; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G179760 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G179760
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptioncleavage and polyadenylation specificity factor subunit 3-II
Genome locationCicolChr09:30195761..30231051
RNA-Seq ExpressionCcUC09G179760
SyntenyCcUC09G179760
Gene Ontology termsGO:0010197 - polar nucleus fusion (biological process)
GO:0016180 - snRNA processing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001279 - Metallo-beta-lactamase
IPR011108 - Zn-dependent metallo-hydrolase, RNA specificity domain
IPR022712 - Beta-Casp domain
IPR036866 - Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
IPR041897 - Integrator complex subunit 11, MBL-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022944195.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Cucurbita moschata]0.0e+0091.67Show/hide
Query:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP
        M IDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMH+GY DH +YPDFSRIS SRDYNT LSCVIITHFHLDHIGAL YFTEVCGYNGPIYMTYPT+ALAP
Subjt:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP

Query:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI
        LMLEDYRKVMVDRRGEAEQF+NDHIMECMKKV+PVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDY+MTPDRHLGAAQIDRMQLDLLI
Subjt:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI

Query:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
        TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERM+LK+PIY+SAGLTVQANMYYKMLISWTSQKVKETY+TRNAFD
Subjt:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD

Query:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD
        FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQ+HQLAFSPHTDSKGIMD
Subjt:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD

Query:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-SCKAGVGGTSSLFIRKC
        LVKFLSPKHVILVHGEKPKM TLKERIHSELGIPCHDPANNETVSISSTLS+KAE+SSMFIQSCSTPNFKFLKRNLNDKI+S    +  GGTSS+F R+ 
Subjt:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-SCKAGVGGTSSLFIRKC

Query:  SGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSK
        S  H KHLNRNLD KFDSSLSCGPEL+VSDDRV EG+LVMENGKK KVVHQDELLL LGEQEHEVRFANC P+Y G+L +THVM+C+SRKS+WLSQL SK
Subjt:  SGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSK

Query:  LSSELSDRNVQN
        LSSELSDRNVQN
Subjt:  LSSELSDRNVQN

XP_022986472.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Cucurbita maxima]0.0e+0091.34Show/hide
Query:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP
        M IDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMH+GY DH +YPDFSRIS SRDYNT LSCVIITHFHLDHIGAL YFTEVCGYNGPIYMT+PTMALAP
Subjt:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP

Query:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI
        LMLEDYRKVMVDRRGEAEQF+NDHIMECMKKV+PVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDY+MTPDRHLGAAQIDRMQLDLLI
Subjt:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI

Query:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
        TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERM+LK+PIY+SAGLTVQANMYYKMLISWTSQKVKETY+TRNAFD
Subjt:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD

Query:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD
        FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQ+HQLAFSPHTDSKGIMD
Subjt:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD

Query:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-SCKAGVGGTSSLFIRKC
        LVKFLSPKHVILVHGEKPKM TLKERIHSELGIPCHDPANNETVSISSTLS+KAE+SS FIQSCSTPNFKFLKRNLNDKI+S    +  GGTSS+F R+ 
Subjt:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-SCKAGVGGTSSLFIRKC

Query:  SGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSK
        S  H KHLNRNLD KFDSSLSCGPEL+VSDDRV EG+LVME GKK KVVHQDELLL LGEQEHEVRFANC P+Y G+L +THVM+C+SRKS+WLSQL SK
Subjt:  SGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSK

Query:  LSSELSDRNVQN
        LSSELSDRNVQN
Subjt:  LSSELSDRNVQN

XP_023513382.1 cleavage and polyadenylation specificity factor subunit 3-II [Cucurbita pepo subsp. pepo]0.0e+0091.18Show/hide
Query:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP
        M IDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMH+GY DH +YPDFSRIS SRDYNT LSCVIITHFHLDHIGAL YFTEVCGYNGPIYMTYPT+ALAP
Subjt:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP

Query:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI
        LMLEDYRKVMVDRRGEAEQF+NDHIMECMKKV+PVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDY+MTPDRHLGAAQIDRMQLDLLI
Subjt:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI

Query:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
        TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERM+LK+PIY+SAGLTVQANMYYKMLISWTSQKVKETY+TRNAFD
Subjt:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD

Query:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD
        FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQ+HQLAFSPHTDSKGIMD
Subjt:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD

Query:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-SCKAGVGGTSSLFIRKC
        LVKFLSPKHVILVHGEKPKM TLKERIHSELGIPCHDPANNETVSISSTLS+KAE+SS FIQSCSTPNFKFLKRNLNDKI+S    +  GGTSS+FIR+ 
Subjt:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-SCKAGVGGTSSLFIRKC

Query:  SGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSK
        S  H KHLNRNLD KFDSSLSCGPE++VSDDRV EG+LVME GKK KVVHQDELLL LGEQEHEVRFANC P+Y G+L +THV+ C+SRKS+WLSQL SK
Subjt:  SGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSK

Query:  LSSELSDRNVQN
        LSSELSDRNVQN
Subjt:  LSSELSDRNVQN

XP_038901162.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Benincasa hispida]0.0e+0092.22Show/hide
Query:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP
        MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGY DHHQYPDFSRI  S DYNTALSC+IITHFHLDHIGAL YFTEVCGYNGPIYMTYPTMALAP
Subjt:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP

Query:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI
        LMLEDYRKV+VDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDY+MTPDRHLGAAQIDRMQLDLLI
Subjt:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI

Query:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
        TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELC+LLDDYWERM+LKVPIY SAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
Subjt:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD

Query:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD
        FKNVQKFDRSMIDAPGPC+LFATPGMISGGFSLEVFKRWAPSK NLITLPGYCVAGT+GHKLMSGKPTKIDLDKDTQIDVQCQ+HQLAFSPHTDSKGIMD
Subjt:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD

Query:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-----SCKAGVGGTSSLF
        LVKFLSPKHVILVHGEKPKMATLK+RIHSELGIPC+DPANNETVSISSTLSVKAEAS MFIQSCSTPNFKFLKRNLN+K+D      SCKA  GGTS +F
Subjt:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-----SCKAGVGGTSSLF

Query:  IRKCSGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQ
        IRKCS  HFK+LNRNLD KFDSS SCGPELQVSDDRV EG+LVME GKK KV+HQDE+LL LGEQEHEVRFANCRP+Y GNL ETHVM+CLSRKS+WLSQ
Subjt:  IRKCSGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQ

Query:  LFSKLSSELSDRNVQNL
        LFSKLSSELSD+NVQNL
Subjt:  LFSKLSSELSDRNVQNL

XP_038901171.1 cleavage and polyadenylation specificity factor subunit 3-II isoform X4 [Benincasa hispida]0.0e+0092.25Show/hide
Query:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP
        MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGY DHHQYPDFSRI  S DYNTALSC+IITHFHLDHIGAL YFTEVCGYNGPIYMTYPTMALAP
Subjt:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP

Query:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI
        LMLEDYRKV+VDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDY+MTPDRHLGAAQIDRMQLDLLI
Subjt:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI

Query:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
        TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELC+LLDDYWERM+LKVPIY SAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
Subjt:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD

Query:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD
        FKNVQKFDRSMIDAPGPC+LFATPGMISGGFSLEVFKRWAPSK NLITLPGYCVAGT+GHKLMSGKPTKIDLDKDTQIDVQCQ+HQLAFSPHTDSKGIMD
Subjt:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD

Query:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-----SCKAGVGGTSSLF
        LVKFLSPKHVILVHGEKPKMATLK+RIHSELGIPC+DPANNETVSISSTLSVKAEAS MFIQSCSTPNFKFLKRNLN+K+D      SCKA  GGTS +F
Subjt:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-----SCKAGVGGTSSLF

Query:  IRKCSGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQ
        IRKCS  HFK+LNRNLD KFDSS SCGPELQVSDDRV EG+LVME GKK KV+HQDE+LL LGEQEHEVRFANCRP+Y GNL ETHVM+CLSRKS+WLSQ
Subjt:  IRKCSGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQ

Query:  LFSKLSSELSDRNVQNLVG
        LFSKLSSELSD+NVQNLVG
Subjt:  LFSKLSSELSDRNVQNLVG

TrEMBL top hitse value%identityAlignment
A0A0A0LQW3 Uncharacterized protein0.0e+0089.54Show/hide
Query:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP
        MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGY DH +YPDFSRIS S DYN  LSC+IITHFHLDHIGAL YFTEVCGYNGPIYMTYPTMALAP
Subjt:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP

Query:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI
        + LEDYRKVMVDRRGEAEQFTNDHIMEC+KKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDY+MTPDRHLGAAQIDRMQLDLLI
Subjt:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI

Query:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
        TESTYATTIRDSKY REREFLKAVHNC+ASGGKVLIPTFALGRAQELC+LLDDYWERM+LK PIY SAGLTVQANMYYKMLISWTSQKVKETY+TRNAFD
Subjt:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD

Query:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD
        FKNVQKFDRSMIDAPGPCVLFATPGMIS GFSLEVFKRWAPSKLNLITLPGYCVAGT+GHKLMSGKPTKIDLDK TQIDVQCQVHQLAFSPHTDSKGIMD
Subjt:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD

Query:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDSSCKAGVGGTSSLFIRKCS
        LVKFLSPKHVILVHGEKPKMA LKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNL D            TS++ IR+CS
Subjt:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDSSCKAGVGGTSSLFIRKCS

Query:  GLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSKL
          HFKHL RNLDAKFDSSLSCGP LQVSDDRV EG+LVMENGKK K +HQDELLL LG+QEHEVRFA+CRP+Y G+L E HVM+ LSRKS+WLSQL  KL
Subjt:  GLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSKL

Query:  SSELSDRNVQNL
        S+ELSDRNVQNL
Subjt:  SSELSDRNVQNL

A0A1S3C9L2 cleavage and polyadenylation specificity factor subunit 3-II0.0e+0090.24Show/hide
Query:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP
        MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGY DH +YPDFSRIS SRDYN  LSC+IITHFHLDHIGAL YFTE+CGYNGPIYMTYPTMALAP
Subjt:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP

Query:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI
        + LEDYRKVMVDRRGEAEQFTNDHIMEC+KKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDY+MTPDRHLGAAQIDRMQLDLLI
Subjt:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI

Query:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
        TESTYATTIRDSKY REREFLKAVHNC+ASGGKVLIPTFALGRAQELC+LLDDYWERM+LK PIY SAGLTVQANMYYKMLISWTSQKVKETY+TRNAFD
Subjt:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD

Query:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD
        FKNVQKFDRSMIDAPGPCVLFATPGMIS GFSLEVFKRWAPSKLNLITLPGYCVAGT+GHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD
Subjt:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD

Query:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDSSCK---AGVGGTSSLFIR
        LVKFLSPKHVILVHGEKPKMA LKERIHSELGIPCHDPANNETVSISSTLS+KAEASSMFIQSCSTPNFKFLKRNL DKID   K        TS++ IR
Subjt:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDSSCK---AGVGGTSSLFIR

Query:  KCSGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLF
        +CS  HFKHLNRNLDAKFDSSLSCGPELQVSDDRV EG+LVMENGKK K +HQDELLL LGEQEHEVRFA+CRP+Y G+L E HVM+ LSRKS+WLSQL 
Subjt:  KCSGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLF

Query:  SKLSSELSDRNVQNL
         KLS+ELSDRNVQNL
Subjt:  SKLSSELSDRNVQNL

A0A6J1FYI7 cleavage and polyadenylation specificity factor subunit 3-II isoform X10.0e+0091.67Show/hide
Query:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP
        M IDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMH+GY DH +YPDFSRIS SRDYNT LSCVIITHFHLDHIGAL YFTEVCGYNGPIYMTYPT+ALAP
Subjt:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP

Query:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI
        LMLEDYRKVMVDRRGEAEQF+NDHIMECMKKV+PVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDY+MTPDRHLGAAQIDRMQLDLLI
Subjt:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI

Query:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
        TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERM+LK+PIY+SAGLTVQANMYYKMLISWTSQKVKETY+TRNAFD
Subjt:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD

Query:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD
        FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQ+HQLAFSPHTDSKGIMD
Subjt:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD

Query:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-SCKAGVGGTSSLFIRKC
        LVKFLSPKHVILVHGEKPKM TLKERIHSELGIPCHDPANNETVSISSTLS+KAE+SSMFIQSCSTPNFKFLKRNLNDKI+S    +  GGTSS+F R+ 
Subjt:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-SCKAGVGGTSSLFIRKC

Query:  SGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSK
        S  H KHLNRNLD KFDSSLSCGPEL+VSDDRV EG+LVMENGKK KVVHQDELLL LGEQEHEVRFANC P+Y G+L +THVM+C+SRKS+WLSQL SK
Subjt:  SGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSK

Query:  LSSELSDRNVQN
        LSSELSDRNVQN
Subjt:  LSSELSDRNVQN

A0A6J1J7M0 cleavage and polyadenylation specificity factor subunit 3-II isoform X10.0e+0091.34Show/hide
Query:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP
        M IDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMH+GY DH +YPDFSRIS SRDYNT LSCVIITHFHLDHIGAL YFTEVCGYNGPIYMT+PTMALAP
Subjt:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP

Query:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI
        LMLEDYRKVMVDRRGEAEQF+NDHIMECMKKV+PVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDY+MTPDRHLGAAQIDRMQLDLLI
Subjt:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI

Query:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
        TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERM+LK+PIY+SAGLTVQANMYYKMLISWTSQKVKETY+TRNAFD
Subjt:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD

Query:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD
        FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQ+HQLAFSPHTDSKGIMD
Subjt:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD

Query:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-SCKAGVGGTSSLFIRKC
        LVKFLSPKHVILVHGEKPKM TLKERIHSELGIPCHDPANNETVSISSTLS+KAE+SS FIQSCSTPNFKFLKRNLNDKI+S    +  GGTSS+F R+ 
Subjt:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDS-SCKAGVGGTSSLFIRKC

Query:  SGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSK
        S  H KHLNRNLD KFDSSLSCGPEL+VSDDRV EG+LVME GKK KVVHQDELLL LGEQEHEVRFANC P+Y G+L +THVM+C+SRKS+WLSQL SK
Subjt:  SGLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSK

Query:  LSSELSDRNVQN
        LSSELSDRNVQN
Subjt:  LSSELSDRNVQN

Q6E435 ACT11D09.90.0e+0089.13Show/hide
Query:  AGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYRKV
        AGQEVGKSCVVVTINGKRIMFDCGMHLGY DH +YPDFSRIS SRDYN  LSC+IITHFHLDHIGAL YFTE+CGYNGPIYMTYPTMALAP+ LEDYRKV
Subjt:  AGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYRKV

Query:  MVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYATTI
        MVDRRGEAEQFTNDHIMEC+KKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDY+MTPDRHLGAAQIDRMQLDLLITESTYATTI
Subjt:  MVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYATTI

Query:  RDSKYGREREFLKAVHNCVASGGKVLIPTFALGRA-QELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQKFD
        RDSKY REREFLKAVHNC+ASGGKVLIPTFALGRA QELC+LLDDYWERM+LK PIY SAGLTVQANMYYKMLISWTSQKVKETY+TRNAFDFKNVQKFD
Subjt:  RDSKYGREREFLKAVHNCVASGGKVLIPTFALGRA-QELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQKFD

Query:  RSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSPK
        RSMIDAPGPCVLFATPGMIS GFSLEVFKRWAPSKLNLITLPGYCVAGT+GHKLMSGKPTKIDLDKDTQID    VHQLAFSPHTDSKGIMDLVKFLSPK
Subjt:  RSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSPK

Query:  HVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDSSCK---AGVGGTSSLFIRKCSGLHFK
        HVILVHGEKPKMA LKERIHSELGIPCHDPANNETVSISSTLS+KAEASSMFIQSCSTPNFKFLKRNL DKID   K        TS++ IR+CS  HFK
Subjt:  HVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDSSCK---AGVGGTSSLFIRKCSGLHFK

Query:  HLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSKLSSELS
        HLNRNLDAKFDSSLS GPELQVSDDRV EG+LVMENGKK K +HQDELLL LGEQEHEVRFA+CRP+Y G+L E HVM+ LSRKS+WLSQL  KLS+ELS
Subjt:  HLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSKLSSELS

Query:  DRNVQNL
        DRNVQNL
Subjt:  DRNVQNL

SwissProt top hitse value%identityAlignment
Q3MHC2 Integrator complex subunit 117.3e-16358.88Show/hide
Query:  LGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYR
        LGAGQ+VG+SC++V+I+GK +M DCGMH+GY+D  ++PDFS I+ S      L CVII+HFHLDH GAL YF+E+ GY+GPIYMT+PT A+ P++LEDYR
Subjt:  LGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYR

Query:  KVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYAT
        K+ VD++GEA  FT+  I +CMKKVV V L QT+QVD++L+I+AYYAGHVLGAAMF  KVG  ++VYTGDY+MTPDRHLGAA ID+ + +LLITESTYAT
Subjt:  KVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYAT

Query:  TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQKF
        TIRDSK  RER+FLK VH  V  GGKVLIP FALGRAQELCILL+ +WERM+LKVPIY+S GLT +AN YYK+ I+WT+QK+++T+  RN F+FK+++ F
Subjt:  TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQKF

Query:  DRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSP
        DR+  D PGP V+FATPGM+  G SL++F++WA ++ N++ +PGYCV GT+GHK++SG+  K++++    ++V+ QV  ++FS H D+KGIM LV    P
Subjt:  DRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSP

Query:  KHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSV
        + V+LVHGE  KM  L+++I  E  + C+ PAN ETV++ ++ S+
Subjt:  KHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSV

Q54YL3 Integrator complex subunit 11 homolog6.6e-17257.14Show/hide
Query:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP
        M I  + LGAGQ+VG+SCV+VTI  K IMFDCGMH+G +D  ++PDFS IS +  +   + CVIITHFHLDH GAL +FTE+CGY+GPIYMT PT A+ P
Subjt:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP

Query:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI
        ++LEDYRK+ V+++GE   FT   I +CMKKV+PV+L QTI+VDE+L I+AYYAGHVLGAAMFYAKVGD ++VYTGDY+MTPDRHLG+A ID+++ D+LI
Subjt:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI

Query:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSL-KVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAF
        TE+TYATTIRDSK GRER+FLK +H CV  GGKVLIP FALGR QELCIL+D YWE+M+L  +PIY+SAGL  +AN+YYK+ I+WT+QK+K+T+  RN F
Subjt:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSL-KVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAF

Query:  DFKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMS--------GKPTK--IDLDKDTQIDVQCQVHQLAF
        DFK+++ F   ++DAPG  VLFATPGM+  G SLEVFK+WAP++LN+  +PGYCV GT+G+KL++         KP    +++DK T I+V+C++H L+F
Subjt:  DFKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMS--------GKPTK--IDLDKDTQIDVQCQVHQLAF

Query:  SPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEAS-SMFIQSCSTPNFKFLKRNLND
        S H D+KGI+ L+K  +P++VILVHGEK KM  L ++I  E+G+ C+ PAN  T+ I +  S+  + S ++  +     ++++   NLN+
Subjt:  SPHTDSKGIMDLVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEAS-SMFIQSCSTPNFKFLKRNLND

Q5ZIH0 Integrator complex subunit 113.6e-16258.22Show/hide
Query:  LGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYR
        LGAGQ+VG+SC++V+I GK +M DCGMH+GY+D  ++PDFS I+ +      L CVII+HFHLDH GAL YF+E+ GY+GPIYMT+PT A+ P++LEDYR
Subjt:  LGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYR

Query:  KVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYAT
        K+ VD++GE   FT+  I +CMKKVV V L QT+QVDE+L+I+AYYAGHVLGAAMF  KVG  ++VYTGDY+MTPDRHLGAA ID+ + DLLITESTYAT
Subjt:  KVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYAT

Query:  TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQKF
        TIRDSK  RER+FLK VH  V  GGKVLIP FALGRAQELCILL+ +WERM+LK PIY+S GLT +AN YYK+ I+WT+QK+++T+  RN F+FK+++ F
Subjt:  TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQKF

Query:  DRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSP
        DR+  D PGP V+FATPGM+  G SL++F++WA ++ N++ +PGYCV GT+GHK++SG+  K++++    ++V+ QV  ++FS H D+KGIM L++   P
Subjt:  DRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSP

Query:  KHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEAS
        ++V+LVHGE  KM  LK++I  E  + C+ PAN ET +I +  S+  + S
Subjt:  KHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEAS

Q8GUU3 Cleavage and polyadenylation specificity factor subunit 3-II8.7e-23364.92Show/hide
Query:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP
        MAIDCLVLGAGQE+GKSCVVVTINGK+IMFDCGMH+G  DH++YP+FS IS S D++ A+SC+IITHFH+DH+GAL YFTEVCGYNGPIYM+YPT AL+P
Subjt:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP

Query:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI
        LMLEDYR+VMVDRRGE E FT  HI  CMKKV+ +DLKQTIQVDEDLQIRAYYAGHVLGA M YAK+GDAA+VYTGDY+MT DRHLGAA+IDR+QLDLLI
Subjt:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI

Query:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
        +ESTYATTIR SKY REREFL+AVH CVA GGK LIP+FALGRAQELC+LLDDYWERM++KVPIY+S+GLT+QANMYYKMLISWTSQ VKE ++T N FD
Subjt:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD

Query:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD
        FKNV+ FDRS+I APGPCVLFATPGM+  GFSLEVFK WAPS LNL+ LPGY VAGT+GHKLM+GKPT +DL   T++DV+C+VHQ+AFSPHTD+KGIMD
Subjt:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD

Query:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDSSCKAGVGGTSSLFIRKCS
        L KFLSPK+V+LVHGEKP M  LKE+I SEL IPC  PAN ETVS +ST  +KA AS MF++SCS PNFKF                             
Subjt:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDSSCKAGVGGTSSLFIRKCS

Query:  GLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSKL
                           S   +L+V+D R  +GVLV+E  KK K+VHQDE+   L E+ H V  A+C PV V    E   ++ + + S  + +  S  
Subjt:  GLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSKL

Query:  SSELSDRNVQ
            S+  +Q
Subjt:  SSELSDRNVQ

Q9CWS4 Integrator complex subunit 117.3e-16358.88Show/hide
Query:  LGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYR
        LGAGQ+VG+SC++V+I+GK +M DCGMH+GY+D  ++PDFS I+ S      L CVII+HFHLDH GAL YF+E+ GY+GPIYMT+PT A+ P++LEDYR
Subjt:  LGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYR

Query:  KVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYAT
        K+ VD++GEA  FT+  I +CMKKVV V L QT+QVD++L+I+AYYAGHVLGAAMF  KVG  ++VYTGDY+MTPDRHLGAA ID+ + +LLITESTYAT
Subjt:  KVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYAT

Query:  TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQKF
        TIRDSK  RER+FLK VH  V  GGKVLIP FALGRAQELCILL+ +WERM+LKVPIY+S GLT +AN YYK+ I+WT+QK+++T+  RN F+FK+++ F
Subjt:  TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQKF

Query:  DRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSP
        DR+  D PGP V+FATPGM+  G SL++F++WA ++ N++ +PGYCV GT+GHK++SG+  K++++    ++V+ QV  ++FS H D+KGIM LV    P
Subjt:  DRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSP

Query:  KHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSV
        + V+LVHGE  KM  L+++I  E  + C+ PAN ETV++ ++ S+
Subjt:  KHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSV

Arabidopsis top hitse value%identityAlignment
AT1G61010.1 cleavage and polyadenylation specificity factor 73-I5.9e-8338.03Show/hide
Query:  LGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYR
        LGAG EVG+SCV ++  GK I+FDCG+H  Y      P F  I  S     ++  ++ITHFH+DH  +L YF E   +NG ++MT+ T A+  L+L DY 
Subjt:  LGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYR

Query:  KVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYAT
        KV      E   F    I + M K+  +D  QT++V+  ++   Y AGHVLGAAMF   +    ++YTGDYS   DRHL AA++ +   D+ I EST   
Subjt:  KVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYAT

Query:  TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMS--LKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQ
         +  S++ RE+ F   +H+ VA GG+VLIP FALGRAQEL ++LD+YW        +PIYY++ L  +    Y+  I   + +++  ++  N F FK++ 
Subjt:  TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMS--LKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQ

Query:  KFDR-SMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKF
          +     +  GP V+ ATPG +  G S ++F  W   K N   +PGY V GT+  K +  +P ++ L       +  QVH ++FS H D       +K 
Subjt:  KFDR-SMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKF

Query:  LSPKHVILVHGEKPKMATLKERIHSE
        L P ++ILVHGE  +M  LK+++ +E
Subjt:  LSPKHVILVHGEKPKMATLKERIHSE

AT1G61010.2 cleavage and polyadenylation specificity factor 73-I5.9e-8338.03Show/hide
Query:  LGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYR
        LGAG EVG+SCV ++  GK I+FDCG+H  Y      P F  I  S     ++  ++ITHFH+DH  +L YF E   +NG ++MT+ T A+  L+L DY 
Subjt:  LGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYR

Query:  KVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYAT
        KV      E   F    I + M K+  +D  QT++V+  ++   Y AGHVLGAAMF   +    ++YTGDYS   DRHL AA++ +   D+ I EST   
Subjt:  KVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYAT

Query:  TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMS--LKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQ
         +  S++ RE+ F   +H+ VA GG+VLIP FALGRAQEL ++LD+YW        +PIYY++ L  +    Y+  I   + +++  ++  N F FK++ 
Subjt:  TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMS--LKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQ

Query:  KFDR-SMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKF
          +     +  GP V+ ATPG +  G S ++F  W   K N   +PGY V GT+  K +  +P ++ L       +  QVH ++FS H D       +K 
Subjt:  KFDR-SMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKF

Query:  LSPKHVILVHGEKPKMATLKERIHSE
        L P ++ILVHGE  +M  LK+++ +E
Subjt:  LSPKHVILVHGEKPKMATLKERIHSE

AT1G61010.3 cleavage and polyadenylation specificity factor 73-I5.9e-8338.03Show/hide
Query:  LGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYR
        LGAG EVG+SCV ++  GK I+FDCG+H  Y      P F  I  S     ++  ++ITHFH+DH  +L YF E   +NG ++MT+ T A+  L+L DY 
Subjt:  LGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDYR

Query:  KVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYAT
        KV      E   F    I + M K+  +D  QT++V+  ++   Y AGHVLGAAMF   +    ++YTGDYS   DRHL AA++ +   D+ I EST   
Subjt:  KVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYAT

Query:  TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMS--LKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQ
         +  S++ RE+ F   +H+ VA GG+VLIP FALGRAQEL ++LD+YW        +PIYY++ L  +    Y+  I   + +++  ++  N F FK++ 
Subjt:  TIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMS--LKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQ

Query:  KFDR-SMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKF
          +     +  GP V+ ATPG +  G S ++F  W   K N   +PGY V GT+  K +  +P ++ L       +  QVH ++FS H D       +K 
Subjt:  KFDR-SMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKF

Query:  LSPKHVILVHGEKPKMATLKERIHSE
        L P ++ILVHGE  +M  LK+++ +E
Subjt:  LSPKHVILVHGEKPKMATLKERIHSE

AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II6.2e-23464.92Show/hide
Query:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP
        MAIDCLVLGAGQE+GKSCVVVTINGK+IMFDCGMH+G  DH++YP+FS IS S D++ A+SC+IITHFH+DH+GAL YFTEVCGYNGPIYM+YPT AL+P
Subjt:  MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAP

Query:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI
        LMLEDYR+VMVDRRGE E FT  HI  CMKKV+ +DLKQTIQVDEDLQIRAYYAGHVLGA M YAK+GDAA+VYTGDY+MT DRHLGAA+IDR+QLDLLI
Subjt:  LMLEDYRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLI

Query:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
        +ESTYATTIR SKY REREFL+AVH CVA GGK LIP+FALGRAQELC+LLDDYWERM++KVPIY+S+GLT+QANMYYKMLISWTSQ VKE ++T N FD
Subjt:  TESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD

Query:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD
        FKNV+ FDRS+I APGPCVLFATPGM+  GFSLEVFK WAPS LNL+ LPGY VAGT+GHKLM+GKPT +DL   T++DV+C+VHQ+AFSPHTD+KGIMD
Subjt:  FKNVQKFDRSMIDAPGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMD

Query:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDSSCKAGVGGTSSLFIRKCS
        L KFLSPK+V+LVHGEKP M  LKE+I SEL IPC  PAN ETVS +ST  +KA AS MF++SCS PNFKF                             
Subjt:  LVKFLSPKHVILVHGEKPKMATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDSSCKAGVGGTSSLFIRKCS

Query:  GLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSKL
                           S   +L+V+D R  +GVLV+E  KK K+VHQDE+   L E+ H V  A+C PV V    E   ++ + + S  + +  S  
Subjt:  GLHFKHLNRNLDAKFDSSLSCGPELQVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSKL

Query:  SSELSDRNVQ
            S+  +Q
Subjt:  SSELSDRNVQ

AT5G23880.1 cleavage and polyadenylation specificity factor 1001.7e-3427.55Show/hide
Query:  VVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDY---RKVMVDRRGE
        +V+I+G   + DCG +    D       SR++ + D       V+++H    HIGAL Y  +  G + P+Y T P   L  L + D    RK + D    
Subjt:  VVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLEDY---RKVMVDRRGE

