; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G190200 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G190200
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionDNA-directed RNA polymerases I and III subunit RPAC1
Genome locationCicolChr10:5218895..5225820
RNA-Seq ExpressionCcUC10G190200
SyntenyCcUC10G190200
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0001054 - RNA polymerase I activity (molecular function)
GO:0001056 - RNA polymerase III activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001514 - DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR011262 - DNA-directed RNA polymerase, insert domain
IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR033901 - DNA-directed RNA polymerases I and III subunit AC40
IPR036603 - RNA polymerase, RBP11-like subunit
IPR036643 - DNA-directed RNA polymerase, insert domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia]6.0e-20089.77Show/hide
Query:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE
        MSGKDK+LH MSES++E++ VGKEGIE IMNLP VPMKLPP +  QR RVECKADAP+HTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID KEDD+E
Subjt:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGK RLT TSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQD+LPEF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIED+A+G+KRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS

XP_022936430.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata]6.0e-20089.77Show/hide
Query:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE
        MSGKDK+LH MSES++E++ VGKEGIE IMNLP VPMKLPP +  QR RVECKADAP+HTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID KEDD+E
Subjt:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGK RLT TSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQD+LPEF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIED+A+G+KRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS

XP_023005438.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima]7.8e-20089.77Show/hide
Query:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE
        MSG+DK+LH+MSES++E++ VGKEGIE IMNLP VPMKLPP +  QR RVECKADAP+HTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID KEDD+E
Subjt:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGK RLT TS+ALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQD+LPEF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIED+A+G+KRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS

XP_023540473.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo]4.6e-20090.03Show/hide
Query:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE
        MSGKDK+LH MSES++E + VGKEGIE IMNLP VPMKLPP +  QR RVECKADAP+HTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID KEDD+E
Subjt:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGK RLT TSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQD+LPEF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIED+A+G+KRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS

XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida]2.8e-20593.09Show/hide
Query:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE
        MSGKDKSLH MS+SE+E++GV KEGIE IMNLP VPMKLPP L  QR RVECKADAP+HTDTIQYSGAFASMGVDNSLRLDYFR+NFKIEVID KEDDIE
Subjt:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGL+PIHVDPRLFEYSDKDTPNEKNTIVFRLHA CERGK RLTVTSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQD+LPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEI+DELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
        ELK+KCPVNVFDIED+A G+KRATVARPRACTLCRECIRGD WEKRVALRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS

TrEMBL top hitse value%identityAlignment
A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC11.1e-19689.8Show/hide
Query:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE
        MSGKDK+LH MSESE+E++GV KEGIE IMNLP VPMKLPP +  QR RVECKADAP+HTDTIQYSGAFASMG DNSLRLD FR+NFKIEVID KEDDIE
Subjt:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP
        FDMIGIDP+LANAFRRILI+EVPTMAIEKVL ANNTSIVQDEVLAHRLGL+PI VDPRLF+YSDKD PNE NTIVFRLHA CERGK RLTVTSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSL-PEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQ++L  EFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVL+EEIEDELA
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSL-PEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA

Query:  EELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
        EEL++KCPVNVFDIED+A G+KRATVARPR CTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt:  EELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS

A0A1S4DX61 DNA-directed RNA polymerases I and III subunit RPAC16.9e-19488.78Show/hide
Query:  MSGKDKSLH-TMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDI
        MSGKDK+LH  M+ESE+E++ VGKEGIE IMNLP VPMKLPP +  QR RVECK DAP+HTDTIQYSGAFASMG DNSLRLD FR+NFKIEVI+ K DDI
Subjt:  MSGKDKSLH-TMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDI

Query:  EFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWL
        EFDMIGIDP+LANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPI VDPRLF+YSDKD PNE NTIVFRLHARCERGK RLTV S+ALTWL
Subjt:  EFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWL

Query:  PNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
        PNGSEFPLVSDKS+ NSKP+TYTSFSCSQD LPEFS N IGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLEEIEDELA
Subjt:  PNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA

Query:  EELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
        EELK KCPVNVFDIED+A G+KRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP VLFTEAVKILEDKCERLIAELS
Subjt:  EELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC19.0e-19489.76Show/hide
Query:  MSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSL
        MS+SE+E+   GKEGIE IMNLP VPMKLPP L  QR RVECKADAP+HTDTIQYSGA+ASMGVDNSLRLDYFR+NFKIEVID  EDDIEFDMIGIDP+L
Subjt:  MSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSL

Query:  ANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLPNGSEFPLVSD
        ANAFRRILIAEVPTMAIEKVLVANNTS++QDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK RLTVTSK LTWLPNGSEFPLVSD
Subjt:  ANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLPNGSEFPLVSD

Query:  KSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNV
        KSV NSKPKTYTSFSCSQD+LPEFSNN IGPKD+DII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELAEELK+KCPV+V
Subjt:  KSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNV

Query:  FDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
        FDIED+A+G+KRA VARPR+CTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt:  FDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC12.9e-20089.77Show/hide
Query:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE
        MSGKDK+LH MSES++E++ VGKEGIE IMNLP VPMKLPP +  QR RVECKADAP+HTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID KEDD+E
Subjt:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGK RLT TSKALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSN+KPKTYTSFSCSQD+LPEF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIED+A+G+KRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC13.8e-20089.77Show/hide
Query:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE
        MSG+DK+LH+MSES++E++ VGKEGIE IMNLP VPMKLPP +  QR RVECKADAP+HTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID KEDD+E
Subjt:  MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIE

Query:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP
        FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGK RLT TS+ALTWLP
Subjt:  FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLP

Query:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVSNSKPKTYTSFSCSQD+LPEF+NNPIGPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
        ELK KCPVNVFDIED+A+G+KRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt:  ELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS

SwissProt top hitse value%identityAlignment
O15160 DNA-directed RNA polymerases I and III subunit RPAC15.6e-7645.93Show/hide
Query:  TIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFE
        T  + G ++  G D++   D F  NF+++V+   E+ +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE+LAHRLGLIPIH DPRLFE
Subjt:  TIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFE

Query:  YSDK--DTPNEKNTIVFRLHARCERGKRLT--------------VTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDI
        Y ++  +   E +T+ FRL  RC R                   V ++ +TW+P G++  L                          F    I P   DI
Subjt:  YSDK--DTPNEKNTIVFRLHARCERGKRLT--------------VTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDI

Query:  ILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKR
        ++A+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL       V +++++  G+K A VA PR  T  RE  R +  +K 
Subjt:  ILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKR

Query:  VALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAEL
        V L RV+DH+IF +ESTG LPP VL +EA+K+L  KC R + EL
Subjt:  VALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAEL

O94616 DNA-directed RNA polymerases I and III subunit RPAC14.9e-6438.48Show/hide
Query:  RPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAH
        R  +   +D      ++ + G +     DN   LD F+ N K+ +    ++ + F++ GID S+ANAFRRILIAE+PT+A E V + NNTSI+QDEVL+H
Subjt:  RPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAH

Query:  RLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFRLHARCERG----------KRLTVTSKA----LTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
        R+GL+PI  DP +F++     P ++      +T+VF L+ +CE            KRL V S+     L W P G +                       
Subjt:  RLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFRLHARCERG----------KRLTVTSKA----LTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS

Query:  QDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVAR
              F++NPI   + DI++A+L PGQEI+LEAHA+ G+G+ HAK+SPVATA YR+LP + +L  IE E A + ++  P  V ++E+  DG+K+A VA 
Subjt:  QDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVAR

Query:  PRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKC
         R  T+ REC+R   +  +V L RV+DH++F +ESTG + P VLF +++ +L+ KC
Subjt:  PRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKC

P52432 DNA-directed RNA polymerases I and III subunit RPAC14.0e-7446.51Show/hide
Query:  TIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFE
        T  + G +A  G D++   + F  NF+++V+   ED +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE+LAHRLGLIPI  DPRLFE
Subjt:  TIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFE

Query:  YSD--KDTPNEKNTIVFRLHARCERGKRLT--------------VTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDI
        Y +  ++   E +T+ FRL  RC R                   V ++ +TW+P G++                        D  PE     I P   DI
Subjt:  YSD--KDTPNEKNTIVFRLHARCERGKRLT--------------VTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDI

Query:  ILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKR
        ++A+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP + LLE +E E AEEL +     V ++E++  G+K A VA  R  T  RE  R +  +K 
Subjt:  ILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKR

Query:  VALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAEL
        V L RV+DH+IF +ESTG LPP VL +EA+KIL  KC R + EL
Subjt:  VALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAEL

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC12.5e-7646.22Show/hide
Query:  TIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFE
        T  + G ++  G D++   D F  NF+++V+   E+ +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE+LAHRLGLIPIH DPRLFE
Subjt:  TIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFE

Query:  YSDK--DTPNEKNTIVFRLHARCERGKRLT--------------VTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDI
        Y ++  +   E +T+ FRL  RC R                   V ++ +TW+P G++  L                          F    I P   DI
Subjt:  YSDK--DTPNEKNTIVFRLHARCERGKRLT--------------VTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDI

Query:  ILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKR
        ++A+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL       V +++++  G+K A VA PR  T  RE  R +  +K 
Subjt:  ILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVARPRACTLCRECIRGDAWEKR

Query:  VALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAEL
        V L RV+DHFIF +ESTG LPP VL +EA+K+L  KC+R + EL
Subjt:  VALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAEL

Q54SN4 DNA-directed RNA polymerases I and III subunit rpac13.2e-7142.33Show/hide
Query:  PRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQ
        P L  +R +V        +     YSGA+ S+G DNS  L+ F+ NFKI ++    +++ F+MIGID  +ANA RRI+I+E+PTMAIEKV + NNTSI+Q
Subjt:  PRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQ

Query:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTIVFRLHARCER----GKRL--TVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSL
        DEVLAHRLG+IPI VDPR F +     PN+    ++T++F+L  +CE+    GK +  T  SK L W+P   +                       ++  
Subjt:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTIVFRLHARCER----GKRL--TVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSL

Query:  PEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVARPRAC
        P   + P  P + DI + +L PGQ I+++ +  K +G+ H KWSPV TA YR+ P + + + I+ + A +L EKCP  VFDIED      +   ARP  C
Subjt:  PEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVARPRAC

Query:  TLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKC
        T+CRECIR   +E+ V + RV+DHFIF IESTGAL  + +F EA+KI  +KC
Subjt:  TLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKC

Arabidopsis top hitse value%identityAlignment
AT1G60620.1 RNA polymerase I subunit 432.0e-13767.67Show/hide
Query:  IMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIE
        I +LP VP  LPP L  QR RV CK D+ +H   I +SGA++SMGVDNS+RL+ F  +FK++VI   E D+ FDMIG+   +ANAFRRIL+AE+P+MAIE
Subjt:  IMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIE

Query:  KVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERG-KRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
        KV VANNTS++QDEVLAHRLGLIPI  DPRLFEY S+ D PNEKNTIVF+LH +C +G  R  V +  L WLPNGSE  L+ +   S + PKTYTSF+ S
Subjt:  KVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERG-KRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS

Query:  QDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVAR
        QDS PEF+ NPI P   DI++A+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+E E + AEEL + CP  VFDIEDM  GRKRATVAR
Subjt:  QDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVAR

Query:  PRACTLCRECIR-GDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
        PR C+LCRECIR G  WE +V LRRVK+HFIF IESTG+ PP+VLF EAVKILEDKCER+I+ELS
Subjt:  PRACTLCRECIR-GDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS

AT1G60850.1 DNA-directed RNA polymerase family protein8.5e-12865Show/hide
Query:  IMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAF-ASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAI
        I +LP VP  LPP L  Q+ RV  K +AP HT +  YSG + +S   D++++L  F  NFK++V+   + D+EFDMIGID + ANAFRRILIAEVP+MAI
Subjt:  IMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAF-ASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
        EKVL+A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + + RL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC

Query:  SQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVA
        SQDSLPEF+NNPI P D DI++A+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L   CP NVFDIEDM  G+KRATVA
Subjt:  SQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVA

Query:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERL
        +PR CTLC+EC+R D     V L  VK+HFIF IESTG+LPP+VLFTEAVKILE KCE +
Subjt:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERL

AT1G60850.2 DNA-directed RNA polymerase family protein8.5e-12865Show/hide
Query:  IMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAF-ASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAI
        I +LP VP  LPP L  Q+ RV  K +AP HT +  YSG + +S   D++++L  F  NFK++V+   + D+EFDMIGID + ANAFRRILIAEVP+MAI
Subjt:  IMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAF-ASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
        EKVL+A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + + RL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC

Query:  SQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVA
        SQDSLPEF+NNPI P D DI++A+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L   CP NVFDIEDM  G+KRATVA
Subjt:  SQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDMADGRKRATVA

Query:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERL
        +PR CTLC+EC+R D     V L  VK+HFIF IESTG+LPP+VLFTEAVKILE KCE +
Subjt:  RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERL

AT1G60850.3 DNA-directed RNA polymerase family protein2.9e-8863.74Show/hide
Query:  IMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAF-ASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAI
        I +LP VP  LPP L  Q+ RV  K +AP HT +  YSG + +S   D++++L  F  NFK++V+   + D+EFDMIGID + ANAFRRILIAEVP+MAI
Subjt:  IMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAF-ASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
        EKVL+A NTS++ DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + + RL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGK-RLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC

Query:  SQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
        SQDSLPEF+NNPI P D DI++A+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEV
Subjt:  SQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV

AT2G15430.1 DNA-directed RNA polymerase family protein6.4e-3533.55Show/hide
Query:  KIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFRLHA
        KI++ + K+D  +F++   D S+ANA RR++I+EVPT+AI+ V +  N+S++ DE +AHRLGLIP+  +        R  +  D D   E  ++ FRL +
Subjt:  KIEVIDFKEDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFRLHA

Query:  RCERGKRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAW
        +C   + L VTS+ L            +D +V+   P  +T  S   DS           +   II+ +L  GQE++L A A KG+GK HAKWSP AT  
Subjt:  RCERGKRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAW

Query:  YRMLPEVVLLEEIEDELAEELK----EKCPVNVFDIEDMADGRKRATVARPRACTLCRECI-RGDAWEK--RVALRRVKDHFIFKIESTGALPPQVLFTE
        +   P++++ E++ D L++E K    E  P  VF ++ +    ++  V  P A T   E I + +A  K   + +    D FIF +ESTGA+    L   
Subjt:  YRMLPEVVLLEEIEDELAEELK----EKCPVNVFDIEDMADGRKRATVARPRACTLCRECI-RGDAWEK--RVALRRVKDHFIFKIESTGALPPQVLFTE

