; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G181530 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G181530
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionmetalloendoproteinase 2-MMP-like
Genome locationCicolChr09:33087031..33090520
RNA-Seq ExpressionCcUC09G181530
SyntenyCcUC09G181530
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030198 - extracellular matrix organization (biological process)
GO:0030574 - collagen catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031012 - extracellular matrix (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001818 - Peptidase M10, metallopeptidase
IPR006026 - Peptidase, metallopeptidase
IPR021190 - Peptidase M10A
IPR024079 - Metallopeptidase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037438.1 metalloendoproteinase 1-like [Cucumis melo var. makuwa]2.2e-4582.24Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA
        Y+KADIKISFERGEH D+  FDGVGG+LAHAYPPTD RLHFDGDEAWSVGA++GYFDVETVALHEIGH+LGLQHS+I  AIMFPSI  GVTKGLH DDIA
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA

Query:  GVKALYQ
        G+K LY+
Subjt:  GVKALYQ

NP_001267680.1 metalloendoproteinase 1-like precursor [Cucumis sativus]1.4e-4481.31Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA
        Y+KADIKISFERGEH D+  FDGVGG+LAHAY PTD RLHFDGD+AWSVGA++GYFDVETVALHEIGH+LGLQHS+I  AIMFPSI  GVTKGLH DDIA
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA

Query:  GVKALYQ
        G+KALY+
Subjt:  GVKALYQ

XP_008458715.1 PREDICTED: metalloendoproteinase 1-like [Cucumis melo]2.2e-4582.24Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA
        Y+KADIKISFERGEH D+  FDGVGG+LAHAYPPTD RLHFDGDEAWSVGA++GYFDVETVALHEIGH+LGLQHS+I  AIMFPSI  GVTKGLH DDIA
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA

Query:  GVKALYQ
        G+K LY+
Subjt:  GVKALYQ

XP_022962668.1 metalloendoproteinase 2-MMP-like [Cucurbita moschata]1.6e-4382.24Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA
        + KADIKISFE G+H DD  FDGVGGILAHAY PTD RLHFDGDEAWSVGA+ GYFDVET+ALHEIGHVLGLQHSSI  AIMFPSIS GVTKGLH DDIA
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA

Query:  GVKALYQ
        G++ALY+
Subjt:  GVKALYQ

XP_038891016.1 metalloendoproteinase 2-MMP-like [Benincasa hispida]6.8e-4786.92Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA
        Y KADIKISFERGEH DD SFDGVGGILAHAYPPTD RLHFD DE WSVGA++GYFDVETVALHEIGH+LGLQHSSI  AIMFPSISAGVTKGLH DDIA
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA

Query:  GVKALYQ
        G+KALY+
Subjt:  GVKALYQ

TrEMBL top hitse value%identityAlignment
A0A1S3C814 metalloendoproteinase 1-like1.1e-4582.24Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA
        Y+KADIKISFERGEH D+  FDGVGG+LAHAYPPTD RLHFDGDEAWSVGA++GYFDVETVALHEIGH+LGLQHS+I  AIMFPSI  GVTKGLH DDIA
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA

Query:  GVKALYQ
        G+K LY+
Subjt:  GVKALYQ

A0A5D3BM88 Metalloendoproteinase 1-like1.1e-4582.24Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA
        Y+KADIKISFERGEH D+  FDGVGG+LAHAYPPTD RLHFDGDEAWSVGA++GYFDVETVALHEIGH+LGLQHS+I  AIMFPSI  GVTKGLH DDIA
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA

Query:  GVKALYQ
        G+K LY+
Subjt:  GVKALYQ

A0A6J1HFG1 metalloendoproteinase 2-MMP-like7.6e-4482.24Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA
        + KADIKISFE G+H DD  FDGVGGILAHAY PTD RLHFDGDEAWSVGA+ GYFDVET+ALHEIGHVLGLQHSSI  AIMFPSIS GVTKGLH DDIA
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA

Query:  GVKALYQ
        G++ALY+
Subjt:  GVKALYQ

A0A6J1JPK1 metalloendoproteinase 2-MMP-like7.6e-4482.24Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA
        + KADIKISFE G+H DD  FDG GGILAHAY PTD RLHFDGDEAWSVGA+ GYFDVETVALHEIGHVLGLQHSSI  AIMFPSIS GVTKGLH DDIA
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA

Query:  GVKALYQ
        G++ALY+
Subjt:  GVKALYQ

Q9LEL9 Matrix metalloproteinase6.8e-4581.31Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA
        Y+KADIKISFERGEH D+  FDGVGG+LAHAY PTD RLHFDGD+AWSVGA++GYFDVETVALHEIGH+LGLQHS+I  AIMFPSI  GVTKGLH DDIA
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIA

Query:  GVKALYQ
        G+KALY+
Subjt:  GVKALYQ

SwissProt top hitse value%identityAlignment
O04529 Metalloendoproteinase 2-MMP5.1e-2144.74Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG-------ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-
        +  +DI I F  G+H D   FDGV G LAHA+ P   + H D DE W V        ++T   D+E+VA+HEIGH+LGL HSS+  +IM+P+I+ G  K 
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG-------ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-

Query:  GLHEDDIAGVKALY
         L  DD+ G++ LY
Subjt:  GLHEDDIAGVKALY

P03956 Interstitial collagenase5.6e-2045.3Show/hide
Query:  KADIKISFERGEHRDDGSFDGVGGILAHAYPP---TDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDI
        +ADI ISF RG+HRD+  FDG GG LAHA+ P        HFD DE W+       +++  VA HE+GH LGL HS+  GA+M+PS +      L +DDI
Subjt:  KADIKISFERGEHRDDGSFDGVGGILAHAYPP---TDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDI

Query:  AGVKALY---QNKIQAL
         G++A+Y   QN +Q +
Subjt:  AGVKALY---QNKIQAL

P29136 Metalloendoproteinase 11.1e-2351.3Show/hide
Query:  THYKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAW------SVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK
        T Y+ A+IKI F    H D   FDG GGIL HA+ PTD R HFD DE W      +   +T  FD+E+VA+HEIGH+LGL HSS   AIM+PSI     K
Subjt:  THYKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAW------SVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK

Query:  -GLHEDDIAGVKALY
          L +DDI G++ LY
Subjt:  -GLHEDDIAGVKALY

Q8GWW6 Metalloendoproteinase 4-MMP6.6e-2147.75Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG----ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-GLH
        Y  ADIKI F  G+H D   FDGV G+LAH + P + RLH D  E W+V       +   D+E+VA+HEIGHVLGL HSS+  A M+P++     K  L+
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG----ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-GLH

Query:  EDDIAGVKALY
         DD+ GV++LY
Subjt:  EDDIAGVKALY

Q9ZUJ5 Metalloendoproteinase 5-MMP1.0e-2150Show/hide
Query:  KADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG---------ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-
        +ADI I F  GEH D   FDG  G LAHA  P    LH DGDE W +           +T   D+E+VA+HEIGH+LGL HSS+  AIMFP+IS G  K 
Subjt:  KADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG---------ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-

Query:  GLHEDDIAGVKALY
         L +DDI G++ LY
Subjt:  GLHEDDIAGVKALY

Arabidopsis top hitse value%identityAlignment
AT1G24140.1 Matrixin family protein8.9e-2144.35Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG--------ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK
        +  +DI I F  GEH D   FDG    LAHA+ P     H DG+E W V         +++   D+E+VA+HEIGH+LGL HSS+ G+IM+P+I  G  K
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG--------ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK

Query:  -GLHEDDIAGVKALY
          L  DD+ GV+ LY
Subjt:  -GLHEDDIAGVKALY

AT1G59970.1 Matrixin family protein7.3e-2350Show/hide
Query:  KADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG---------ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-
        +ADI I F  GEH D   FDG  G LAHA  P    LH DGDE W +           +T   D+E+VA+HEIGH+LGL HSS+  AIMFP+IS G  K 
Subjt:  KADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG---------ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-

Query:  GLHEDDIAGVKALY
         L +DDI G++ LY
Subjt:  GLHEDDIAGVKALY

AT1G70170.1 matrix metalloproteinase3.6e-2244.74Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG-------ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-
        +  +DI I F  G+H D   FDGV G LAHA+ P   + H D DE W V        ++T   D+E+VA+HEIGH+LGL HSS+  +IM+P+I+ G  K 
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG-------ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-

Query:  GLHEDDIAGVKALY
         L  DD+ G++ LY
Subjt:  GLHEDDIAGVKALY

AT2G45040.1 Matrixin family protein4.7e-2247.75Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG----ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-GLH
        Y  ADIKI F  G+H D   FDGV G+LAH + P + RLH D  E W+V       +   D+E+VA+HEIGHVLGL HSS+  A M+P++     K  L+
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVG----ALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-GLH

Query:  EDDIAGVKALY
         DD+ GV++LY
Subjt:  EDDIAGVKALY

AT4G16640.1 Matrixin family protein3.1e-2148.21Show/hide
Query:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSV-----GALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-GL
        +  AD+KI F  G+H D   FDGV G LAHA+ P + RLH D  E W V     G+     D+E+VA HEIGH+LGL HSS   A+M+PS+     K  L
Subjt:  YKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSV-----GALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTK-GL

Query:  HEDDIAGVKALY
          DD+AGV  LY
Subjt:  HEDDIAGVKALY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACATTATAAGAAAGCTGATATCAAAATAAGCTTCGAAAGAGGAGAGCATCGAGATGATGGTTCGTTTGATGGTGTGGGAGGAATTTTAGCGCATGCTTATCCACC
CACGGATGAGAGGCTTCACTTTGATGGCGATGAGGCTTGGTCTGTGGGTGCTCTTACAGGTTATTTTGATGTGGAAACTGTGGCGTTGCATGAGATTGGACATGTTCTTG
GGCTTCAACATAGCTCTATTCCAGGAGCGATTATGTTTCCAAGTATATCAGCTGGAGTTACCAAGGGTTTGCATGAGGATGATATTGCTGGAGTTAAGGCTCTATATCAA
AATAAAATTCAGGCCTTGTATTGTATCACCCAAACGACATCCGTGGAGATTCTTCTTAAGAAACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACATTATAAGAAAGCTGATATCAAAATAAGCTTCGAAAGAGGAGAGCATCGAGATGATGGTTCGTTTGATGGTGTGGGAGGAATTTTAGCGCATGCTTATCCACC
CACGGATGAGAGGCTTCACTTTGATGGCGATGAGGCTTGGTCTGTGGGTGCTCTTACAGGTTATTTTGATGTGGAAACTGTGGCGTTGCATGAGATTGGACATGTTCTTG
GGCTTCAACATAGCTCTATTCCAGGAGCGATTATGTTTCCAAGTATATCAGCTGGAGTTACCAAGGGTTTGCATGAGGATGATATTGCTGGAGTTAAGGCTCTATATCAA
AATAAAATTCAGGCCTTGTATTGTATCACCCAAACGACATCCGTGGAGATTCTTCTTAAGAAACATTAA
Protein sequenceShow/hide protein sequence
MTHYKKADIKISFERGEHRDDGSFDGVGGILAHAYPPTDERLHFDGDEAWSVGALTGYFDVETVALHEIGHVLGLQHSSIPGAIMFPSISAGVTKGLHEDDIAGVKALYQ
NKIQALYCITQTTSVEILLKKH