; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G178190 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G178190
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionGlycine-rich RNA-binding protein
Genome locationCicolChr09:25608004..25611404
RNA-Seq ExpressionCcUC09G178190
SyntenyCcUC09G178190
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136860.1 glycine-rich RNA-binding protein RZ1A [Cucumis sativus]3.6e-10396.68Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-GGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPY
        GRDHDRDRGRD GGARGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYS GGGGG GRYGPDRNGDR GGRNR SGDRGGSGSDRY RDRSGPY
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-GGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPY

Query:  ERRGSGGFRSG
        ERRGSGGFRSG
Subjt:  ERRGSGGFRSG

XP_008455237.1 PREDICTED: glycine-rich RNA-binding protein RZ1A [Cucumis melo]7.3e-10495.31Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY----SGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSG
        GRDHDRDRGRD GGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY     GGGGGSGRYGPDRNGDR GGRNR +GDRGGSGSDRY RDRSG
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY----SGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSG

Query:  PYERRGSGGFRSG
        PYERRGSGGFRSG
Subjt:  PYERRGSGGFRSG

XP_022154392.1 glycine-rich RNA-binding protein RZ1A [Momordica charantia]2.4e-9993.75Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPYER
        GRDHDRDR RD GG RGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGGGSGRYGPDRNGDR GGRNR SGDRGGSGSDR+ RDRSGPYER
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPYER

Query:  RGSGGFRS
        R SGGFRS
Subjt:  RGSGGFRS

XP_022988948.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita maxima]5.6e-9691.98Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG--GGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPY
        GRDHDRDR RD GG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG  GGGSGRYGPDRNGDRSGGRNR +GDRGGSGSDRY RDRSGPY
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG--GGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPY

Query:  ERR--GSGGFRS
        ERR  GSGGFRS
Subjt:  ERR--GSGGFRS

XP_038888155.1 glycine-rich RNA-binding protein RZ1A [Benincasa hispida]3.0e-10597.16Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS--GGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPY
        GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS  GGGGGSGRYGPDRNGDR GGRNR +GDRGGSGSDRY RDRSGPY
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS--GGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPY

Query:  ERRGSGGFRSG
        ERRGSGGFRSG
Subjt:  ERRGSGGFRSG

TrEMBL top hitse value%identityAlignment
A0A0A0K5W4 Uncharacterized protein1.8e-10396.68Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-GGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPY
        GRDHDRDRGRD GGARGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYS GGGGG GRYGPDRNGDR GGRNR SGDRGGSGSDRY RDRSGPY
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-GGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPY

Query:  ERRGSGGFRSG
        ERRGSGGFRSG
Subjt:  ERRGSGGFRSG

A0A1S3C164 glycine-rich RNA-binding protein RZ1A3.5e-10495.31Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY----SGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSG
        GRDHDRDRGRD GGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY     GGGGGSGRYGPDRNGDR GGRNR +GDRGGSGSDRY RDRSG
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY----SGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSG

Query:  PYERRGSGGFRSG
        PYERRGSGGFRSG
Subjt:  PYERRGSGGFRSG

A0A6J1DLZ2 glycine-rich RNA-binding protein RZ1A1.2e-9993.75Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPYER
        GRDHDRDR RD GG RGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGGGSGRYGPDRNGDR GGRNR SGDRGGSGSDR+ RDRSGPYER
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPYER

Query:  RGSGGFRS
        R SGGFRS
Subjt:  RGSGGFRS

A0A6J1EI50 glycine-rich RNA-binding protein RZ1A-like3.9e-9591.47Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS-GGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPYE
        GRD++RDR RD GG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGGGGSGRYGPDRNGDRSGGRNR +GDRGGSGSDRY RDRSGPYE
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS-GGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPYE

Query:  RR--GSGGFRS
        RR  GSGGFRS
Subjt:  RR--GSGGFRS

A0A6J1JNT9 glycine-rich RNA-binding protein RZ1A-like2.7e-9691.98Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG--GGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPY
        GRDHDRDR RD GG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG  GGGSGRYGPDRNGDRSGGRNR +GDRGGSGSDRY RDRSGPY
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG--GGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPY

Query:  ERR--GSGGFRS
        ERR  GSGGFRS
Subjt:  ERR--GSGGFRS

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A8.3e-2645.9Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG DLDGRSITV++AQ ++GSG         GG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSG
             GR  GG   S  G  +  G  G+        GGR G Y G    YS  GGG G YG    G R GG   G G  GG G
Subjt:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSG

Q03250 Glycine-rich RNA-binding protein 71.8e-2546.07Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ ++GSG         GG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGR---GGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYG
        H   RG   GG R    G     G  G +       GGR   GG Y G    YS  GGG G YG    G R GG   G G+ GG G    G
Subjt:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGR---GGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYG

Q03878 Glycine-rich RNA-binding protein1.8e-2546.11Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        EVEYRCF+GGL+W+T+D  L++AF +FG + ++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG +LDGR+ITV++AQ ++GSG         GG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG-GGGSGRYGPDRNGDRSGGRNRGSGDR
             GR  GG  G   G        G+  R    EGG GG YGGR +   GG GGG G YG  R G   G    G G R
Subjt:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG-GGGSGRYGPDRNGDRSGGRNRGSGDR

Q43472 Glycine-rich RNA-binding protein blt8017.0e-2546.59Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAD VEYRCF+GGL W+T D+ L+ AF K+G ++++K++ D+ +GRSRGFGFVTF   +AM +AI+AMNG DLDGR+ITV++AQ  +  G    G    G
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRN
        G  +   R    GG  G   G     G  G          G GG YG RD    G GGG G YG  R G  SGG N
Subjt:  GRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRN

Q9LIN3 Glycine-rich RNA-binding protein RZ1A1.1e-6257.37Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+++ EYRCFIGGL+W+TSDRGL++AFEK+GHLVEAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GGRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDKYSG
          R +DRDR R SGG  G   GDCFKCGKPGHFARECPSE  R G                                            RY  +DD+Y  
Subjt:  GGRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDKYSG

Query:  GGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPYERRGSGGF
          GG  RYGPDR+G+R+GGR+R  G RG  G +R+ R    PY+R  +GGF
Subjt:  GGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPYERRGSGGF

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 21.3e-2646.07Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ ++GSG         GG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGR---GGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYG
        H   RG   GG R    G     G  G +       GGR   GG Y G    YS  GGG G YG    G R GG   G G+ GG G    G
Subjt:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGR---GGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYG

AT2G21660.2 cold, circadian rhythm, and rna binding 21.7e-2646.2Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ ++GSG    G   RGG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGG
        +    GR  GG   S  G  +             S GG GG YGG   +  GGGG  G  G    G   GG
Subjt:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain7.9e-6457.37Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+++ EYRCFIGGL+W+TSDRGL++AFEK+GHLVEAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GGRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDKYSG
          R +DRDR R SGG  G   GDCFKCGKPGHFARECPSE  R G                                            RY  +DD+Y  
Subjt:  GGRDHDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDKYSG

Query:  GGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPYERRGSGGF
          GG  RYGPDR+G+R+GGR+R  G RG  G +R+ R    PY+R  +GGF
Subjt:  GGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPYERRGSGGF

AT4G39260.1 cold, circadian rhythm, and RNA binding 16.5e-2645.08Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        EVEYRCF+GGL+W+T+D  L+  F +FG ++++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG    G   RGG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSG
                SGG   S  G  +  G  G ++      GG GG Y  R   Y  GGGG GR      G   GGR  G G  GG G   YG    G
Subjt:  HDRDRGRDSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.1e-2543.07Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA +   R F+GGLS   +DR L+ AF +FG +++ ++++++ +GRSRGFGF+TF +++AMDE+I+ M+G D   R I+V++A+P  G   D +    RG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRD-RGRDSGGARGSNSG-----DCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYG-R
        GRD      G+ S G  G   G     +CFKCG+ GH+AR+CPS  GGRGG  GG   + S  GG  GR     + DR   R R   DR   G+ RYG R
Subjt:  GRDHDRD-RGRDSGGARGSNSG-----DCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYG-R

