; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC09G185070 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC09G185070
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description26S proteasome non-ATPase regulatory subunit 10
Genome locationCicolChr09:36407959..36409985
RNA-Seq ExpressionCcUC09G185070
SyntenyCcUC09G185070
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0000502 - proteasome complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002110 - Ankyrin repeat
IPR020683 - Ankyrin repeat-containing domain
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599031.1 Acyl-CoA-binding domain-containing protein 6, partial [Cucurbita argyrosperma subsp. sororia]3.2e-4391.67Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKD+ LIKDE LFKAAETGDSSAF AL+  QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQS KLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

KAG7029991.1 26S proteasome non-ATPase regulatory subunit 10, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-4391.67Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKD+ LIKDE LFKAAETGDSSAF AL+  QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQS KLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

XP_022946193.1 26S proteasome non-ATPase regulatory subunit 10 [Cucurbita moschata]3.2e-4391.67Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKD+ LIKDE LFKAAETGDSSAF AL+  QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQS KLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

XP_022999411.1 26S proteasome non-ATPase regulatory subunit 10 [Cucurbita maxima]3.2e-4391.67Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKD+ LIKDE LFKAAETGDSSAF AL+  QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQS KLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

XP_038890172.1 26S proteasome non-ATPase regulatory subunit 10 [Benincasa hispida]2.9e-4490.35Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD
        MDMEID SKDV LIKDE LFKAAETGDSSAFTAL  QQLSQSLSLRNED+RSLLHVAVSSGHADVVKILATADQS KLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLS-GANMSI
        ILDILLS GAN+++
Subjt:  ILDILLS-GANMSI

TrEMBL top hitse value%identityAlignment
A0A0A0KTY4 ANK_REP_REGION domain-containing protein1.3e-4289.81Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKDV LIKD  LFKAAETGDSS FTAL+  QLSQSLSLRNED+RSLLHVAVSSGHADVVKIL TADQS K+INCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

A0A1S3CPG1 26S proteasome non-ATPase regulatory subunit 108.4e-4287.96Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKDV LI D+ LFKAAETGDSS FTAL+  QLSQSLSLRNED+RSLLHVAVSSGHADVVKIL TADQS K+INCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILD LLSG
Subjt:  ILDILLSG

A0A5A7TER9 26S proteasome non-ATPase regulatory subunit 108.4e-4287.96Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKDV LI D+ LFKAAETGDSS FTAL+  QLSQSLSLRNED+RSLLHVAVSSGHADVVKIL TADQS K+INCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILD LLSG
Subjt:  ILDILLSG

A0A6J1G342 26S proteasome non-ATPase regulatory subunit 101.5e-4391.67Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKD+ LIKDE LFKAAETGDSSAF AL+  QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQS KLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

A0A6J1KCY7 26S proteasome non-ATPase regulatory subunit 101.5e-4391.67Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD
        MDMEIDASKD+ LIKDE LFKAAETGDSSAF AL+  QLSQSLSLRNED RSLLHVAVSSGHADVVKILATADQS KLINCADEEGWAPIHSAASIGRSD
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLSG
        ILDILLSG
Subjt:  ILDILLSG

SwissProt top hitse value%identityAlignment
O75832 26S proteasome non-ATPase regulatory subunit 101.6e-0541.79Show/hide
Query:  QSLSLR-NEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILDILL
        +SL+ R ++D+R+ LH A S+GH ++V+ L    Q    +N  D+ GW+P+H AAS GR +I+  LL
Subjt:  QSLSLR-NEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILDILL

Q5RJK8 Acyl-CoA-binding domain-containing protein 67.9e-0529.51Show/hide
Query:  KDEHLFKAAETGDSSAFT-ALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILDILL-SGANMS
        +D+++F      +    T A+ S+ +   +++ +E+ R+LLH A   GH ++VK+L   +     INC D EG   +H AA+   SDI+++LL SGA+ +
Subjt:  KDEHLFKAAETGDSSAFT-ALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILDILL-SGANMS

Query:  -----------ITSCSSVDMII
                   +T C +V +++
Subjt:  -----------ITSCSSVDMII

Q86YT6 E3 ubiquitin-protein ligase MIB12.3e-0441.56Show/hide
Query:  SQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILDILL-SGANMSITS
        S  L+ RN+  ++ LH+AV+ GH  VVK L        L    D EG  P+H A S  R DIL +LL +GA+++IT+
Subjt:  SQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILDILL-SGANMSITS

Q9Z2X2 26S proteasome non-ATPase regulatory subunit 102.1e-0539.19Show/hide
Query:  QSLSLR-NEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILD-ILLSGANMS
        +SL+ R ++D+R+ LH A S+GH ++V+ L    Q    +N  D+ GW+P+H AAS GR +I+  +L+ GA+++
Subjt:  QSLSLR-NEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILD-ILLSGANMS

