; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G190140 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G190140
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptiongibberellin-regulated protein 14-like
Genome locationCicolChr10:5156684..5157289
RNA-Seq ExpressionCcUC10G190140
SyntenyCcUC10G190140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065729.1 extensin-like [Cucumis melo var. makuwa]3.1e-6777.61Show/hide
Query:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV
        M  FALFTVL   +PF G+VF YDSPAA+PKP KTAHSPSPAHSP VSPPS S SPSKSPT SP + TP ISPALATPPSVAP KAPA+ P+SSP     
Subjt:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV

Query:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA
         SENSP+SSPPSP  FDAS    PVGAPVEPEIPANPISGGSPVGTPSIFPSSSS PM+TP +LAPETAERPGNDASA G+Y IGVEV+ SGLSIWAAWA
Subjt:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA

Query:  F
        F
Subjt:  F

XP_011652729.1 extensin [Cucumis sativus]4.0e-6778.71Show/hide
Query:  MDKFALF-TVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASP
        M KFALF T+L LF+PF G+VF  DSPAA+PKP KT HSPSPAHSP VSPPSH+ SPSKSP  SP V TP ISPALATPPSVAP KAPA+ P+SSP    
Subjt:  MDKFALF-TVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASP

Query:  VGSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAW
          SENSP+SSPPSP  FDAS    PVGAPVEPEIPANPISGGSPVGTPSIFPSSSS PM+TP SLAPETAERPGNDASA GKY IGVEVI SGLSIWAAW
Subjt:  VGSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAW

Query:  AF
        AF
Subjt:  AF

XP_022932347.1 gibberellin-regulated protein 14-like [Cucurbita moschata]2.1e-7181.59Show/hide
Query:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV
        M+KFALFTVLILF+ FT VV GYDSPAAAPKPTKTAHSPSPAHSP VSPP+HSASP  SPT SP   TPAISP+LATPP V+PPKAPA+APVSSPAASPV
Subjt:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV

Query:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA
         S  SPI SPPSP   DASPV  PVGAPVEPEIPANPI+GG+PV TPSIFPSSSS PMSTPASLAPETAE PG DASA GKY IG EVI SGLSIWA WA
Subjt:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA

Query:  F
        F
Subjt:  F

XP_023552940.1 gibberellin-regulated protein 14-like [Cucurbita pepo subsp. pepo]1.6e-6879.6Show/hide
Query:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV
        M+KF LFTVLILF+ FT VVFGYDSPAAAPKPTKTAHSPSPAHSP VSPP+HSASP  SPT SP   TPAISP+LATPP V+PPKAPA+APVSSPAASPV
Subjt:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV

Query:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA
         S      SPPSP   DASPV  PVGAPVEPEIPANPI+GG+PV TPSIFPSSSS PMSTPASLAPETAE PG DASA GKY IG EVI SGLS+WA WA
Subjt:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA

Query:  F
        F
Subjt:  F

XP_038904208.1 calphotin-like [Benincasa hispida]1.6e-7988.06Show/hide
Query:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV
        MDKFALFTVLILF+PFTGVVFGYDSPAAAPKPTKTAHSPSPAHSP VSPPS SASP K P  SP   TPAISPA ATPPSVAPPKAPASAPVSSPA SPV
Subjt:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV

Query:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA
         SE SP+SSPPSPP  DASPVATPVG PVEPEIPANPISGG+PVGTPSIFPSSSS PMSTPASLAPETAERPGNDASA GK  IGVEVI SGLSIWAAWA
Subjt:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A0A0L269 Lipid binding protein1.9e-6778.71Show/hide
Query:  MDKFALF-TVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASP
        M KFALF T+L LF+PF G+VF  DSPAA+PKP KT HSPSPAHSP VSPPSH+ SPSKSP  SP V TP ISPALATPPSVAP KAPA+ P+SSP    
Subjt:  MDKFALF-TVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASP

Query:  VGSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAW
          SENSP+SSPPSP  FDAS    PVGAPVEPEIPANPISGGSPVGTPSIFPSSSS PM+TP SLAPETAERPGNDASA GKY IGVEVI SGLSIWAAW
Subjt:  VGSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAW

Query:  AF
        AF
Subjt:  AF

A0A5A7VJY8 Extensin-like1.5e-6777.61Show/hide
Query:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV
        M  FALFTVL   +PF G+VF YDSPAA+PKP KTAHSPSPAHSP VSPPS S SPSKSPT SP + TP ISPALATPPSVAP KAPA+ P+SSP     
Subjt:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV

Query:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA
         SENSP+SSPPSP  FDAS    PVGAPVEPEIPANPISGGSPVGTPSIFPSSSS PM+TP +LAPETAERPGNDASA G+Y IGVEV+ SGLSIWAAWA
Subjt:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA

Query:  F
        F
Subjt:  F

A0A6J1DWL9 classical arabinogalactan protein 4-like1.0e-6374.27Show/hide
Query:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV
        M+K A  TVL+LFAPFTGVV  YD+PA +PKPTKT HSP P HSPAVS PSHSASPSKSP  SP   TP ISPAL+TPP+ A P+APA+AP SSP ASPV
Subjt:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV

Query:  GSENSPISSPPSPPSFDASPVA----TPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASAL-GKYNIGVEVIFSGLSI
        GSE SP+SSPPSPP   ASPV+    TP G+P EPEIPANPI+GGSPV TPSIFPSSSS PMS+P SLAPETAERPGNDASA   KY IG EVI SG+SI
Subjt:  GSENSPISSPPSPPSFDASPVA----TPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASAL-GKYNIGVEVIFSGLSI

Query:  WAAWAF
        WAAWAF
Subjt:  WAAWAF

A0A6J1EWE6 gibberellin-regulated protein 14-like1.0e-7181.59Show/hide
Query:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV
        M+KFALFTVLILF+ FT VV GYDSPAAAPKPTKTAHSPSPAHSP VSPP+HSASP  SPT SP   TPAISP+LATPP V+PPKAPA+APVSSPAASPV
Subjt:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV

Query:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA
         S  SPI SPPSP   DASPV  PVGAPVEPEIPANPI+GG+PV TPSIFPSSSS PMSTPASLAPETAE PG DASA GKY IG EVI SGLSIWA WA
Subjt:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA

Query:  F
        F
Subjt:  F

A0A6J1L107 gibberellin-regulated protein 14-like4.3e-6777.61Show/hide
Query:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV
        M+ FALFTVLILF+ FT VV  YDS AAAPKPTKTA+SPSPAHSP  SPPSHSASP  SPT SP   TPAISP+L TPP V+PPK PA+APVSSPAASPV
Subjt:  MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPV

Query:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA
         S  SP+ SPPSP   DASPV  PVGAPVEPEIPANPI+GG+PV TPSIFPSSSS PMSTPASLAPETAE PG DAS  GKY IG EVI SGLSIWA WA
Subjt:  GSENSPISSPPSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWA

Query:  F
        F
Subjt:  F

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAATTTGCTCTGTTTACTGTTCTGATTTTGTTTGCGCCATTCACCGGCGTCGTTTTCGGTTACGATTCGCCGGCCGCCGCTCCAAAACCCACTAAAACGGCTCA
TTCTCCGTCTCCGGCGCATTCTCCTGCGGTTTCGCCGCCGAGTCACTCGGCATCTCCGTCGAAGTCTCCTACTGTTTCTCCATCGGTGGCAACTCCGGCTATTTCTCCTG
CATTGGCTACCCCACCATCTGTAGCGCCCCCGAAGGCTCCGGCTTCGGCGCCGGTTTCTTCGCCGGCGGCAAGTCCGGTAGGGAGTGAAAATTCTCCGATTTCGTCCCCG
CCGTCTCCTCCGTCTTTCGATGCTTCTCCGGTGGCTACGCCGGTTGGTGCTCCAGTGGAACCAGAAATTCCTGCAAATCCGATCTCGGGAGGGTCTCCGGTGGGGACGCC
GTCGATATTCCCGTCGAGTAGCAGTTCGCCAATGTCGACTCCGGCAAGCCTAGCACCGGAAACGGCGGAGAGGCCTGGAAACGACGCGTCGGCGCTAGGGAAGTACAATA
TCGGGGTGGAGGTTATTTTTAGTGGGCTATCTATTTGGGCCGCTTGGGCCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAATTTGCTCTGTTTACTGTTCTGATTTTGTTTGCGCCATTCACCGGCGTCGTTTTCGGTTACGATTCGCCGGCCGCCGCTCCAAAACCCACTAAAACGGCTCA
TTCTCCGTCTCCGGCGCATTCTCCTGCGGTTTCGCCGCCGAGTCACTCGGCATCTCCGTCGAAGTCTCCTACTGTTTCTCCATCGGTGGCAACTCCGGCTATTTCTCCTG
CATTGGCTACCCCACCATCTGTAGCGCCCCCGAAGGCTCCGGCTTCGGCGCCGGTTTCTTCGCCGGCGGCAAGTCCGGTAGGGAGTGAAAATTCTCCGATTTCGTCCCCG
CCGTCTCCTCCGTCTTTCGATGCTTCTCCGGTGGCTACGCCGGTTGGTGCTCCAGTGGAACCAGAAATTCCTGCAAATCCGATCTCGGGAGGGTCTCCGGTGGGGACGCC
GTCGATATTCCCGTCGAGTAGCAGTTCGCCAATGTCGACTCCGGCAAGCCTAGCACCGGAAACGGCGGAGAGGCCTGGAAACGACGCGTCGGCGCTAGGGAAGTACAATA
TCGGGGTGGAGGTTATTTTTAGTGGGCTATCTATTTGGGCCGCTTGGGCCTTTTGA
Protein sequenceShow/hide protein sequence
MDKFALFTVLILFAPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPAVSPPSHSASPSKSPTVSPSVATPAISPALATPPSVAPPKAPASAPVSSPAASPVGSENSPISSP
PSPPSFDASPVATPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSSPMSTPASLAPETAERPGNDASALGKYNIGVEVIFSGLSIWAAWAF