; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G190350 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G190350
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionserine-rich protein-related
Genome locationCicolChr10:5373747..5374150
RNA-Seq ExpressionCcUC10G190350
SyntenyCcUC10G190350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55991.1 hypothetical protein Csa_011649 [Cucumis sativus]4.4e-1967.09Show/hide
Query:  ALPEYDMEELKKTPRLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD
        A+ E + ++LKK   LL+SPTALSR+T     KSNCLCSPTTHIGSFRCRRHR+++++RGGSVGSNLSDL +KSEA  D
Subjt:  ALPEYDMEELKKTPRLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD

PON86349.1 hypothetical protein TorRG33x02_179150 [Trema orientale]1.7e-1561.45Show/hide
Query:  LPEYDMEELKK-------TPRLLLSPTAL-SRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL
        +PE ++EELKK       +PR + +P    S  T+ NCLCSPTTH GSFRCR HR+S M RGGSVGSNLS+LARKS A GDSL
Subjt:  LPEYDMEELKK-------TPRLLLSPTAL-SRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL

TYK19387.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]2.8e-1865.82Show/hide
Query:  ALPEYDMEELKKTPRLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD
        A+ E + ++LKK   LL+SPTALSR+T     KSNCLCSPTTHIGSFRCRRHR++ M+RG SVGSNLSDL +KSE   D
Subjt:  ALPEYDMEELKKTPRLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD

XP_010103953.1 uncharacterized protein LOC21403113 [Morus notabilis]4.5e-1662.5Show/hide
Query:  LPEYDMEELKKTPRLLLSPTALSRITKS-----NCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL
        +P+ ++ ELKK   LL SP A   +TKS     NCLCSPTTH GSFRCR HR+S M RGGSVGSNLS+LARK  A  DSL
Subjt:  LPEYDMEELKKTPRLLLSPTALSRITKS-----NCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL

XP_022143490.1 uncharacterized protein LOC111013367 [Momordica charantia]2.3e-2070.73Show/hide
Query:  ALPEYDMEELKKTP-RLLLSPTALSRI-----TKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL
        ALPE D++ELKK+   L++SPTALSR+     TKSNCLCSPTTHIGSFRCRRHR++ ++RGGSVGSNLSDLA+KS A  DSL
Subjt:  ALPEYDMEELKKTP-RLLLSPTALSRI-----TKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL

TrEMBL top hitse value%identityAlignment
A0A0A0L7C7 Uncharacterized protein2.1e-1967.09Show/hide
Query:  ALPEYDMEELKKTPRLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD
        A+ E + ++LKK   LL+SPTALSR+T     KSNCLCSPTTHIGSFRCRRHR+++++RGGSVGSNLSDL +KSEA  D
Subjt:  ALPEYDMEELKKTPRLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD

A0A2P5ELH4 Uncharacterized protein8.4e-1661.45Show/hide
Query:  LPEYDMEELKK-------TPRLLLSPTAL-SRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL
        +PE ++EELKK       +PR + +P    S  T+ NCLCSPTTH GSFRCR HR+S M RGGSVGSNLS+LARKS A GDSL
Subjt:  LPEYDMEELKK-------TPRLLLSPTAL-SRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL

A0A5D3D753 Putative PGPS/D10 protein1.4e-1865.82Show/hide
Query:  ALPEYDMEELKKTPRLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD
        A+ E + ++LKK   LL+SPTALSR+T     KSNCLCSPTTHIGSFRCRRHR++ M+RG SVGSNLSDL +KSE   D
Subjt:  ALPEYDMEELKKTPRLLLSPTALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGD

A0A6J1CNY2 uncharacterized protein LOC1110133671.1e-2070.73Show/hide
Query:  ALPEYDMEELKKTP-RLLLSPTALSRI-----TKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL
        ALPE D++ELKK+   L++SPTALSR+     TKSNCLCSPTTHIGSFRCRRHR++ ++RGGSVGSNLSDLA+KS A  DSL
Subjt:  ALPEYDMEELKKTP-RLLLSPTALSRI-----TKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL

W9SBP1 Uncharacterized protein2.2e-1662.5Show/hide
Query:  LPEYDMEELKKTPRLLLSPTALSRITKS-----NCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL
        +P+ ++ ELKK   LL SP A   +TKS     NCLCSPTTH GSFRCR HR+S M RGGSVGSNLS+LARK  A  DSL
Subjt:  LPEYDMEELKKTPRLLLSPTALSRITKS-----NCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein2.7e-0656.76Show/hide
Query:  ITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNL
        ITK+ C+CSPTTH GSF+C+ HRT ++ R  SV +N+
Subjt:  ITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNL

AT1G67910.1 unknown protein3.5e-0663.64Show/hide
Query:  ITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSV
        +TK+NCLCSPTTH GSFRCR HR+ ++ R  S+
Subjt:  ITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSV

AT1G67910.2 unknown protein3.5e-0663.64Show/hide
Query:  ITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSV
        +TK+NCLCSPTTH GSFRCR HR+ ++ R  S+
Subjt:  ITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSV

AT3G13227.1 serine-rich protein-related4.1e-0760.87Show/hide
Query:  SRITKSNCLCSPTTHIGSFRCRRHRTST---MTRGGSVGSNLSDLA
        S   + NCLC+PTTH GSFRCR HR +    M+RG SV SNLS LA
Subjt:  SRITKSNCLCSPTTHIGSFRCRRHRTST---MTRGGSVGSNLSDLA

AT5G55980.1 serine-rich protein-related4.7e-1152.31Show/hide
Query:  TPRLLLSPTALSRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSD-LARKSEAAGDSL
        +P L    ++  + T+ NCLCSPTTH GSFRCR HR  ++TR GS+GSNL+  L+ KS    DSL
Subjt:  TPRLLLSPTALSRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSD-LARKSEAAGDSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCATTGCCGGAATACGACATGGAAGAGTTGAAGAAAACCCCACGTTTGTTGTTGTCACCAACAGCCTTATCTCGCATCACAAAATCCAACTGTTTGTGCTCTCC
GACCACCCATATTGGATCTTTCAGGTGTCGGCGTCACCGGACCTCCACGATGACTCGTGGCGGCTCCGTCGGCTCCAATCTCTCTGATTTGGCTCGCAAGTCTGAGGCTG
CCGGTGACTCGTTATTTTCTCTTCTTCATCTTCACCTTCTTTCTTTTGAATGGTTGTATGAATTACAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCATTGCCGGAATACGACATGGAAGAGTTGAAGAAAACCCCACGTTTGTTGTTGTCACCAACAGCCTTATCTCGCATCACAAAATCCAACTGTTTGTGCTCTCC
GACCACCCATATTGGATCTTTCAGGTGTCGGCGTCACCGGACCTCCACGATGACTCGTGGCGGCTCCGTCGGCTCCAATCTCTCTGATTTGGCTCGCAAGTCTGAGGCTG
CCGGTGACTCGTTATTTTCTCTTCTTCATCTTCACCTTCTTTCTTTTGAATGGTTGTATGAATTACAAGTTTGA
Protein sequenceShow/hide protein sequence
MGALPEYDMEELKKTPRLLLSPTALSRITKSNCLCSPTTHIGSFRCRRHRTSTMTRGGSVGSNLSDLARKSEAAGDSLFSLLHLHLLSFEWLYELQV