; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G190360 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G190360
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPSI-G
Genome locationCicolChr10:5375564..5376248
RNA-Seq ExpressionCcUC10G190360
SyntenyCcUC10G190360
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000549 - Photosystem I PsaG/PsaK protein
IPR016370 - Photosystem I PsaG/PsaK, plant
IPR017494 - Photosystem I PsaG, plant
IPR023618 - Photosystem I PsaG/PsaK domain, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596752.1 Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-6786.71Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MAAAASSSAVFAA +FS    RQQP+P+T+S+QGLR LPG+KSSRS    K +RSVVVKAELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +THFEAGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_004149569.1 photosystem I reaction center subunit V, chloroplastic [Cucumis sativus]4.9e-7393.67Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MAAAASSSAVFAAPTFSATATRQQP+PTT+SFQGLRALP VKSSRS VA K RRS+ VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        LTHFEAGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_008449063.1 PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis melo]2.4e-7294.23Show/hide
Query:  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT
        AAASSSAVF APTFSATATRQQPSPTT+SFQGLRALP VKSSRS VA K RRS+ VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT
Subjt:  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT

Query:  HFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        HFEAGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  HFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_022934047.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata]8.0e-6887.34Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MAAAASSSAVFAA +FSA+  RQQP+P+T+S+QGLR LPG+KSSRS    K  RSVVVKAELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +THFEAGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_038903014.1 photosystem I reaction center subunit V, chloroplastic [Benincasa hispida]4.9e-7393.67Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MA AASSSA+FAAPTFSA ATRQQP+PT VSFQGLRALP VKSSR GVA K RRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        LTHFEAGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W3 PSI-G2.4e-7393.67Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MAAAASSSAVFAAPTFSATATRQQP+PTT+SFQGLRALP VKSSRS VA K RRS+ VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        LTHFEAGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A1S3BKK6 PSI-G1.2e-7294.23Show/hide
Query:  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT
        AAASSSAVF APTFSATATRQQPSPTT+SFQGLRALP VKSSRS VA K RRS+ VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT
Subjt:  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT

Query:  HFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        HFEAGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  HFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A5D3CPR0 PSI-G1.2e-7294.23Show/hide
Query:  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT
        AAASSSAVF APTFSATATRQQPSPTT+SFQGLRALP VKSSRS VA K RRS+ VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT
Subjt:  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT

Query:  HFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        HFEAGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  HFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1F1K2 PSI-G3.9e-6887.34Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MAAAASSSAVFAA +FSA+  RQQP+P+T+S+QGLR LPG+KSSRS    K  RSVVVKAELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +THFEAGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1L2L3 PSI-G8.7e-6886.71Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MAA ASSSAVFAA +FSA   RQQP+P+T+S+QGLR LPG+KSSRS  A K  RS+VVKAELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +THFEAGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

SwissProt top hitse value%identityAlignment
P12357 Photosystem I reaction center subunit V, chloroplastic7.8e-5067.88Show/hide
Query:  AAAASSSAVFAAPTFSATATRQQPSP----TTVSFQGLRAL----PGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSK
        AA AS S+   AP  S     QQ          SF GLR L        SS S   +  RRS+  +AEL+PSLVISLSTGLSLFLGRFVFFNFQREN++K
Subjt:  AAAASSSAVFAAPTFSATATRQQPSP----TTVSFQGLRAL----PGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSK

Query:  QVPEQNGLTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        QVPEQNG++HFEAGD RAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  QVPEQNGLTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

P14224 Photosystem I reaction center subunit V, chloroplastic6.3e-1540.16Show/hide
Query:  QGLRALPGVK-SSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENV---SKQVPEQNGLTHFEAGDVRAKEYISLLKSNDPVGFNI
        Q L + P ++ S+R      PR +VV KA L+P +VIS ST   L +GRFVF  +QR      S   P+  G T+F+  D++     ++  +NDP GFNI
Subjt:  QGLRALPGVK-SSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENV---SKQVPEQNGLTHFEAGDVRAKEYISLLKSNDPVGFNI