Query:  AEQFTNDHIMECMKKVVPVDLKQTIQVD---EDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDR-MQLDLLITESTYAT-TIRD
         + FT D I    + V+ +   Q   +    E + I  + AGH+LG +++        ++Y  DY+   +RHL    +   ++  +LIT++ +A  T + 
Subjt:  AEQFTNDHIMECMKKVVPVDLKQTIQVD---EDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDR-MQLDLLITESTYAT-TIRD

Query:  SKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTR--NAFDFKNVQ-KFD
        ++  R++EFL  +   +  GG VL+P    GR  EL ++L+ +W +     PIY+   ++     Y K  + W S  + +++ T   NAF  ++V    +
Subjt:  SKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTR--NAFDFKNVQ-KFD

Query:  RSMID--APGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTK
        ++ +D   PGP V+ A+   +  GF+ E+F  WA    NL+        GT+   L S  P K
Subjt:  RSMID--APGPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCGATTGCCTCGTTCTTGGTGCTGGGCAAGAGGTTGGGAAGAGTTGTGTGGTCGTCACAATCAATGGAAAGCGAATTATGTTTGATTGTGGGATGCAT
TTAGGTTATCACGACCATCATCAGTATCCTGATTTTTCTCGCATATCTGATTCTCGTGATTATAATACTGCTCTCTCCTGTGTCATCATCACCCACTTTCACTTG
GACCATATAGGTGCTCTTGCATACTTCACCGAAGTTTGTGGCTATAATGGACCCATTTACATGACGTATCCAACAATGGCATTGGCTCCTTTAATGTTGGAGGAC
TATCGAAAAGTGATGGTTGATCGAAGGGGTGAAGCAGAGCAATTTACTAATGATCATATTATGGAGTGCATGAAAAAAGTTGTACCTGTGGATTTGAAGCAGACT
ATACAGGTTGATGAAGATCTTCAAATTCGTGCTTACTATGCTGGACATGTTTTAGGAGCTGCCATGTTTTATGCTAAAGTTGGAGATGCTGCTATGGTATACACA
GGAGACTATAGTATGACCCCTGATAGACATCTGGGAGCAGCTCAAATCGATCGAATGCAATTGGACCTTCTTATAACAGAGTCTACATATGCAACAACCATACGT
GATTCTAAATATGGCCGTGAGAGAGAATTTCTTAAAGCTGTTCATAATTGTGTGGCTAGTGGAGGGAAGGTCCTTATTCCTACTTTTGCACTTGGACGGGCTCAG
GAACTCTGTATCTTGTTGGATGACTATTGGGAGCGTATGAGTCTGAAGGTTCCGATATACTACTCAGCAGGTTTGACTGTTCAAGCTAATATGTACTATAAAATG
CTCATCAGTTGGACAAGCCAGAAGGTTAAAGAGACGTACTCTACAAGGAATGCATTTGACTTTAAGAATGTTCAAAAGTTCGACCGTTCTATGATTGATGCTCCT
GGACCTTGTGTTCTCTTTGCTACACCAGGGATGATCAGTGGTGGGTTTTCCCTTGAAGTTTTTAAGCGCTGGGCACCTTCTAAATTGAATCTGATCACATTACCT
GGGTATTGCGTGGCTGGAACTATTGGACACAAGTTAATGTCTGGCAAACCCACCAAAATTGATCTGGACAAGGACACCCAAATTGATGTGCAATGCCAGGTTCAC
CAACTGGCATTCAGTCCACATACTGATTCCAAAGGAATTATGGATCTTGTGAAGTTCCTTAGTCCCAAGCACGTGATACTTGTACATGGAGAGAAGCCTAAAATG
GCTACTTTAAAGGAGAGAATTCATTCTGAACTTGGAATCCCATGTCATGATCCTGCAAATAATGAAACCGTATCCATTTCTTCAACTCTTTCTGTCAAAGCAGAA
GCCTCAAGCATGTTTATTCAGAGTTGTTCAACTCCTAATTTCAAGTTTTTGAAAAGAAACTTGAATGATAAGATTGATTCAAGTTGCAAAGCAGGAGTAGGAGGA
ACTTCAAGCTTGTTTATACGCAAATGCTCGGGTCTCCATTTCAAGCATTTGAATAGAAATTTGGACGCCAAGTTTGATTCTAGTTTAAGTTGTGGTCCAGAGCTA
CAGGTAAGTGATGATAGAGTGAAAGAAGGAGTCTTGGTGATGGAAAATGGTAAAAAACCAAAGGTGGTACACCAGGATGAACTATTACTATTCTTGGGAGAACAA
GAGCACGAGGTTAGGTTTGCTAATTGTAGACCCGTATATGTTGGAAACTTAGGTGAGACCCATGTTATGAATTGCTTATCTAGAAAATCTGTATGGCTTTCCCAG