Query:  AVKILEDKCE
        A+ +L+ K +
Subjt:  AVKILEDKCE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGTAAAGATAAGAGTTTGCATACTATGTCGGAGTCGGAAGCTGAAGAAGATGGTGTTGGGAAAGAAGGCATTGAAGTTATTATGAACCTTCCAGCCGTA
CCCATGAAGCTTCCGCCACGTTTGGCATTCCAGAGACCTCGAGTCGAATGCAAAGCCGACGCTCCCCTTCATACAGATACCATACAGTATTCTGGAGCATTTGCT
TCGATGGGTGTTGATAACAGTCTACGTCTGGATTATTTTCGACACAACTTTAAAATTGAAGTTATTGATTTCAAAGAGGATGACATTGAGTTTGACATGATTGGC
ATTGATCCATCACTCGCTAATGCATTTCGAAGAATCCTGATAGCCGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTGTTGCTAACAATACATCAATAGTCCAA
GATGAAGTGCTTGCCCATAGGTTAGGTCTCATTCCAATTCATGTTGATCCGAGGCTTTTTGAGTACTCAGATAAAGACACACCAAATGAGAAGAATACAATTGTT
TTTAGACTCCACGCTCGCTGTGAACGTGGAAAACGTCTTACAGTGACGTCAAAAGCATTGACGTGGTTGCCGAATGGCAGTGAATTTCCCTTGGTATCAGACAAA
TCAGTTTCAAACTCAAAACCCAAAACCTACACTTCTTTTAGTTGCAGCCAAGACTCACTGCCAGAATTTTCCAACAATCCAATTGGTCCAAAGGACAGTGATATT
ATACTGGCTAGACTTGGCCCGGGTCAGGAAATTGAACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCAGTGGCCACTGCTTGG
TACAGGATGCTTCCTGAGGTTGTACTCCTGGAAGAGATAGAGGATGAGCTAGCTGAAGAACTAAAAGAGAAATGTCCTGTTAATGTATTTGACATTGAAGACATG
GCTGATGGTAGGAAAAGGGCAACTGTAGCACGCCCACGAGCTTGCACATTGTGTAGAGAATGCATAAGAGGAGATGCGTGGGAGAAACGTGTCGCATTGCGTCGC
GTGAAAGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACCTCCCCAGGTGCTCTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTA
ATTGCCGAGCTGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGTAAAGATAAGAGTTTGCATACTATGTCGGAGTCGGAAGCTGAAGAAGATGGTGTTGGGAAAGAAGGCATTGAAGTTATTATGAACCTTCCAGCCGTA
CCCATGAAGCTTCCGCCACGTTTGGCATTCCAGAGACCTCGAGTCGAATGCAAAGCCGACGCTCCCCTTCATACAGATACCATACAGTATTCTGGAGCATTTGCT
TCGATGGGTGTTGATAACAGTCTACGTCTGGATTATTTTCGACACAACTTTAAAATTGAAGTTATTGATTTCAAAGAGGATGACATTGAGTTTGACATGATTGGC
ATTGATCCATCACTCGCTAATGCATTTCGAAGAATCCTGATAGCCGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTGTTGCTAACAATACATCAATAGTCCAA
GATGAAGTGCTTGCCCATAGGTTAGGTCTCATTCCAATTCATGTTGATCCGAGGCTTTTTGAGTACTCAGATAAAGACACACCAAATGAGAAGAATACAATTGTT
TTTAGACTCCACGCTCGCTGTGAACGTGGAAAACGTCTTACAGTGACGTCAAAAGCATTGACGTGGTTGCCGAATGGCAGTGAATTTCCCTTGGTATCAGACAAA
TCAGTTTCAAACTCAAAACCCAAAACCTACACTTCTTTTAGTTGCAGCCAAGACTCACTGCCAGAATTTTCCAACAATCCAATTGGTCCAAAGGACAGTGATATT
ATACTGGCTAGACTTGGCCCGGGTCAGGAAATTGAACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCAGTGGCCACTGCTTGG
TACAGGATGCTTCCTGAGGTTGTACTCCTGGAAGAGATAGAGGATGAGCTAGCTGAAGAACTAAAAGAGAAATGTCCTGTTAATGTATTTGACATTGAAGACATG
GCTGATGGTAGGAAAAGGGCAACTGTAGCACGCCCACGAGCTTGCACATTGTGTAGAGAATGCATAAGAGGAGATGCGTGGGAGAAACGTGTCGCATTGCGTCGC
GTGAAAGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACCTCCCCAGGTGCTCTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTA
ATTGCCGAGCTGTCTTAATTCTTCTTGTCCAAAAGACACGGACCTGTATATTATTTCATTATATTTAGAGGTCACCAATTTTTGTAATATATGAGTGGAATAGCA
AGTTGTTCTTTTGAATTGACAGTGGAATAACTTCACCAATGGATTACCAAAGGTATCTTGGACGTTGGACCATTCATATGTGTTTATTTGATTGGATTTGTAGAT
GACAATATTGAAGTTGAAAAGAACTAACTTGAACTAATTTAGTACAGCTGTAGAAAGAGAAACTTTAGACCATATCAAATTATCACTTAACATTTTTATTTTCTT
TTGGAGCTGATGGTGAAATTATACTGATGAAATGAAGC
Protein sequenceShow/hide protein sequence
MSGKDKSLHTMSESEAEEDGVGKEGIEVIMNLPAVPMKLPPRLAFQRPRVECKADAPLHTDTIQYSGAFASMGVDNSLRLDYFRHNFKIEVIDFKEDDIEFDMIG
IDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKRLTVTSKALTWLPNGSEFPLVSDK
SVSNSKPKTYTSFSCSQDSLPEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKEKCPVNVFDIEDM
ADGRKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS