; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G181850 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G181850
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRNA exonuclease 4
Genome locationCicolChr09:33350442..33354228
RNA-Seq ExpressionCcUC09G181850
SyntenyCcUC09G181850
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602442.1 hypothetical protein SDJN03_07675, partial [Cucurbita argyrosperma subsp. sororia]6.2e-12872.06Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK
        MR+SFHS HEPTCSLCHKHCRSFESLREHLIGP PKQ+CNNIF  RGCKICLAIFESP  LR H ERCQLR  NS +I   F N G  DKL T +NG  +
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK

Query:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRD-AMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR
        R+  EAVAL+C MVG GSDGSL  CARVCLI +NE++IFSTYV PTLP+TNYR ESTGV PEY+RD AMPLKQVQKKIQ+ LCNGEPMWKIRPG  GKAR
Subjt:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRD-AMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR

Query:  ILVGHGVEEDLTRLHIDYPNFMI--------------RYNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVWKQFELEKMSPQQM
        ILVGHG+ + L  L I+YP FMI              RY+++NG K+ YE+CVATMRLYMRM+SQVHK E+YPLASDPQNK+NFA+WKQFELE+MSP+QM
Subjt:  ILVGHGVEEDLTRLHIDYPNFMI--------------RYNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVWKQFELEKMSPQQM

Query:  LQISRSDYYCWCLDS
        L++SRSDYYCWCLDS
Subjt:  LQISRSDYYCWCLDS

XP_011656271.2 RNA exonuclease 4 [Cucumis sativus]1.4e-12771.12Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVN-SREIMGRFGNLGNGDKLMTMENGST
        MRISFHS HEP CS CHKH R FESLREHLIGPLPKQ+C NIFN RGCKICLA+FESPL+L  H E CQLRP+N S E   R G           E+G T
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVN-SREIMGRFGNLGNGDKLMTMENGST

Query:  KRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR
        K   NEAVALSCTMVGAG DGSL+ C RVC++ QNESLIFSTYV PTLP+TNYR+E TGVRPE+LRDAMPLKQVQKKIQEFLCNGE MWKIRPG+TG+AR
Subjt:  KRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR

Query:  ILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKK-EGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAV
        ILVGHG++E LT L IDYP  MIR                           Y+MENGK+ EGYEECVATMRLYMRMKSQVHKRE+YPLASDPQNK NFA 
Subjt:  ILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKK-EGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAV

Query:  WKQFELEKMSPQQMLQISRSDYYCWCLDS
        WKQ ELEKM+PQQ+LQISRSDYYCWCLDS
Subjt:  WKQFELEKMSPQQMLQISRSDYYCWCLDS

XP_022961916.1 RNA exonuclease 4-like [Cucurbita moschata]1.8e-12769.21Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK
        MR+SFHS HEPTCSLCHKHCRSFESLREHLIGP PKQ+CNN+F  RGCKICLAIFESP  LR H ERCQLR  NS +I  RF N+G  DKL T +NG  +
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK

Query:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRD-AMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR
        R+  EAVAL+C MVG GSDGSL  CARVCLI +NE++IFSTYV PTLP+TNYR ESTGV PEY+RD AMPLKQVQKKIQ+ LCNGEPMWKIRPG  GKAR
Subjt:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRD-AMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR

Query:  ILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVW
        ILVGHG+ + L  L I+YP FMIR                           Y+++NG K+ YE+CVATMRLYMRM+SQVHK E+YPLASDPQNK+NFA+W
Subjt:  ILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVW

Query:  KQFELEKMSPQQMLQISRSDYYCWCLDS
        KQFELE+MSP+QML++SRSDYYCWCLDS
Subjt:  KQFELEKMSPQQMLQISRSDYYCWCLDS

XP_022990586.1 RNA exonuclease 4-like [Cucurbita maxima]7.3e-12970.12Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK
        MR+SFHS HEPTCSLCHKHCRSFESLREHLIGPLPKQ+CNNIF TRGCKICLAIFESP  LR H ERCQLR  N  +IM RF N+G  DKL T +NG  +
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK

Query:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRD-AMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR
        R+  EAVAL+C MVG GSDGSL  CARVCLI + E++IFSTYV PTLP+TNYR ESTGV PEYLRD AMPLKQVQKKIQ+ LCNGEPMWKIRPG  GKAR
Subjt:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRD-AMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR

Query:  ILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVW
        ILVGHG+ + L  L I+YP FMIR                           Y+++NG K+ YE+CVATMRLYMRM++QVHK E+YPLASDPQNK+NFA+W
Subjt:  ILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVW

Query:  KQFELEKMSPQQMLQISRSDYYCWCLDS
        KQFELE+MSP+QML+ISRSDYYCWCLDS
Subjt:  KQFELEKMSPQQMLQISRSDYYCWCLDS

XP_023543310.1 RNA exonuclease 4-like [Cucurbita pepo subsp. pepo]1.4e-12769.21Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK
        MR+SFHS HEPTCSLCHKHCRSFESLREHLIGPLPKQ+CNNIF TRGCKICLAIFESP  LR H ERCQLR  NS + M RF N+G  DKL T +NG  +
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK

Query:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRD-AMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR
        R+  EAVAL+C MVG GSDGSL  CARVCLI +NE++IFSTYV PTLP+TNYR ESTGV PEY+RD AMPLKQV KKI++ LCNGEPMWKIRPG  GKAR
Subjt:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRD-AMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR

Query:  ILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVW
        ILVGHG+ + L  L I+YP FMIR                           Y+++N  K+ YE+CVATMRLYMRM+SQVHK E+YPLASDPQNK+NFA+W
Subjt:  ILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVW

Query:  KQFELEKMSPQQMLQISRSDYYCWCLDS
        KQFELE+MSP+QML++SRSDYYCWCLDS
Subjt:  KQFELEKMSPQQMLQISRSDYYCWCLDS

TrEMBL top hitse value%identityAlignment
A0A1S3C947 RNA exonuclease 41.8e-12065.55Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK
        MR SFHS HEPTC++C KHCRS +SLREHLIGPLPKQ+C NIF TRGCK CLAI +S    R H ERCQ  PVNS  ++ RF NLG  D    +++G T+
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK

Query:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARI
           + A+AL+C  VG GSDGSL  CA+VCL+ + E++IF +YV+P +PVTNYR+E TGVRPE+LRDAMPLKQVQKKIQEFLCNGE MWKIRPG+T KARI
Subjt:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARI

Query:  LVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKK-EGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVW
        LVGHG++E LT L IDYP+ MIR                           YNMENGKK EGYEECVATMRLY++MKSQVHKRE+YPLASDP NK NFA+W
Subjt:  LVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKK-EGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVW

Query:  KQFELEKMSPQQMLQISRSDYYCWCLDS
        KQ ELEKM+PQQ+LQISRSDYYCWCLD+
Subjt:  KQFELEKMSPQQMLQISRSDYYCWCLDS

A0A5D3BS62 RNA exonuclease 48.4e-12370.43Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK
        MR SFHS HEPTC++C KHCRS +SLREHLIGPLPKQ+C NIF TRGCK CLAI +S    R H ERCQ  P     ++ RF NLG  D    +++G T+
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK

Query:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARI
           + A+AL+C  VG GSDGSL  CA+VCL+ + E++IF +YV+P +PVTNYR+E TGVRPE+LRDAMPLKQVQKKIQEFLCNGE MWKIRPG+T KARI
Subjt:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARI

Query:  LVGHGVEEDLTRLHIDYPNFMIRYNMENGKK-EGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVWKQFELEKMSPQQMLQISRSDYYCWCLD
        LVGHG++E LT L IDYP+ MIRYNMENGKK EGYEECVATMRLY++MKSQVHKRE+YPLASDP NK NFA+WKQ ELEKM+PQQ+LQISRSDYYCWCLD
Subjt:  LVGHGVEEDLTRLHIDYPNFMIRYNMENGKK-EGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVWKQFELEKMSPQQMLQISRSDYYCWCLD

Query:  S
        +
Subjt:  S

A0A6J1HBP2 RNA exonuclease 48.7e-12869.21Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK
        MR+SFHS HEPTCSLCHKHCRSFESLREHLIGP PKQ+CNN+F  RGCKICLAIFESP  LR H ERCQLR  NS +I  RF N+G  DKL T +NG  +
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK

Query:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRD-AMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR
        R+  EAVAL+C MVG GSDGSL  CARVCLI +NE++IFSTYV PTLP+TNYR ESTGV PEY+RD AMPLKQVQKKIQ+ LCNGEPMWKIRPG  GKAR
Subjt:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRD-AMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR

Query:  ILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVW
        ILVGHG+ + L  L I+YP FMIR                           Y+++NG K+ YE+CVATMRLYMRM+SQVHK E+YPLASDPQNK+NFA+W
Subjt:  ILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVW

Query:  KQFELEKMSPQQMLQISRSDYYCWCLDS
        KQFELE+MSP+QML++SRSDYYCWCLDS
Subjt:  KQFELEKMSPQQMLQISRSDYYCWCLDS

A0A6J1JNC8 RNA exonuclease 43.5e-12970.12Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK
        MR+SFHS HEPTCSLCHKHCRSFESLREHLIGPLPKQ+CNNIF TRGCKICLAIFESP  LR H ERCQLR  N  +IM RF N+G  DKL T +NG  +
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK

Query:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRD-AMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR
        R+  EAVAL+C MVG GSDGSL  CARVCLI + E++IFSTYV PTLP+TNYR ESTGV PEYLRD AMPLKQVQKKIQ+ LCNGEPMWKIRPG  GKAR
Subjt:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRD-AMPLKQVQKKIQEFLCNGEPMWKIRPGATGKAR

Query:  ILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVW
        ILVGHG+ + L  L I+YP FMIR                           Y+++NG K+ YE+CVATMRLYMRM++QVHK E+YPLASDPQNK+NFA+W
Subjt:  ILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVW

Query:  KQFELEKMSPQQMLQISRSDYYCWCLDS
        KQFELE+MSP+QML+ISRSDYYCWCLDS
Subjt:  KQFELEKMSPQQMLQISRSDYYCWCLDS

W9S0J7 RNA exonuclease 43.1e-11761.21Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK
        MR S+HS HEP C +C KHCRSFESLREHLIGPLPKQ+C NIF+TRGC+ CLAIF+SP  LR H +RCQL  +N   ++GR  NLG  D L    +G + 
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK

Query:  R--YENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKA
        R     + VAL+C MVG GSDGSL  CARVCLI + E++IF +YV+P +PVTNYR+E+TG+RPEYLRDAMP++QVQKKIQ+FLCNGEPMWKIRP + GKA
Subjt:  R--YENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKA

Query:  RILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAV
        RILVGHG++ DL RL ++YP+ MIR                           Y++++G ++ YE+CVATMRLYMRM+SQ H+ EDYPLASDPQN++NFA 
Subjt:  RILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAV

Query:  WKQFELEKMSPQQMLQISRSDYYCWCLDSN
        W+Q ELE+M+P+QML+ISRSDYYCWCLDSN
Subjt:  WKQFELEKMSPQQMLQISRSDYYCWCLDSN

SwissProt top hitse value%identityAlignment
Q6CMT3 RNA exonuclease 43.4e-1232.48Show/hide
Query:  VALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHGV
        V++ C  VG G DG     ARV +++   +++   +V+P  PVT++R   +G++P ++ +A+  +  QK++   L               K RILVGH V
Subjt:  VALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHGV

Query:  EEDLTRLHIDYPNFMIR
          DLT L + +P  MIR
Subjt:  EEDLTRLHIDYPNFMIR

Q6DEW6 RNA exonuclease 46.8e-1331.91Show/hide
Query:  VALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHGV
        VA+ C MVG G DG     ARV +++     ++  YV+PT  VT+YR   +G+RP+ +++    K VQ ++ E L               + R LVGH V
Subjt:  VALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHGV

Query:  EEDLTRLHIDYPNFMIRYNMENGKKEGYEECVATMRLYMRM
          DL  L +D+P   IR   +  K + ++E V + R  +++
Subjt:  EEDLTRLHIDYPNFMIRYNMENGKKEGYEECVATMRLYMRM

Q6PAQ4 RNA exonuclease 41.5e-1534.53Show/hide
Query:  LGNGDKLMTMENGSTKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNG
        LG   + +++E         +A+AL C MVG G  G     ARV +++Q    ++  YV+PT PVT+YR   +G+RPE L+     + V+K++ E L   
Subjt:  LGNGDKLMTMENGSTKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNG

Query:  EPMWKIRPGATGKARILVGHGVEEDLTRLHIDYPNFMIR
                    K RILVGH +  DL  L +D+P   IR
Subjt:  EPMWKIRPGATGKARILVGHGVEEDLTRLHIDYPNFMIR

Q91560 RNA exonuclease 42.8e-1437.61Show/hide
Query:  VALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHGV
        VA+ C MVG G DG     ARV +++     ++  YV+PT  VT+YR   +G+RPE ++   P K VQK++ E L               + R LVGH V
Subjt:  VALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHGV

Query:  EEDLTRLHIDYPNFMIR
          DL  L +D+P   IR
Subjt:  EEDLTRLHIDYPNFMIR

Q9GZR2 RNA exonuclease 42.3e-1635.86Show/hide
Query:  AVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHG
        A+AL C MVG G  G     ARV +++Q    ++  YV+PT PVT+YR   +G+RPE L+    L+ VQK++ E L               K RILVGH 
Subjt:  AVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHG

Query:  VEEDLTRLHIDYPNFMIRYNMENGKKEGYEECVATMRLYMRMKSQ
        +  DL  L +D+P   IR   +  K + ++  V + R  +R+ S+
Subjt:  VEEDLTRLHIDYPNFMIRYNMENGKKEGYEECVATMRLYMRMKSQ

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein1.8e-6139.34Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGP--LPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGS
        M+IS+HS H+P C +C KHC+SFES+REHL  P  L K +C  IF  RGC +CL IFE    L  H  +C L P               G       + S
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGP--LPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGS

Query:  TKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKA
              +A+AL C MVG G+DG++  CA VCL+  +E++IFST+VQP LPVT+YR E TG+  E L+D MPL+ V++++  FLC G+       GA G+ 
Subjt:  TKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKA

Query:  RILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAV
         +LVGH +  D++ L ++YP+ ++R                           Y ++ GK E YE+CV+ MRLY RM+ Q H      + S     +    
Subjt:  RILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAV

Query:  WKQFELEKMSPQQMLQISRSDYYCWCLD--SNP
         KQ +LEKM+ +++ Q S S+Y CWCLD  SNP
Subjt:  WKQFELEKMSPQQMLQISRSDYYCWCLD--SNP

AT2G48100.2 Exonuclease family protein1.8e-6139.34Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGP--LPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGS
        M+IS+HS H+P C +C KHC+SFES+REHL  P  L K +C  IF  RGC +CL IFE    L  H  +C L P               G       + S
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGP--LPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGS

Query:  TKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKA
              +A+AL C MVG G+DG++  CA VCL+  +E++IFST+VQP LPVT+YR E TG+  E L+D MPL+ V++++  FLC G+       GA G+ 
Subjt:  TKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKA

Query:  RILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAV
         +LVGH +  D++ L ++YP+ ++R                           Y ++ GK E YE+CV+ MRLY RM+ Q H      + S     +    
Subjt:  RILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAV

Query:  WKQFELEKMSPQQMLQISRSDYYCWCLD--SNP
         KQ +LEKM+ +++ Q S S+Y CWCLD  SNP
Subjt:  WKQFELEKMSPQQMLQISRSDYYCWCLD--SNP

AT2G48100.3 Exonuclease family protein1.8e-6139.34Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGP--LPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGS
        M+IS+HS H+P C +C KHC+SFES+REHL  P  L K +C  IF  RGC +CL IFE    L  H  +C L P               G       + S
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGP--LPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGS

Query:  TKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKA
              +A+AL C MVG G+DG++  CA VCL+  +E++IFST+VQP LPVT+YR E TG+  E L+D MPL+ V++++  FLC G+       GA G+ 
Subjt:  TKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKA

Query:  RILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAV
         +LVGH +  D++ L ++YP+ ++R                           Y ++ GK E YE+CV+ MRLY RM+ Q H      + S     +    
Subjt:  RILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAV

Query:  WKQFELEKMSPQQMLQISRSDYYCWCLD--SNP
         KQ +LEKM+ +++ Q S S+Y CWCLD  SNP
Subjt:  WKQFELEKMSPQQMLQISRSDYYCWCLD--SNP

AT3G27970.1 Exonuclease family protein7.1e-10657.8Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK
        M+IS+HS HEPTC +C KHCRSFESLREHLIGPLPKQ+C NIF+ RGC+ C+ I ESP   R H ERCQ   VNS  +  R   LG  DK M      T 
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK

Query:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARI
              VALSC MVG GSDGSL  CARVC+  +++++IF TYV+P++ VT+YR+E+TG+RPE LRDAMPLKQVQ+KIQEFLCNGEPMWKIRP   GKARI
Subjt:  RYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARI

Query:  LVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVWK
        LVGHG++ DL RL ++YP+ MIR                           Y++  G ++ YE+CVATMRLY RM+ Q HK E YPLA+D QN+ N   W+
Subjt:  LVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVWK

Query:  QFELEKMSPQQMLQISRSDYYCWCLDS
        Q E E+MSP +ML ISRSDYYCWCLDS
Subjt:  QFELEKMSPQQMLQISRSDYYCWCLDS

AT5G40310.1 Exonuclease family protein2.7e-10556.8Show/hide
Query:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK
        MRIS+HS HEPTC +C+KHCRSF+SLREHLIGPLPKQ+C NIF+ RGC+ CL I ESP   R H ERCQL  V S  +M R   LG       + N ST 
Subjt:  MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTK

Query:  RYEN----EAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATG
         Y +      VALSC MVG GSDGSL  CARVC+  ++E+++F TYV+PT+PVTNYR+E TG+RPE LRDAM LK  Q+K+QEFLCNGEPMWKIRP   G
Subjt:  RYEN----EAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATG

Query:  KARILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNF
        KARILVGHG++  L  L ++Y + MIR                           Y++  G ++ YE+CVATMRLY RM+ Q H+ E YPLASD QN +NF
Subjt:  KARILVGHGVEEDLTRLHIDYPNFMIR---------------------------YNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNF

Query:  AVWKQFELEKMSPQQMLQISRSDYYCWCLDS
        A W+Q ELE+MSP+++L +SRSDYYCWCLDS
Subjt:  AVWKQFELEKMSPQQMLQISRSDYYCWCLDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATCTCATTTCACTCATTTCATGAACCCACTTGCTCCCTTTGCCACAAACATTGCAGATCCTTTGAATCTCTTAGAGAACATCTTATTGGGCCACTGCCA
AAGCAAGATTGCAACAACATATTCAATACAAGAGGATGCAAAATCTGCTTAGCCATCTTTGAGAGTCCACTCAAGCTAAGGGCTCACCATGAAAGATGTCAACTT
AGGCCCGTAAATTCCAGGGAAATTATGGGGCGTTTTGGGAACTTGGGGAATGGTGACAAATTGATGACGATGGAAAATGGGAGCACAAAGAGGTATGAAAATGAA
GCAGTGGCATTGAGTTGTACAATGGTGGGCGCTGGCAGCGATGGCTCGCTTCATACCTGCGCAAGGGTTTGCCTTATCCACCAAAATGAGTCCCTCATCTTTTCT
ACTTATGTTCAGCCAACGCTTCCCGTCACTAACTATAGGTTTGAATCCACGGGTGTTCGTCCAGAATACTTGAGAGATGCAATGCCATTGAAGCAAGTTCAAAAG
AAAATTCAAGAGTTTCTATGCAATGGAGAACCAATGTGGAAAATTCGACCTGGAGCTACTGGAAAAGCAAGGATTCTTGTGGGTCATGGCGTAGAAGAAGACCTT
ACACGTTTGCACATTGACTATCCTAATTTCATGATAAGATACAATATGGAAAATGGGAAGAAAGAGGGTTATGAGGAGTGTGTTGCCACAATGAGATTGTACATG
AGAATGAAATCCCAAGTTCACAAAAGAGAGGATTATCCGTTGGCTTCTGATCCACAAAATAAACATAACTTTGCAGTTTGGAAGCAATTTGAGCTTGAGAAGATG
AGCCCACAACAGATGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGCTTAGACTCCAACCCTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAATCTCATTTCACTCATTTCATGAACCCACTTGCTCCCTTTGCCACAAACATTGCAGATCCTTTGAATCTCTTAGAGAACATCTTATTGGGCCACTGCCA
AAGCAAGATTGCAACAACATATTCAATACAAGAGGATGCAAAATCTGCTTAGCCATCTTTGAGAGTCCACTCAAGCTAAGGGCTCACCATGAAAGATGTCAACTT
AGGCCCGTAAATTCCAGGGAAATTATGGGGCGTTTTGGGAACTTGGGGAATGGTGACAAATTGATGACGATGGAAAATGGGAGCACAAAGAGGTATGAAAATGAA
GCAGTGGCATTGAGTTGTACAATGGTGGGCGCTGGCAGCGATGGCTCGCTTCATACCTGCGCAAGGGTTTGCCTTATCCACCAAAATGAGTCCCTCATCTTTTCT
ACTTATGTTCAGCCAACGCTTCCCGTCACTAACTATAGGTTTGAATCCACGGGTGTTCGTCCAGAATACTTGAGAGATGCAATGCCATTGAAGCAAGTTCAAAAG
AAAATTCAAGAGTTTCTATGCAATGGAGAACCAATGTGGAAAATTCGACCTGGAGCTACTGGAAAAGCAAGGATTCTTGTGGGTCATGGCGTAGAAGAAGACCTT
ACACGTTTGCACATTGACTATCCTAATTTCATGATAAGATACAATATGGAAAATGGGAAGAAAGAGGGTTATGAGGAGTGTGTTGCCACAATGAGATTGTACATG
AGAATGAAATCCCAAGTTCACAAAAGAGAGGATTATCCGTTGGCTTCTGATCCACAAAATAAACATAACTTTGCAGTTTGGAAGCAATTTGAGCTTGAGAAGATG
AGCCCACAACAGATGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGCTTAGACTCCAACCCTTCATAA
Protein sequenceShow/hide protein sequence
MRISFHSFHEPTCSLCHKHCRSFESLREHLIGPLPKQDCNNIFNTRGCKICLAIFESPLKLRAHHERCQLRPVNSREIMGRFGNLGNGDKLMTMENGSTKRYENE
AVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHGVEEDL
TRLHIDYPNFMIRYNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVWKQFELEKMSPQQMLQISRSDYYCWCLDSNPS