Q9Z2X3 26S proteasome non-ATPase regulatory subunit 102.7e-0539.19Show/hide
Query:  QSLSLR-NEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILD-ILLSGANMS
        +SL+ R ++D+R+ LH A S+GH ++V+ L    Q    +N  D+ GW+P+H AAS GR +I+  +L+ GA ++
Subjt:  QSLSLR-NEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILD-ILLSGANMS

Arabidopsis top hitse value%identityAlignment
AT2G03430.1 Ankyrin repeat family protein5.8e-2753.1Show/hide
Query:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD
        M++  D +K    ++DE LFKAAE GDSS F +LS +QLS+SL+ RNED RSLLHVA S GH+ +VK+L+++D++  +IN  D+EGWAP+HSAASIG ++
Subjt:  MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSD

Query:  ILDILLS-GANMS
        ++++LL+ GA+++
Subjt:  ILDILLS-GANMS

AT5G12320.1 ankyrin repeat family protein5.2e-0431Show/hide
Query:  KDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILD-ILLSGANMSI
        K + L +AA   D      L+S  L  SL  R+   R+ LH+A ++GH  +V+ L +       IN  ++E  AP+H A   G  +++  ++L+GA++S+
Subjt:  KDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILD-ILLSGANMSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGGAAATCGATGCTTCCAAAGATGTTCCTCTAATCAAAGATGAACATCTTTTCAAAGCCGCAGAGACCGGCGATTCTTCCGCTTTCACTGCCCTCTCA
TCACAGCAGCTTTCTCAATCTCTCTCCCTAAGAAATGAGGATAACCGCTCTCTTCTCCATGTTGCCGTCTCTTCAGGCCACGCCGATGTGGTAAAGATACTGGCT
ACTGCTGATCAGTCTGCTAAATTAATTAACTGCGCCGATGAGGAAGGTTGGGCACCGATTCATTCTGCTGCTAGCATTGGGAGGTCTGATATTTTAGATATATTG
TTGAGCGGAGCAAATATGAGTATCACAAGTTGTAGTAGTGTTGATATGATCATAGCCTCATCTAACTCTAAGGAGACAAATTGTAAGAGAAGGAGCACAAAGGCG
AAACTCCGCCACACCACTGGGCGCCACTCCACTAGGCCACTTGTGCAAGCATGCCCACGTAGGCATGAATCTCACCATGCATACCAGCTCGCTTGCATGTATGCC
AAGTTGTGCCCCACAAGCATGCACTCGTACAAGTTGTGTGCAGACAAGCATGCCTCATGGAGCATGCATGACCTTTGCCTTAGAGGCTAG
mRNA sequenceShow/hide mRNA sequence
CAAATATTTGGATAGTACATATACCAAAAACAACCAAAACCTTTAAACCTTGATTTGATGCGGCCAAATTGCACTCTGTTGTAGGAAGTACAGAGAACGACGCTC
CATTTCGGGCTCGGCGGTTTGAGAGGTTGTTGTCTAATCTTAACCTTCAAGTTCTTGAAATCCATGGATATGGAAATCGATGCTTCCAAAGATGTTCCTCTAATC
AAAGATGAACATCTTTTCAAAGCCGCAGAGACCGGCGATTCTTCCGCTTTCACTGCCCTCTCATCACAGCAGCTTTCTCAATCTCTCTCCCTAAGAAATGAGGAT
AACCGCTCTCTTCTCCATGTTGCCGTCTCTTCAGGCCACGCCGATGTGGTAAAGATACTGGCTACTGCTGATCAGTCTGCTAAATTAATTAACTGCGCCGATGAG
GAAGGTTGGGCACCGATTCATTCTGCTGCTAGCATTGGGAGGTCTGATATTTTAGATATATTGTTGAGCGGAGCAAATATGAGTATCACAAGTTGTAGTAGTGTT
GATATGATCATAGCCTCATCTAACTCTAAGGAGACAAATTGTAAGAGAAGGAGCACAAAGGCGAAACTCCGCCACACCACTGGGCGCCACTCCACTAGGCCACTT
GTGCAAGCATGCCCACGTAGGCATGAATCTCACCATGCATACCAGCTCGCTTGCATGTATGCCAAGTTGTGCCCCACAAGCATGCACTCGTACAAGTTGTGTGCA
GACAAGCATGCCTCATGGAGCATGCATGACCTTTGCCTTAGAGGCTAG
Protein sequenceShow/hide protein sequence
MDMEIDASKDVPLIKDEHLFKAAETGDSSAFTALSSQQLSQSLSLRNEDNRSLLHVAVSSGHADVVKILATADQSAKLINCADEEGWAPIHSAASIGRSDILDIL
LSGANMSITSCSSVDMIIASSNSKETNCKRRSTKAKLRHTTGRHSTRPLVQACPRRHESHHAYQLACMYAKLCPTSMHSYKLCADKHASWSMHDLCLRG