGTTGCCAGAGTACGCTT
AACCTCGGGATTTGAAATCACTGCTTATATACCTGGTATTGGCCATAATTTACAAGAACATTCTACAGTCTTAGTAAGAGGGGGAAGGGTTAAGGATTTACCCGGTGTGA
GATATCACATTGTTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCCAATACGTGGAGTAACTCTCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATTAACTCAT
CAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTTCGGGTCGAAATATGGCTTTCAAATTAAGTTC
CGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATATCTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAATG
AGGCTACTACGAAATATTTACTCATGGGTGGGGCAATAGCTGCTTCAGCTTCAGCCACTCGAATTTTCGATATTCCTTTTTATTTCTCATCAAACGAATGGCATCTTCTT
CTGGAAATCCTAGCTATTCTTAGCATGATATTGGGGAATCTCATTGCTATTACTCAAACATGCATGAAACGTATGCTTGCGTATTCGTCCATCAGTCAAATCGGATATGT
AATTATTGGAATAATTGTTGGAGACTTAAATGGTGGATATGCAAGCATGATAACTTACATGCTGTTCTATATCGCCATGAATCTAGGAACTTTTTCTCGCATTGTATCAT
TTGGTCTACGTACCGGAACTGATAACATTCGAGATTATGCAGGATTATACACAAAAGATCCTCATTGGGCTCTCTCTTTAGCCCTATGTCTCTTATCCTTAGGAGGTCTT
CCTCCACTAGCA
mRNA sequenceShow/hide mRNA sequence
AGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGGTATTCATATTATCAATCTTACT
AGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGAAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGC
CCGGGCAGCAACAAGGGCTCGGTGTCATTATGTTAATAAAAAATGGCTGGGGGGGATGTTAACAAATTGGTCTACTACAGAAACGAGACTTCATAAGTTCAGGGACTTGA
GAACGGAACAAAAGACGGGGGGACTCAACCGTCTTCCGAAAAGGGATGCCGCTATGTTGAAGAGACAATTATCTCACTTGCAAACATATCTGGGCGTTGCCAGAGTACGC
TTAACCTCGGGATTTGAAATCACTGCTTATATACCTGGTATTGGCCATAATTTACAAGAACATTCTACAGTCTTAGTAAGAGGGGGAAGGGTTAAGGATTTACCCGGTGT
GAGATATCACATTGTTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCCAATACGTGGAGTAACTCTCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATTAACTC
ATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTTCGGGTCGAAATATGGCTTTCAAATTAAGT
TCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATATCTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAA
TGAGGCTACTACGAAATATTTACTCATGGGTGGGGCAATAGCTGCTTCAGCTTCAGCCACTCGAATTTTCGATATTCCTTTTTATTTCTCATCAAACGAATGGCATCTTC
TTCTGGAAATCCTAGCTATTCTTAGCATGATATTGGGGAATCTCATTGCTATTACTCAAACATGCATGAAACGTATGCTTGCGTATTCGTCCATCAGTCAAATCGGATAT
GTAATTATTGGAATAATTGTTGGAGACTTAAATGGTGGATATGCAAGCATGATAACTTACATGCTGTTCTATATCGCCATGAATCTAGGAACTTTTTCTCGCATTGTATC
ATTTGGTCTACGTACCGGAACTGATAACATTCGAGATTATGCAGGATTATACACAAAAGATCCTCATTGGGCTCTCTCTTTAGCCCTATGTCTCTTATCCTTAGGAGGTC
TTCCTCCACTAGCA
Protein sequenceShow/hide protein sequence
MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFLIVGTKNKAADSVARAATRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLR
TEQKTGGLNRLPKRDAAMLKRQLSHLQTYLGVARVRLTSGFEITAYIPGIGHNLQEHSTVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDPIRGVTLDIAVKARRVGGLTH
QVPIEIGSTQGKALAIRWLLGASRKRSGRNMAFKLSSELVDAAKGSGDAISPECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGAIAASASATRIFDIPFYFSSNEWHLL
LEILAILSMILGNLIAITQTCMKRMLAYSSISQIGYVIIGIIVGDLNGGYASMITYMLFYIAMNLGTFSRIVSFGLRTGTDNIRDYAGLYTKDPHWALSLALCLLSLGGL
PPLA