; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G178500 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G178500
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionBromo domain-containing protein
Genome locationCicolChr09:26984876..26986473
RNA-Seq ExpressionCcUC09G178500
SyntenyCcUC09G178500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2613977.1 hypothetical protein D8674_036293 [Pyrus ussuriensis x Pyrus communis]2.4e-1447.42Show/hide
Query:  RQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALANILPEITRENAKYLAKLWKSTEYQK
        RQ    P+QVKSWK+I +  K+K FE  L+RFKVE H   VL QI RSYN++R  LK  W    +T  +A   + P +T E+ +YL  LW S E+QK
Subjt:  RQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALANILPEITRENAKYLAKLWKSTEYQK

ONI36261.1 hypothetical protein PRUPE_1G578800 [Prunus persica]3.2e-1443.09Show/hide
Query:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN
        +SST FKA+   L              RQ    P+QVKSWK+I    KKK FE  L+RFKVE H T VL QI RSY+N+R  LKK W    +T  +A   
Subjt:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN

Query:  ILPEITRENAKYLAKLWKSTEYQ
        + P +  ++ +YL  LW S E+Q
Subjt:  ILPEITRENAKYLAKLWKSTEYQ

XP_008218735.1 PREDICTED: uncharacterized protein LOC103319022 isoform X1 [Prunus mume]3.2e-1443.09Show/hide
Query:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN
        +SST FKA+   L              RQ    P+QVKSWK+I    KKK FE  L+RFKVE H T VL QI RSY+N+R  LKK W    +T  +A   
Subjt:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN

Query:  ILPEITRENAKYLAKLWKSTEYQ
        + P +  ++ +YL  LW S E+Q
Subjt:  ILPEITRENAKYLAKLWKSTEYQ

XP_009334129.1 PREDICTED: uncharacterized protein LOC103926967 [Pyrus x bretschneideri]2.4e-1447.42Show/hide
Query:  RQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALANILPEITRENAKYLAKLWKSTEYQK
        RQ    P+QVKSWK+I +  K+K FE  L+RFKVE H   VL QI RSYN++R  LK  W    +T  +A   + P +T E+ +YL  LW S E+QK
Subjt:  RQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALANILPEITRENAKYLAKLWKSTEYQK

XP_021824621.1 uncharacterized protein LOC110765722 [Prunus avium]3.2e-1443.09Show/hide
Query:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN
        +SST FKA+   L              RQ    P+QVKSWK+I    KKK FE  L+RFKVE H T VL QI RSY+N+R  LKK W    +T  +A   
Subjt:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN

Query:  ILPEITRENAKYLAKLWKSTEYQ
        + P +  ++ +YL  LW S E+Q
Subjt:  ILPEITRENAKYLAKLWKSTEYQ

TrEMBL top hitse value%identityAlignment
A0A5E4F8D3 PREDICTED: bromodomain-containing1.5e-1443.09Show/hide
Query:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN
        +SST FKA+   L              RQ    P+QVKSWK+I    KKK FE  L+RFKVE H T VL QI RSY+N+R  LKK W    +T  +A   
Subjt:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN

Query:  ILPEITRENAKYLAKLWKSTEYQ
        + P +  ++ +YL  LW S E+Q
Subjt:  ILPEITRENAKYLAKLWKSTEYQ

A0A5N5GFV1 Bromo domain-containing protein1.2e-1447.42Show/hide
Query:  RQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALANILPEITRENAKYLAKLWKSTEYQK
        RQ    P+QVKSWK+I +  K+K FE  L+RFKVE H   VL QI RSYN++R  LK  W    +T  +A   + P +T E+ +YL  LW S E+QK
Subjt:  RQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALANILPEITRENAKYLAKLWKSTEYQK

A0A6J5TUZ6 Bromo domain-containing protein1.5e-1443.09Show/hide
Query:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN
        +SST FKA+   L              RQ    P+QVKSWK+I    KKK FE  L+RFKVE H T VL QI RSY+N+R  LKK W    +T  +A   
Subjt:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN

Query:  ILPEITRENAKYLAKLWKSTEYQ
        + P +  ++ +YL  LW S E+Q
Subjt:  ILPEITRENAKYLAKLWKSTEYQ

A0A6J5TV49 Bromo domain-containing protein1.5e-1443.09Show/hide
Query:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN
        +SST FKA+   L              RQ    P+QVKSWK+I    KKK FE  L+RFKVE H T VL QI RSY+N+R  LKK W    +T  +A   
Subjt:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN

Query:  ILPEITRENAKYLAKLWKSTEYQ
        + P +  ++ +YL  LW S E+Q
Subjt:  ILPEITRENAKYLAKLWKSTEYQ

A0A6P5TBL4 uncharacterized protein LOC1107657221.5e-1443.09Show/hide
Query:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN
        +SST FKA+   L              RQ    P+QVKSWK+I    KKK FE  L+RFKVE H T VL QI RSY+N+R  LKK W    +T  +A   
Subjt:  QSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTTKKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALAN

Query:  ILPEITRENAKYLAKLWKSTEYQ
        + P +  ++ +YL  LW S E+Q
Subjt:  ILPEITRENAKYLAKLWKSTEYQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTGTCAAGAAAACGATGACGAAGAAGACAATACTTGCTTTTTCCATCAAGTTTACTATTTGTGTAAGGATGAAAAAAGTAAGAACTAGATTCAACAAC
AATGTTAGTATAGATAGTCACGAGAATACTATGATTGCATCTACATTTAATCAAATAATTGATGATCAACAATCTTCAACGAAATTTAAAGCAAAAAATCTTCTT
CTAAAGGAAGAAAAGCATGTGGTCCCACACGTAATCTTAAATGCTAGACAAATCAACTTTACTCCTGTACAAGTGAAAAGTTGGAAAGATATTGCTACAACAACA
AAAAAGAAACTATTTGAGCTTACATTGGAGCGATTTAAAGTTGAAGGTCACAAGACTTCAGTATTGCTTCAAATTCGCCGATCTTATAATAATTGGAGAGATAGT
TTAAAGAAAAAATGGTTGTACAAATATGATACAGTTGCAAAAGCTTTAGCAAATATTCTACCAGAAATTACAAGAGAAAATGCAAAATATCTTGCAAAGTTATGG
AAGTCAACTGAATATCAAAAAAGACTACAAATTGGGTTGAATGATGTTGGTCTGCTTCTTGCCCAATTATATTATGTAACACTCATTAACAGTCAAGAGTTGTGT
TGGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATTGTCAAGAAAACGATGACGAAGAAGACAATACTTGCTTTTTCCATCAAGTTTACTATTTGTGTAAGGATGAAAAAAGTAAGAACTAGATTCAACAAC
AATGTTAGTATAGATAGTCACGAGAATACTATGATTGCATCTACATTTAATCAAATAATTGATGATCAACAATCTTCAACGAAATTTAAAGCAAAAAATCTTCTT
CTAAAGGAAGAAAAGCATGTGGTCCCACACGTAATCTTAAATGCTAGACAAATCAACTTTACTCCTGTACAAGTGAAAAGTTGGAAAGATATTGCTACAACAACA
AAAAAGAAACTATTTGAGCTTACATTGGAGCGATTTAAAGTTGAAGGTCACAAGACTTCAGTATTGCTTCAAATTCGCCGATCTTATAATAATTGGAGAGATAGT
TTAAAGAAAAAATGGTTGTACAAATATGATACAGTTGCAAAAGCTTTAGCAAATATTCTACCAGAAATTACAAGAGAAAATGCAAAATATCTTGCAAAGTTATGG
AAGTCAACTGAATATCAAAAAAGACTACAAATTGGGTTGAATGATGTTGGTCTGCTTCTTGCCCAATTATATTATGTAACACTCATTAACAGTCAAGAGTTGTGT
TGGAGTTAA
Protein sequenceShow/hide protein sequence
MKIVKKTMTKKTILAFSIKFTICVRMKKVRTRFNNNVSIDSHENTMIASTFNQIIDDQQSSTKFKAKNLLLKEEKHVVPHVILNARQINFTPVQVKSWKDIATTT
KKKLFELTLERFKVEGHKTSVLLQIRRSYNNWRDSLKKKWLYKYDTVAKALANILPEITRENAKYLAKLWKSTEYQKRLQIGLNDVGLLLAQLYYVTLINSQELC
WS