; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G190430 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G190430
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionA2L_zn_ribbon domain-containing protein
Genome locationCicolChr10:5437041..5439564
RNA-Seq ExpressionCcUC10G190430
SyntenyCcUC10G190430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596745.1 hypothetical protein SDJN03_09925, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3057.05Show/hide
Query:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGASL----AADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLI
        MEAL  LPIS + F   PT N +LR  ++ PL  RS S+  RRRT  FAAIDGASL    AADP+QVEITWQI VGAI                      
Subjt:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGASL----AADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLI

Query:  GGLGFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC
                    AGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVL D DYFRC EC
Subjt:  GGLGFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC

KAG7028282.1 hypothetical protein SDJN02_09463, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-3057.05Show/hide
Query:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGASL----AADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLI
        MEAL  LPIS + F   PT N +LR  ++ PL  RS S+  RRRT  FAAIDGASL    AADP+QVEITWQI VGAI                      
Subjt:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGASL----AADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLI

Query:  GGLGFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC
                    AGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVL D DYFRC EC
Subjt:  GGLGFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC

XP_004149576.1 uncharacterized protein LOC101220311 [Cucumis sativus]3.9e-3058.17Show/hide
Query:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGAS-LAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGL
        MEAL    +SN L       +PTL  S T PLKPRS SI NRRRT  FAAIDGAS L AD +QV+ITWQIFVGAI                         
Subjt:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGAS-LAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGL

Query:  GFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC
                 AGVTPFVVAGIEFSKRI  QKRCKECGGSGLVLRDDDYFRC EC
Subjt:  GFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC

XP_008449071.1 PREDICTED: uncharacterized protein LOC103491051 [Cucumis melo]8.7e-3058.82Show/hide
Query:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGA-SLAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGL
        MEAL    ISN L       +PTLRRS     KPRS S+ NRRRT  FAAIDGA SLAAD +QVEITWQIFVGAI                         
Subjt:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGA-SLAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGL

Query:  GFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC
                 AGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVLRDDDYFRC +C
Subjt:  GFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC

XP_038903334.1 uncharacterized protein LOC120089955 [Benincasa hispida]1.9e-3763.16Show/hide
Query:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGASLAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGLG
        MEALP+ PISN LFP         RRS+T PLKPRS SIQNRRRTA +AAIDGASL AD  QVEITWQIFVGAI                          
Subjt:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGASLAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGLG

Query:  FWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC
                AGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVLRDDDYFRC EC
Subjt:  FWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC

TrEMBL top hitse value%identityAlignment
A0A0A0L7H1 Uncharacterized protein1.9e-3058.17Show/hide
Query:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGAS-LAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGL
        MEAL    +SN L       +PTL  S T PLKPRS SI NRRRT  FAAIDGAS L AD +QV+ITWQIFVGAI                         
Subjt:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGAS-LAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGL

Query:  GFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC
                 AGVTPFVVAGIEFSKRI  QKRCKECGGSGLVLRDDDYFRC EC
Subjt:  GFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC

A0A1S3BLU9 uncharacterized protein LOC1034910514.2e-3058.82Show/hide
Query:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGA-SLAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGL
        MEAL    ISN L       +PTLRRS     KPRS S+ NRRRT  FAAIDGA SLAAD +QVEITWQIFVGAI                         
Subjt:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGA-SLAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGL

Query:  GFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC
                 AGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVLRDDDYFRC +C
Subjt:  GFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC

A0A6J1DN65 uncharacterized protein LOC1110221356.8e-2047.4Show/hide
Query:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGAS--LAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGG
        MEAL   PISN+LF              T PL     SI NRR     AAI+ A+    ADPSQ++ITWQI VGAI                        
Subjt:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGAS--LAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGG

Query:  LGFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC
                  AGVTPFVVAGIEF+KRIVAQ+RC+ECGGSGLVL +DDYFRC +C
Subjt:  LGFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC

A0A6J1FBA7 uncharacterized protein LOC1114422629.4e-3056.77Show/hide
Query:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGASL---AADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIG
        MEAL  LPIS + F   PT N + R  +  PL  RS S+  RRRT  FAAIDGASL   AADP+QVEITWQI VGAI                       
Subjt:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGASL---AADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIG

Query:  GLGFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC
                   AGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVL D DYFRC EC
Subjt:  GLGFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC

A0A6J1L2M2 uncharacterized protein LOC1114985379.4e-3056.77Show/hide
Query:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGASL---AADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIG
        MEAL  LPIS + F   PT N + R  +  PL  RS S+  RRRT  FAAIDGASL   AADP+QVEITWQI VGAI                       
Subjt:  MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGASL---AADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIG

Query:  GLGFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC
                   AGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVL D DYFRC EC
Subjt:  GLGFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAEC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55570.1 unknown protein6.3e-1842.24Show/hide
Query:  ISIQNRRRTAIFAAIDGASLAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGLGFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGG
        +++ NRR     A  + A   A+  + EITWQI VG I                                  AG+ PFVVAG+EFSKRI+AQKRC+ECGG
Subjt:  ISIQNRRRTAIFAAIDGASLAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGLGFWCLMLVVAGVTPFVVAGIEFSKRIVAQKRCKECGG

Query:  SGLVLRDDDYFRCAEC
        +GLV RD  YFRC EC
Subjt:  SGLVLRDDDYFRCAEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTTTACCCGTACTCCCAATTTCTAACGCTCTCTTTCCATTAGCTCCCACTCCCAATCCGACTCTTCGTCGTTCCAATACTTCTCCCCTCAAACCGCGCTCAAT
TTCGATCCAAAATCGGAGACGAACAGCCATCTTTGCCGCCATTGACGGTGCTTCGCTTGCAGCCGACCCCTCTCAGGTCGAAATCACTTGGCAAATTTTCGTCGGAGCGA
TTGGTAATGGGAATGATTTTCGATTATTTGTGTGGTTTCTTTTGATTTTTTATTATCGAAATCTGATCGGTGGATTGGGATTTTGGTGTCTGATGTTGGTTGTAGCTGGA
GTGACTCCGTTTGTGGTGGCCGGAATCGAGTTCAGCAAGAGAATTGTGGCGCAGAAGAGATGTAAAGAATGTGGTGGTTCGGGGCTTGTTCTTAGAGATGATGACTACTT
TCGTTGCGCTGAATGTGATGTGAAAAATACACCCTTAACCAAGGATAGAGGTTTGTTTGAATTTGAATCATCATCTCGACATGTTGATGAACTGAAAAATAAAGTGGTTT
TTTGCCCTGGCAGTCATGGAGGCGATTCTTTTGGGGCTAAAGAAGACAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTTTACCCGTACTCCCAATTTCTAACGCTCTCTTTCCATTAGCTCCCACTCCCAATCCGACTCTTCGTCGTTCCAATACTTCTCCCCTCAAACCGCGCTCAAT
TTCGATCCAAAATCGGAGACGAACAGCCATCTTTGCCGCCATTGACGGTGCTTCGCTTGCAGCCGACCCCTCTCAGGTCGAAATCACTTGGCAAATTTTCGTCGGAGCGA
TTGGTAATGGGAATGATTTTCGATTATTTGTGTGGTTTCTTTTGATTTTTTATTATCGAAATCTGATCGGTGGATTGGGATTTTGGTGTCTGATGTTGGTTGTAGCTGGA
GTGACTCCGTTTGTGGTGGCCGGAATCGAGTTCAGCAAGAGAATTGTGGCGCAGAAGAGATGTAAAGAATGTGGTGGTTCGGGGCTTGTTCTTAGAGATGATGACTACTT
TCGTTGCGCTGAATGTGATGTGAAAAATACACCCTTAACCAAGGATAGAGGTTTGTTTGAATTTGAATCATCATCTCGACATGTTGATGAACTGAAAAATAAAGTGGTTT
TTTGCCCTGGCAGTCATGGAGGCGATTCTTTTGGGGCTAAAGAAGACAGTTAGCATGATATGTCTCTTTTGAAAGCTGTATAATTCCACATATTTCAAAGAAAGTGGTTC
AGGATCTTCTTTGTTGATTTCCAGGCAAGACGAGCAACAAAGGAAGCAATCCATTCGTTAAGTGTATGTATTTGAGGTTCAAGTATGTTGAATCAGAACTCAATTAATTT
GGATTAAATGGGATATTGTGAAACAAAATTTGTAGTCTCTGGCAAAAGTTTCCTTAGCATCATGTTTTGACGGCGAGAAGTTTCATGATATCAAGCATACTGAATGTGAC
ATGATTTCTGTTTAGAAAATCCCAAAACTTTAGTAAAATTATTTGGATCAATGAATTAGGTTTTGCTATTTGGTCAAGTAACTACACA
Protein sequenceShow/hide protein sequence
MEALPVLPISNALFPLAPTPNPTLRRSNTSPLKPRSISIQNRRRTAIFAAIDGASLAADPSQVEITWQIFVGAIGNGNDFRLFVWFLLIFYYRNLIGGLGFWCLMLVVAG
VTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCAECDVKNTPLTKDRGLFEFESSSRHVDELKNKVVFCPGSHGGDSFGAKEDS