; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G181750 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G181750
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionNHL domain protein
Genome locationCicolChr09:33254502..33254957
RNA-Seq ExpressionCcUC09G181750
SyntenyCcUC09G181750
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037502.1 putative NHL domain-containing protein [Cucumis melo var. makuwa]5.7e-7488.36Show/hide
Query:  MSLAQSPDHSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDP
        MSLAQSPD SSDENGFH +DLHDA F + GCCFWIPCLRSN SQSWWERIRAADNDDEWWLRGWKRFREWSEI+AGPKWKTFIRQF+KNRNRQSTFRYDP
Subjt:  MSLAQSPDHSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDP

Query:  LSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKD
        LSYSLNFDEGPAH+D  +DDFVRRDFSTRFAA+P+SAKSSMDL KD
Subjt:  LSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKD

KAG6602448.1 hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sororia]1.1e-7283.55Show/hide
Query:  MSLAQSPDHSSDENGFHGDD-LHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYD
        MS++QSPD SSD NGFH DD LH+AAF SRGCCFW+PCLRSNPS+SWWERIRAADNDDEWWLRGWKRFR+WSEI+AGPKWKTFIRQF+KNR+RQST+RYD
Subjt:  MSLAQSPDHSSDENGFHGDD-LHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYD

Query:  PLSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI
        PLSY+LNFDEGPA DDP S+DF+RRDFS RFA++P+SAKSSMDL KDGPSFI
Subjt:  PLSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI

XP_016902318.1 PREDICTED: uncharacterized protein LOC107991628 [Cucumis melo]1.0e-7587.42Show/hide
Query:  MSLAQSPDHSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDP
        MSLAQSPD SSDENGFH +DLHDA F + GCCFWIPCLRSN SQSWWERIRAADNDDEWWLRGWKRFREWSEI+AGPKWKTFIRQF+KNRNRQSTFRYDP
Subjt:  MSLAQSPDHSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDP

Query:  LSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI
        LSYSLNFDEGPAH+D  +DDFVRRDFSTRFAA+P+SAKSSMDL KD PS I
Subjt:  LSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI

XP_031741765.1 uncharacterized protein LOC116403956 [Cucumis sativus]6.1e-7688.16Show/hide
Query:  MSLAQSPDHSSDENGF-HGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYD
        MSLA SPD SSDENGF H DDLHDA F +RGCC WIPCLRSN SQSWWERIRAADNDDEWWL+GWKRFREWSEI+AGPKWKTFIRQF+KNRNRQSTFRYD
Subjt:  MSLAQSPDHSSDENGF-HGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYD

Query:  PLSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI
        PLSYSLNFDEGPAHDDP +DDFVRRDFSTRFAA+P+SAKSSMDL KD PSFI
Subjt:  PLSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI

XP_038889212.1 uncharacterized protein LOC120079097 [Benincasa hispida]1.1e-8093.38Show/hide
Query:  MSLAQSPDHSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDP
        MSLAQSPD SSDEN FHGDDLHDAAFVSRGCC W+PCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDP
Subjt:  MSLAQSPDHSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDP

Query:  LSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI
        LSYSLNFDEGPAHDDP SDD VRRDFSTRFAA+P+SAKSSMDL KDGP FI
Subjt:  LSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI

TrEMBL top hitse value%identityAlignment
A0A0A0KRY7 Uncharacterized protein2.9e-7688.16Show/hide
Query:  MSLAQSPDHSSDENGF-HGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYD
        MSLA SPD SSDENGF H DDLHDA F +RGCC WIPCLRSN SQSWWERIRAADNDDEWWL+GWKRFREWSEI+AGPKWKTFIRQF+KNRNRQSTFRYD
Subjt:  MSLAQSPDHSSDENGF-HGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYD

Query:  PLSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI
        PLSYSLNFDEGPAHDDP +DDFVRRDFSTRFAA+P+SAKSSMDL KD PSFI
Subjt:  PLSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI

A0A1S4E267 uncharacterized protein LOC1079916285.0e-7687.42Show/hide
Query:  MSLAQSPDHSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDP
        MSLAQSPD SSDENGFH +DLHDA F + GCCFWIPCLRSN SQSWWERIRAADNDDEWWLRGWKRFREWSEI+AGPKWKTFIRQF+KNRNRQSTFRYDP
Subjt:  MSLAQSPDHSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDP

Query:  LSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI
        LSYSLNFDEGPAH+D  +DDFVRRDFSTRFAA+P+SAKSSMDL KD PS I
Subjt:  LSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI

A0A5A7T228 Putative NHL domain-containing protein2.8e-7488.36Show/hide
Query:  MSLAQSPDHSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDP
        MSLAQSPD SSDENGFH +DLHDA F + GCCFWIPCLRSN SQSWWERIRAADNDDEWWLRGWKRFREWSEI+AGPKWKTFIRQF+KNRNRQSTFRYDP
Subjt:  MSLAQSPDHSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDP

Query:  LSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKD
        LSYSLNFDEGPAH+D  +DDFVRRDFSTRFAA+P+SAKSSMDL KD
Subjt:  LSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKD

A0A6J1HFG4 uncharacterized protein LOC1114625578.9e-7383.55Show/hide
Query:  MSLAQSPDHSSDENGFHGDD-LHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYD
        MS+ QSPD SSD NGFH DD LH+AAF SRGCCFW+PCLRSNPS+SWWERIRAADNDDEWWLRGWKRFR+WSEI+AGPKWKTFIRQF+KNR+RQST+RYD
Subjt:  MSLAQSPDHSSDENGFHGDD-LHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYD

Query:  PLSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI
        PLSY+LNFDEGPA DDP S+DF+RRDFS RFA++P+SAKSSMDL KDGPSFI
Subjt:  PLSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI

A0A6J1JTQ3 uncharacterized protein LOC1114874229.8e-7281.58Show/hide
Query:  MSLAQSPDHSSDENGFHGDD-LHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYD
        MS++QSPD SSD NGFH DD LH+AAF SRGCCFW+PCLRSNPS++WWERIRAADNDDEWWLRGWKRFR+WSEI+AGPKWKTFIRQF+KNR+RQST+RYD
Subjt:  MSLAQSPDHSSDENGFHGDD-LHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYD

Query:  PLSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI
        PLSY+LNFD+GPA DDP  +DF+RRDFS RFA++P+SAKSSMDL KDGPSFI
Subjt:  PLSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)1.8e-3345.45Show/hide
Query:  DDLHDAAFVSRGCCFWIPCLRSNPSQS-----WWERIRAADN---DDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNR--------------------
        DD+H+A F  RGCCF +PCL S+   +     WW+RI   D    D+ WW+RGW+R REWSE++AGP+WKT+IR+F ++                     
Subjt:  DDLHDAAFVSRGCCFWIPCLRSNPSQS-----WWERIRAADN---DDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNR--------------------

Query:  --NR---QSTFRYDPLSYSLNFDEG--PAHDDPLSDDFVRRDFSTRFAA--LPSSAKSSMDLDKD
          NR   Q  FRYD LSYSLNFD+G    H D   D+F  RD+S RFAA  LP S K S+D D D
Subjt:  --NR---QSTFRYDPLSYSLNFDEG--PAHDDPLSDDFVRRDFSTRFAA--LPSSAKSSMDLDKD

AT3G48020.1 unknown protein1.3e-2041.53Show/hide
Query:  CLRSNPSQSWWERI-RAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNR------QSTFRYDPLSYSLNFDEGPAHDDPLSDDFVRRDFSTR
        C  +    SWW+RI R    +  WW+R + + REWSEI+AGP+WKTFIR+FN++  R         FRYDP+SY+L+F++    DD  +     R FS R
Subjt:  CLRSNPSQSWWERI-RAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNR------QSTFRYDPLSYSLNFDEGPAHDDPLSDDFVRRDFSTR

Query:  FAALP-SSAKSSMDLDKD
        +A++P +S KS   +  D
Subjt:  FAALP-SSAKSSMDLDKD

AT5G14890.1 NHL domain-containing protein2.8e-3449.33Show/hide
Query:  DDLHDAAFVSRGCCFWIPCLRSN----PSQS-WWERIRAADN---DDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNK------------NRNRQSTFRY
        D++H+A F  RGCCF +PCL S+    P+ S WW+RIR  D    D+ WW+ GW + REWSEI+AGPKWKTFIR+F +            NR    +FRY
Subjt:  DDLHDAAFVSRGCCFWIPCLRSN----PSQS-WWERIRAADN---DDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNK------------NRNRQSTFRY

Query:  DPLSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAA--LPSSAKSSMDLDKD
        D  SYSLNFD+G        D+F  RD+S RFAA  LP S K S+D D D
Subjt:  DPLSYSLNFDEGPAHDDPLSDDFVRRDFSTRFAA--LPSSAKSSMDLDKD

AT5G25240.1 unknown protein2.0e-0839.76Show/hide
Query:  SQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNR---NRQSTFRYDPLSYSLNFDEGPAHDDPLSDDFV
        S+  W      +    W     K  +E SE IAGPKWK FIR F+  R    R   F YD  +YSLNFD+G    D   + FV
Subjt:  SQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNR---NRQSTFRYDPLSYSLNFDEGPAHDDPLSDDFV

AT5G62865.1 unknown protein1.6e-2143.38Show/hide
Query:  DAAFVSRGCCFWIPCLRSNPSQ-----SWWERIRAAD---------NDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNR------QSTFRYDPLS
        D  +  R CCF  P  R + S      S W RIR  D         ++  WW+R   + REWSEI+AGP+WKTFIR+FN++  R         F+YDPLS
Subjt:  DAAFVSRGCCFWIPCLRSNPSQ-----SWWERIRAAD---------NDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNR------QSTFRYDPLS

Query:  YSLNFDEGPAHDDPLSDDFV----RRDFSTRFAALP
        YSLNFD     DD   D++V     R FSTRFA++P
Subjt:  YSLNFDEGPAHDDPLSDDFV----RRDFSTRFAALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTGGCGCAATCTCCCGACCACTCTTCCGACGAAAATGGCTTCCATGGCGATGACCTTCACGACGCCGCTTTCGTTAGCCGCGGCTGTTGCTTCTGGATCCCTTG
TCTGAGATCCAATCCCTCGCAGTCTTGGTGGGAGCGGATTAGGGCAGCCGATAACGACGATGAATGGTGGCTTAGAGGCTGGAAGAGGTTTCGCGAGTGGTCGGAAATCA
TCGCTGGCCCTAAATGGAAGACTTTCATTCGTCAATTCAATAAGAATCGCAATCGTCAATCCACTTTCCGTTACGATCCTCTAAGTTACTCTCTTAATTTCGACGAAGGT
CCAGCCCACGACGATCCTCTCAGCGACGATTTTGTACGCCGTGATTTCTCCACTCGATTCGCCGCCCTTCCGTCCTCCGCCAAATCGTCTATGGACCTCGATAAGGACGG
TCCGTCCTTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTGGCGCAATCTCCCGACCACTCTTCCGACGAAAATGGCTTCCATGGCGATGACCTTCACGACGCCGCTTTCGTTAGCCGCGGCTGTTGCTTCTGGATCCCTTG
TCTGAGATCCAATCCCTCGCAGTCTTGGTGGGAGCGGATTAGGGCAGCCGATAACGACGATGAATGGTGGCTTAGAGGCTGGAAGAGGTTTCGCGAGTGGTCGGAAATCA
TCGCTGGCCCTAAATGGAAGACTTTCATTCGTCAATTCAATAAGAATCGCAATCGTCAATCCACTTTCCGTTACGATCCTCTAAGTTACTCTCTTAATTTCGACGAAGGT
CCAGCCCACGACGATCCTCTCAGCGACGATTTTGTACGCCGTGATTTCTCCACTCGATTCGCCGCCCTTCCGTCCTCCGCCAAATCGTCTATGGACCTCGATAAGGACGG
TCCGTCCTTCATTTGA
Protein sequenceShow/hide protein sequence
MSLAQSPDHSSDENGFHGDDLHDAAFVSRGCCFWIPCLRSNPSQSWWERIRAADNDDEWWLRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDPLSYSLNFDEG
PAHDDPLSDDFVRRDFSTRFAALPSSAKSSMDLDKDGPSFI