Query:  DR
        DR
Subjt:  DR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTCTCAAAGAGGCGTTTGAAAAGTTTGGCCATCTTGTCGAGGCCAA
GGTAGTTGTTGACAAATTTTCTGGACGCTCCCGTGGTTTTGGATTTGTCACTTTTGATGAGAAAAAAGCTATGGATGAGGCAATCAAAGCCATGAATGGAATGGATTTAG
ATGGCCGGAGCATTACAGTTGATAAGGCTCAACCAAACCAAGGTTCAGGTAGAGATCATGATGGTGACCGTCCACGTGGTGGTCGTGATCATGATCGTGATCGAGGTCGA
GATTCTGGTGGTGCACGTGGATCTAACAGTGGAGATTGCTTTAAATGCGGGAAACCTGGACATTTTGCTAGGGAATGTCCCAGTGAAGGTGGTAGAGGAGGTAGGTATGG
TGGTAGGGATGACAAATATAGTGGTGGTGGTGGCGGCAGTGGTCGATATGGTCCGGACCGAAATGGAGATAGATCTGGTGGGCGCAATAGGGGTAGTGGTGACCGAGGAG
GTTCGGGAAGTGATCGATATGGCCGTGACCGCTCTGGGCCGTATGAACGACGCGGTTCTGGTGGTTTTCGTTCTGGATAG
mRNA sequenceShow/hide mRNA sequence
GCAAAGGTCTTCGATTCGTTGACTAGCTCTTTGCCCTACAACCAGTTTAACCATCTCACCCTCACTTTGCCTTCTCCACCTTTTAGGTTCTCTCGCTACCGAATCCAATT
CCTAGGGCTTCCCTTCTTCATAAATTCTCTCATAATGGCTGACGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTCTCAAAGAGG
CGTTTGAAAAGTTTGGCCATCTTGTCGAGGCCAAGGTAGTTGTTGACAAATTTTCTGGACGCTCCCGTGGTTTTGGATTTGTCACTTTTGATGAGAAAAAAGCTATGGAT
GAGGCAATCAAAGCCATGAATGGAATGGATTTAGATGGCCGGAGCATTACAGTTGATAAGGCTCAACCAAACCAAGGTTCAGGTAGAGATCATGATGGTGACCGTCCACG
TGGTGGTCGTGATCATGATCGTGATCGAGGTCGAGATTCTGGTGGTGCACGTGGATCTAACAGTGGAGATTGCTTTAAATGCGGGAAACCTGGACATTTTGCTAGGGAAT
GTCCCAGTGAAGGTGGTAGAGGAGGTAGGTATGGTGGTAGGGATGACAAATATAGTGGTGGTGGTGGCGGCAGTGGTCGATATGGTCCGGACCGAAATGGAGATAGATCT
GGTGGGCGCAATAGGGGTAGTGGTGACCGAGGAGGTTCGGGAAGTGATCGATATGGCCGTGACCGCTCTGGGCCGTATGAACGACGCGGTTCTGGTGGTTTTCGTTCTGG
ATAGAATTGTGCCTTATCTTGTAGGTTTACATGGTGGGATCTTGCTGTTATGTCCTGCAGAATGTTAATGTTCCTTTCTACAGGTTGTCTCACGTACAGTTCAGAGTTCT
GAAGTGCAGAACTTGACGTTAATATTGAGATGTTTGTGTTCCTATGTGATGAATTTGGTATCTTGGTACAGTGGTGTGGTGTCTAATGTGTTCTTGACATATTCATTCGA
ATCTGGTTTTATGATGTTTGAGTGCCCTAGTAGCTGCTGCATTACTTGTGACACACATACACAGGGAATTTCAATAACTGCTGCACCATTTCATTTTGAAAATTTTCTTT
TAGAATACAACTAGACCTGGTTTTTGATGTTGGATGGGGTATTGAGAGGACCTTGCTTTTGATAAGCTGCAACTAGAGATCTGTGTCCAGACCTGGAAACTTTGAGGTGA
AATCCCCTTTTCAGAACGTTGTTCCCATTGTCTTATAAATTCCACAGGAGTTTACAGCATCCTTCCTTTTTATGGTCTTATTGGGTGCATAATACAGTTTCTTGTTAATT
GGGCGCTTTAAACTTAAAATTTACCAAAGCCTTTGGGATGCTCAAGCAATTTTGCAAATAAACTCACTTAATCTACAAATACGTCCTGCTGGCTTATGGTTGAGGGGTAT
TTCATGTGCTAAAATACCCAGCAAGTTGTTTGGAAGCTCTTGATGAGTTCTGCAACTGCTGCCCCATCTTTCCAACTTACGGTTATATTTCCGCTTTGTTCTTGTTGGGG
GAGACTTTTGATGTTCTTGCCTGTTCTGGATCTACTTGTTCTTCTTGGTTTTGTTTGCGGAGATTAATTCAGATGTGTGATTCTGTGCATCCAAGGTTTTCATTCAAAGT
TTGTCTGGAGTTTCTATAATGATCGTCCCTTTCACCTTCTGGATCAGTTTGGTTTCAAATCCATTGAAGCTTACTATTTCTATTGTTCTTTCTCTTCTCCAAATGCGATC
AAAGGAACCCGTCTCCTGTACATATGTATCTCAATTTTCATCCTTGTTTGCTGCCATGATGAATGTGTTTACAACAATAAATGTTTACCAAATATATTTTTGAACGTCTT
TGGCTTTTTTGTTTTTTTCTTGTTTTTGCATGATTTCTTTTCCATAGTTGTGTTCTTGTATCAATTGTCATCCTGGAAGGGATGGTTTTTCTATCTTCTATTTTTGTTTG
TGGCCCCAAACAGTTTTATTATGGAGAGCAAAATTGACTTGTTTGGCTTATTTAATGCCCCTCTCTCCCTCTATGACTTCAGTTTCTGTGTAAGATTTACATTGGTGCCA
TATTTGTTTGAGTGCTGAAATTGCAAAGCGTTTTGTTCAATGGTAGGCTTAGTTATTGTTACTTTGTTTAACTTCATCTATATATATATATAGATAGATAGATCAAGTAG
GAAAAAAAAAAACCTTGATCTTTTGTTGGATGAGGATTGTTGTCTTCCTTTTATTTGAGAATAAGCTGTGTATAGTTGTTTGATGGTTCCATTTTTAGGTTTTTATTATT
TAGAAATAAAGAGAAATTATAATTAACTTGTCATATAAGTGTTACTCTGAGAAATTGGCGATGGATAGGGAGTGAAAGAGACAAGAGTAGTTGTTGAACTTGAAATAGTG
TAGTTTAAAACAAATGTTTAAATCTTATTTTGCTCCTAGTGCAAAAAATAATGGCAAATCTGTCTCTTTTTAAATATTTCCACTTTTTTTTCTTTGAATTTTATCCTTTT
TCTTAACCATGCCTATTCACATCCAAACATTGTTATATTCCTTC
Protein sequenceShow/hide protein sequence
MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRDHDRDRGR
DSGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGSGRYGPDRNGDRSGGRNRGSGDRGGSGSDRYGRDRSGPYERRGSGGFRSG