CTATTTTCAAAGCTTTCAAGTGAACTTTCAGACAGGAATGTTCAAAATCTCGTTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCGATTGCCTCGTTCTTGGTGCTGGGCAAGAGGTTGGGAAGAGTTGTGTGGTCGTCACAATCAATGGAAAGCGAATTATGTTTGATTGTGGGATGCAT
TTAGGTTATCACGACCATCATCAGTATCCTGATTTTTCTCGCATATCTGATTCTCGTGATTATAATACTGCTCTCTCCTGTGTCATCATCACCCACTTTCACTTG
GACCATATAGGTGCTCTTGCATACTTCACCGAAGTTTGTGGCTATAATGGACCCATTTACATGACGTATCCAACAATGGCATTGGCTCCTTTAATGTTGGAGGAC
TATCGAAAAGTGATGGTTGATCGAAGGGGTGAAGCAGAGCAATTTACTAATGATCATATTATGGAGTGCATGAAAAAAGTTGTACCTGTGGATTTGAAGCAGACT
ATACAGGTTGATGAAGATCTTCAAATTCGTGCTTACTATGCTGGACATGTTTTAGGAGCTGCCATGTTTTATGCTAAAGTTGGAGATGCTGCTATGGTATACACA
GGAGACTATAGTATGACCCCTGATAGACATCTGGGAGCAGCTCAAATCGATCGAATGCAATTGGACCTTCTTATAACAGAGTCTACATATGCAACAACCATACGT
GATTCTAAATATGGCCGTGAGAGAGAATTTCTTAAAGCTGTTCATAATTGTGTGGCTAGTGGAGGGAAGGTCCTTATTCCTACTTTTGCACTTGGACGGGCTCAG
GAACTCTGTATCTTGTTGGATGACTATTGGGAGCGTATGAGTCTGAAGGTTCCGATATACTACTCAGCAGGTTTGACTGTTCAAGCTAATATGTACTATAAAATG
CTCATCAGTTGGACAAGCCAGAAGGTTAAAGAGACGTACTCTACAAGGAATGCATTTGACTTTAAGAATGTTCAAAAGTTCGACCGTTCTATGATTGATGCTCCT
GGACCTTGTGTTCTCTTTGCTACACCAGGGATGATCAGTGGTGGGTTTTCCCTTGAAGTTTTTAAGCGCTGGGCACCTTCTAAATTGAATCTGATCACATTACCT
GGGTATTGCGTGGCTGGAACTATTGGACACAAGTTAATGTCTGGCAAACCCACCAAAATTGATCTGGACAAGGACACCCAAATTGATGTGCAATGCCAGGTTCAC
CAACTGGCATTCAGTCCACATACTGATTCCAAAGGAATTATGGATCTTGTGAAGTTCCTTAGTCCCAAGCACGTGATACTTGTACATGGAGAGAAGCCTAAAATG
GCTACTTTAAAGGAGAGAATTCATTCTGAACTTGGAATCCCATGTCATGATCCTGCAAATAATGAAACCGTATCCATTTCTTCAACTCTTTCTGTCAAAGCAGAA
GCCTCAAGCATGTTTATTCAGAGTTGTTCAACTCCTAATTTCAAGTTTTTGAAAAGAAACTTGAATGATAAGATTGATTCAAGTTGCAAAGCAGGAGTAGGAGGA
ACTTCAAGCTTGTTTATACGCAAATGCTCGGGTCTCCATTTCAAGCATTTGAATAGAAATTTGGACGCCAAGTTTGATTCTAGTTTAAGTTGTGGTCCAGAGCTA
CAGGTAAGTGATGATAGAGTGAAAGAAGGAGTCTTGGTGATGGAAAATGGTAAAAAACCAAAGGTGGTACACCAGGATGAACTATTACTATTCTTGGGAGAACAA
GAGCACGAGGTTAGGTTTGCTAATTGTAGACCCGTATATGTTGGAAACTTAGGTGAGACCCATGTTATGAATTGCTTATCTAGAAAATCTGTATGGCTTTCCCAG
CTATTTTCAAAGCTTTCAAGTGAACTTTCAGACAGGAATGTTCAAAATCTCGTTGGCTAG
Protein sequenceShow/hide protein sequence
MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYHDHHQYPDFSRISDSRDYNTALSCVIITHFHLDHIGALAYFTEVCGYNGPIYMTYPTMALAPLMLED
YRKVMVDRRGEAEQFTNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYSMTPDRHLGAAQIDRMQLDLLITESTYATTIR
DSKYGREREFLKAVHNCVASGGKVLIPTFALGRAQELCILLDDYWERMSLKVPIYYSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFDFKNVQKFDRSMIDAP
GPCVLFATPGMISGGFSLEVFKRWAPSKLNLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM
ATLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLNDKIDSSCKAGVGGTSSLFIRKCSGLHFKHLNRNLDAKFDSSLSCGPEL
QVSDDRVKEGVLVMENGKKPKVVHQDELLLFLGEQEHEVRFANCRPVYVGNLGETHVMNCLSRKSVWLSQLFSKLSSELSDRNVQNLVG