| GenBank top hits | e value | %identity | Alignment |
|---|
| APW82451.1 RNA polymerase beta'' subunit [Citrullus lanatus subsp. vulgaris] | 2.2e-112 | 96.26 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEHI
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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| APW82621.1 RNA polymerase beta'' subunit [Citrullus lanatus subsp. vulgaris] | 2.2e-112 | 96.26 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEHI
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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| YP_009420784.1 RNA polymerase beta'' subunit [Citrullus colocynthis] | 2.2e-112 | 96.26 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEHI
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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| YP_009431547.1 RNA polymerase beta'' subunit [Citrullus amarus] | 2.2e-112 | 96.26 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEHI
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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| YP_009431632.1 RNA polymerase beta'' subunit [Citrullus rehmii] | 2.2e-112 | 96.26 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEHI
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1P8LF52 DNA-directed RNA polymerase | 1.1e-112 | 96.26 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEHI
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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| A0A1P8LFL6 DNA-directed RNA polymerase | 1.1e-112 | 96.26 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEHI
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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| A0A249RX35 DNA-directed RNA polymerase subunit beta'' | 1.1e-112 | 96.26 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEHI
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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| A0A249RX89 DNA-directed RNA polymerase subunit beta'' | 1.1e-112 | 96.26 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEHI
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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| A0A343A8A0 DNA-directed RNA polymerase subunit beta'' | 1.1e-112 | 96.26 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEHI
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| B1A925 DNA-directed RNA polymerase subunit beta'' | 4.3e-111 | 92.06 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP NR +PERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGL+NRFITF+TQ ISIRTPFTCR+TSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEH+
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
R+PSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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| Q0ZJ30 DNA-directed RNA polymerase subunit beta'' | 1.2e-110 | 92.49 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP N MIPERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGL+NRFITFQ Q ISIRTPFTC++TSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEH+
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNED
RAPSNGKIKFNED
Subjt: RAPSNGKIKFNED
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| Q3C1G9 DNA-directed RNA polymerase subunit beta'' | 1.6e-110 | 91.59 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGT RGISVSP N M+PERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI RNQDIGIGL+NRFITF+ QPISIRTPFTCR+TSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEH+
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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| Q49L08 DNA-directed RNA polymerase subunit beta'' | 8.6e-112 | 92.06 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRG+SVSP N M+PERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI IRNQDIGIGL+NRFITF+TQPISIRTPFTCR+TSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEH+
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFN+DL
Subjt: RAPSNGKIKFNEDL
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| Q4VZP3 DNA-directed RNA polymerase subunit beta'' | 7.0e-114 | 94.86 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGI VSPGNRMIPERIFIQTLIG VLADD
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPGNRMIPERIFIQTLIGCVLADD
Query: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
IYMGPRCI +RNQDIGIGLINRFITFQTQPISIRTPFTCR+TSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAEHI
Subjt: IYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAEHI
Query: RAPSNGKIKFNEDL
RAPSNGKIKFNEDL
Subjt: RAPSNGKIKFNEDL
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G57660.1 nuclear RNA polymerase A1 | 2.8e-09 | 28.18 | Show/hide |
Query: EYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHI------VVRRTDCGTIR------GISVSPGN--RMIPERIFIQTLIGCVLADDIYMGPRCIVI
EY C R+G++DTAV+TS +GYL R L++ ++ + VR D I+ G+ V + E Q ++ ++D+ G +
Subjt: EYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHI------VVRRTDCGTIR------GISVSPGN--RMIPERIFIQTLIGCVLADDIYMGPRCIVI
Query: RNQDIGIGLINRFITF-QTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGG
D+ I L F + P++ R + +L +S L + GE VG++A QS+GE TQ+TL TF+ G
Subjt: RNQDIGIGLINRFITF-QTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGG
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| AT5G60040.1 nuclear RNA polymerase C1 | 6.3e-09 | 24.17 | Show/hide |
Query: LSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGIS----------------VSPGNRMIP---ERIFIQTLIGC------
L+ TE+ G R+G++DTAV+T+ GY++RRL++ ++ ++V + T+R S + G P R+F++ C
Subjt: LSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGIS----------------VSPGNRMIP---ERIFIQTLIGC------
Query: --VLADDIYMGPRCIVIRNQ------DIGIGLINRFITF-------QTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQ
+ ++++ ++R+ D + + F++ Q + + T + ++C R + +E G A+G I QSIGE GTQ
Subjt: --VLADDIYMGPRCIVIRNQ------DIGIGLINRFITF-------QTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQ
Query: LTLRTFNTGGV
+TL+TF+ GV
Subjt: LTLRTFNTGGV
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| ATCG00170.1 DNA-directed RNA polymerase family protein | 6.5e-107 | 88.43 | Show/hide |
Query: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP--GNRMIPERIFIQTLIGCVLA
MSDPQGQMIDLPIQSNLRE LSLTEYIISCYG RKGV+DTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP NRM+ ERIFIQTLIG VLA
Subjt: MSDPQGQMIDLPIQSNLREELSLTEYIISCYGERKGVMDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP--GNRMIPERIFIQTLIGCVLA
Query: DDIYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAE
DDIY+G RC+ RNQD+GIGL+NR ITF TQ ISIRTPFTCR+TSWICRLCYGRSPT GDLVELGEAVGIIAGQSIGE GTQLTLRTF+TGGVFTGGTAE
Subjt: DDIYMGPRCIVIRNQDIGIGLINRFITFQTQPISIRTPFTCRNTSWICRLCYGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGVFTGGTAE
Query: HIRAPSNGKIKFNEDL
H+RAP NGKIKFNEDL
Subjt: HIRAPSNGKIKFNEDL
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| ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core | 1.7e-46 | 61.73 | Show/hide |
Query: YGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGV---FTGGTAEHIRAPSNGKIKFNEDLRFLYEQYESEFEEGEGEGVLDPQQIEEDLFNH
YG DLV + + G +G S T+ F+ V F + + +G D RFLYE+YESEFEEGEGEGVLDPQQIEEDLFNH
Subjt: YGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGV---FTGGTAEHIRAPSNGKIKFNEDLRFLYEQYESEFEEGEGEGVLDPQQIEEDLFNH
Query: IVWAPRIWRPWGFLFDCIERPNELGFSYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQ
IVWAPRIWRP GFLFDCIERPNELGF Y A SFRGKRIIYDE+ ELQENDSEFLQSGT+QYQ
Subjt: IVWAPRIWRPWGFLFDCIERPNELGFSYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQ
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| ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core | 1.7e-46 | 61.73 | Show/hide |
Query: YGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGV---FTGGTAEHIRAPSNGKIKFNEDLRFLYEQYESEFEEGEGEGVLDPQQIEEDLFNH
YG DLV + + G +G S T+ F+ V F + + +G D RFLYE+YESEFEEGEGEGVLDPQQIEEDLFNH
Subjt: YGRSPTQGDLVELGEAVGIIAGQSIGESGTQLTLRTFNTGGV---FTGGTAEHIRAPSNGKIKFNEDLRFLYEQYESEFEEGEGEGVLDPQQIEEDLFNH
Query: IVWAPRIWRPWGFLFDCIERPNELGFSYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQ
IVWAPRIWRP GFLFDCIERPNELGF Y A SFRGKRIIYDE+ ELQENDSEFLQSGT+QYQ
Subjt: IVWAPRIWRPWGFLFDCIERPNELGFSYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQ
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