Query:  VDVLAWGSIGHIVAYYILATSS
        +DV  WG++GH V + +LA +S
Subjt:  VDVLAWGSIGHIVAYYILATSS

Q00327 Photosystem I reaction center subunit V, chloroplastic5.6e-4870.63Show/hide
Query:  ATATRQQPSPTTVSFQGLRALPGVKSSRS--GVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYI
        AT+T    SP  V+  GLR  P  +++ S  GV+   RRSV  +A L PS+VISLSTGLSL +GRFVFFNFQRENV+KQVPEQNG THFEAGD RAKE+ 
Subjt:  ATATRQQPSPTTVSFQGLRALPGVKSSRS--GVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYI

Query:  SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
         +LKSNDPVGFN+VDVLAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q9S7N7 Photosystem I reaction center subunit V, chloroplastic4.6e-5068.75Show/hide
Query:  AASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALP-GVKSS---RSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ
        A S+SA+ +  TFS   + +  +P ++SF GLR L  G  SS   +     +   S VV+AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQ
Subjt:  AASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALP-GVKSS---RSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ

Query:  NGLTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG THFEAGD RAKEY+SLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  NGLTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q9SPM4 Photosystem I reaction center subunit V, chloroplastic1.4e-1951.61Show/hide
Query:  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD
        N S +IS ST   L LGRFVF  FQR  VS+  +PEQNG+          + + S+LK+NDP GF +VDVLAWG++GH V ++ILAT++NGY+
Subjt:  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD

Arabidopsis top hitse value%identityAlignment
AT1G55670.1 photosystem I subunit G3.3e-5168.75Show/hide
Query:  AASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALP-GVKSS---RSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ
        A S+SA+ +  TFS   + +  +P ++SF GLR L  G  SS   +     +   S VV+AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQ
Subjt:  AASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALP-GVKSS---RSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ

Query:  NGLTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG THFEAGD RAKEY+SLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  NGLTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAAAATGGCACAAGGAATTTGGATCCAAGAATCTGTAATCTAGAACTAAATTATATGATCCTCATATCCTCCCTCAATTATCCACTCCAAATCTCTCCCACAAC
ATTATCACCACCAATGGCCGCCGCCGCCTCCTCCTCTGCCGTCTTCGCCGCCCCAACCTTCTCGGCCACCGCCACAAGGCAGCAGCCGAGCCCCACCACCGTATCATTCC
AAGGCCTCCGTGCACTCCCGGGCGTGAAGTCAAGCCGGTCGGGAGTCGCGGCAAAGCCCCGGAGATCGGTGGTGGTGAAGGCGGAGTTGAACCCATCTCTAGTTATAAGC
CTGAGCACTGGGCTGTCGTTGTTCTTAGGAAGGTTTGTTTTCTTCAATTTCCAAAGGGAGAATGTGAGCAAGCAAGTGCCAGAGCAAAATGGGCTGACCCATTTTGAGGC
TGGTGATGTGAGGGCTAAAGAATATATTAGCCTATTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCTATTGGCCATATTGTTGCTT
ATTATATCTTGGCTACTTCTAGCAATGGATATGATCCCAAGTTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAAAATGGCACAAGGAATTTGGATCCAAGAATCTGTAATCTAGAACTAAATTATATGATCCTCATATCCTCCCTCAATTATCCACTCCAAATCTCTCCCACAAC
ATTATCACCACCAATGGCCGCCGCCGCCTCCTCCTCTGCCGTCTTCGCCGCCCCAACCTTCTCGGCCACCGCCACAAGGCAGCAGCCGAGCCCCACCACCGTATCATTCC
AAGGCCTCCGTGCACTCCCGGGCGTGAAGTCAAGCCGGTCGGGAGTCGCGGCAAAGCCCCGGAGATCGGTGGTGGTGAAGGCGGAGTTGAACCCATCTCTAGTTATAAGC
CTGAGCACTGGGCTGTCGTTGTTCTTAGGAAGGTTTGTTTTCTTCAATTTCCAAAGGGAGAATGTGAGCAAGCAAGTGCCAGAGCAAAATGGGCTGACCCATTTTGAGGC
TGGTGATGTGAGGGCTAAAGAATATATTAGCCTATTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCTATTGGCCATATTGTTGCTT
ATTATATCTTGGCTACTTCTAGCAATGGATATGATCCCAAGTTCTTCTAG
Protein sequenceShow/hide protein sequence
MKKNGTRNLDPRICNLELNYMILISSLNYPLQISPTTLSPPMAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVIS
LSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF