; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G183100 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G183100
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionphotosynthetic NDH subunit of lumenal location 1, chloroplastic
Genome locationCicolChr09:34476037..34478187
RNA-Seq ExpressionCcUC09G183100
SyntenyCcUC09G183100
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002683 - PsbP, C-terminal
IPR016123 - Mog1/PsbP, alpha/beta/alpha sandwich


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022953447.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita moschata]5.5e-12493.22Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPLLLGVGALA SL  ASPLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_022990449.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita maxima]6.1e-12392.37Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL  A PLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_023534746.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]3.6e-12392.37Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL  A+PLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_038889544.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Benincasa hispida]1.7e-12897.46Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPTTASNWKLRLLPFNEPSTAT SFSSCSTINCSTE+TSREEGHCNRRPLLLGVGALATSLL ASPLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

XP_038889545.1 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Benincasa hispida]1.5e-12697.03Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSC SWVPTTASNWKLRLLPFNEPSTAT SFSSCSTINCSTE+TSREEGHCNRRPLLLGVGALATSLL ASPLFA E+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

TrEMBL top hitse value%identityAlignment
A0A0A0KNR7 PsbP domain-containing protein3.3e-12294.49Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVP TASNWKL+LLPFNEPSTAT SFSS STINCS ER SR+EG  NRRPLLLGVGALATSLL ASPLFAEEIPKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+ YYTFEYKLSSRAFSRTSFATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A1S3CKZ3 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X11.1e-12293.64Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPTTASNWKL+LLPFNEP+TAT SFSS STINCS ERTSR+EG  NRRPLLLGVGALATSLL ASPLFA+E+PKNYRAFVD TDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+NYYTFEYKLSSRAFSRT+FATIAI
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1GN22 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X22.5e-12292.8Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPLLLGVGALA SL  ASPLFA E+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1GN93 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X12.7e-12493.22Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPLLLGVGALA SL  ASPLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

A0A6J1JS28 photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X12.9e-12392.37Show/hide
Query:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY
        MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPLLLGVGALATSL  A PLFAEE+PKNYRAFVDSTDGYSYYY
Subjt:  MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQKATIYDMKERTIDG+NYYTFEYKLSSRA+SRTSFATIA+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

SwissProt top hitse value%identityAlignment
O23403 PsbP domain-containing protein 1, chloroplastic9.1e-0522.32Show/hide
Query:  INCSTERTSREEGHCNRRPLLLGVGALATSLLTAS---PLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD
        INC T+  +++     RR  ++ +G L + L+ +    P      P  +R ++D+ DGYS+ YP +W +      D  F+D  +  +N+ V+F      +
Subjt:  INCSTERTSREEGHCNRRPLLLGVGALATSLLTAS---PLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD

Query:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------FSRTSFATIAIANGRYYTLV
           + + G  +EV   +++         R     Q   +        DG+ YY  E  + S A                 ++R   A + + N R Y++ 
Subjt:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------FSRTSFATIAIANGRYYTLV

Query:  VGANDRRWRRYRDMLKVVADSFRV
        +   ++ +      L+ V DSFRV
Subjt:  VGANDRRWRRYRDMLKVVADSFRV

O80634 Photosynthetic NDH subunit of lumenal location 1, chloroplastic5.6e-7158.47Show/hide
Query:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY
        ++S  C  + PT +   K  +L  N    A C  SS    + S     +  G +  RR  L+GVG L  + + A+ L AEEIPK+Y  FVD  DGYSYYY
Subjt:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKER  DG+NYYTFEY L +  ++ TSFAT+A+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
         N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

P82538 PsbP-like protein 1, chloroplastic6.5e-3539.06Show/hide
Query:  STERTSREEGHCNRRPLL-LGVGALATSLLTASPL-FAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE
        S+  +S  +  C RR ++  GV A   SLL+ +PL FA E  K + A  D+ D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E 
Subjt:  STERTSREEGHCNRRPLL-LGVGALATSLLTASPL-FAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE

Query:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV
        GP  ++   L+K   A PNQK T+ D  E  +DG+ YY FE+ + +R ++R +  TI + NG +YTL  GAN+RRW + +D L  V DSF++
Subjt:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV

Arabidopsis top hitse value%identityAlignment
AT2G39470.1 PsbP-like protein 24.0e-7258.47Show/hide
Query:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY
        ++S  C  + PT +   K  +L  N    A C  SS    + S     +  G +  RR  L+GVG L  + + A+ L AEEIPK+Y  FVD  DGYSYYY
Subjt:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEG-HCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYY

Query:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI
        PSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKER  DG+NYYTFEY L +  ++ TSFAT+A+
Subjt:  PSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAI

Query:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
         N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  ANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

AT2G39470.2 PsbP-like protein 29.8e-7157.56Show/hide
Query:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSY
        ++S  C  + PT +   ++ L P   PS   C         C     + ++G  N   RR  L+GVG L  + + A+ L AEEIPK+Y  FVD  DGYSY
Subjt:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSY

Query:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATI
        YYPSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKER  DG+NYYTFEY L +  ++ TSFAT+
Subjt:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATI

Query:  AIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
        A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Subjt:  AIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

AT2G39470.3 PsbP-like protein 24.2e-4556.98Show/hide
Query:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSY
        ++S  C  + PT +   ++ L P   PS   C         C     + ++G  N   RR  L+GVG L  + + A+ L AEEIPK+Y  FVD  DGYSY
Subjt:  AVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCN---RRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSY

Query:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKE
        YYPSDWREFDFRAHDSAFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ ATIYDMKE
Subjt:  YYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKE

AT3G55330.1 PsbP-like protein 14.6e-3639.06Show/hide
Query:  STERTSREEGHCNRRPLL-LGVGALATSLLTASPL-FAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE
        S+  +S  +  C RR ++  GV A   SLL+ +PL FA E  K + A  D+ D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E 
Subjt:  STERTSREEGHCNRRPLL-LGVGALATSLLTASPL-FAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEE

Query:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV
        GP  ++   L+K   A PNQK T+ D  E  +DG+ YY FE+ + +R ++R +  TI + NG +YTL  GAN+RRW + +D L  V DSF++
Subjt:  GPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRV

AT4G15510.1 Photosystem II reaction center PsbP family protein6.5e-0622.32Show/hide
Query:  INCSTERTSREEGHCNRRPLLLGVGALATSLLTAS---PLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD
        INC T+  +++     RR  ++ +G L + L+ +    P      P  +R ++D+ DGYS+ YP +W +      D  F+D  +  +N+ V+F      +
Subjt:  INCSTERTSREEGHCNRRPLLLGVGALATSLLTAS---PLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKD

Query:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------FSRTSFATIAIANGRYYTLV
           + + G  +EV   +++         R     Q   +        DG+ YY  E  + S A                 ++R   A + + N R Y++ 
Subjt:  ---IHEEGPLDEVVNFLVKH--------RYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRA-----------------FSRTSFATIAIANGRYYTLV

Query:  VGANDRRWRRYRDMLKVVADSFRV
        +   ++ +      L+ V DSFRV
Subjt:  VGANDRRWRRYRDMLKVVADSFRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTTCAACCTCTTGCTTGAGTTGGGTTCCCACCACCGCCTCCAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCCATCAACAGCTACTTGTTCATTTTCTTC
CTGTAGTACCATCAATTGCTCAACTGAGAGAACTTCCCGTGAGGAAGGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTCACCG
CAAGTCCCCTCTTTGCTGAAGAAATCCCGAAAAATTATCGAGCATTCGTAGACTCTACAGATGGGTATTCCTATTACTACCCCTCTGATTGGAGGGAATTTGATTTTAGA
GCCCATGATTCCGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACGGAGAAAAAGGATATCCATGAAGAAGGTCCATTAGATGAGGT
TGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGCTACCATATATGACATGAAGGAGCGAACGATTGATGGGAGAAATTATTACACCTTTGAGTATA
AACTTAGTTCTAGAGCATTCTCCCGCACCTCCTTTGCAACCATAGCCATTGCAAACGGTAGGTACTATACTTTGGTAGTTGGGGCAAATGACAGAAGGTGGAGAAGGTAT
CGCGACATGCTTAAAGTGGTTGCTGATTCATTCAGGGTGTTGGATATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTTCAACCTCTTGCTTGAGTTGGGTTCCCACCACCGCCTCCAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCCATCAACAGCTACTTGTTCATTTTCTTC
CTGTAGTACCATCAATTGCTCAACTGAGAGAACTTCCCGTGAGGAAGGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTCACCG
CAAGTCCCCTCTTTGCTGAAGAAATCCCGAAAAATTATCGAGCATTCGTAGACTCTACAGATGGGTATTCCTATTACTACCCCTCTGATTGGAGGGAATTTGATTTTAGA
GCCCATGATTCCGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACGGAGAAAAAGGATATCCATGAAGAAGGTCCATTAGATGAGGT
TGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGCTACCATATATGACATGAAGGAGCGAACGATTGATGGGAGAAATTATTACACCTTTGAGTATA
AACTTAGTTCTAGAGCATTCTCCCGCACCTCCTTTGCAACCATAGCCATTGCAAACGGTAGGTACTATACTTTGGTAGTTGGGGCAAATGACAGAAGGTGGAGAAGGTAT
CGCGACATGCTTAAAGTGGTTGCTGATTCATTCAGGGTGTTGGATATATGA
Protein sequenceShow/hide protein sequence
MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFR
AHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTFEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRY
RDMLKVVADSFRVLDI