; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G190670 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G190670
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionGlycine-rich cell wall structural protein-like
Genome locationCicolChr10:5740529..5740978
RNA-Seq ExpressionCcUC10G190670
SyntenyCcUC10G190670
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065824.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]4.1e-2485.26Show/hide
Query:  MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRP-----GFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGSGGGAGGGFGGGGGGGVGGG
        M SKIVFL+ LGAFL +TS ARKLSTAS QDEKFFHRP     G GGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVG G G GGGFGGGGGGG+GGG
Subjt:  MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRP-----GFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGSGGGAGGGFGGGGGGGVGGG

Query:  SGFGGGAGFGGGAGGGGGLGGGAGGGGGF--GGGGGLGGGAGGGFGNGAGVGGGFP
        SGFGGGAGFGGG+GGGGGLGGGAGGGGGF  GGGGGLGGGAGGGFG GAG GGG+P
Subjt:  SGFGGGAGFGGGAGGGGGLGGGAGGGGGF--GGGGGLGGGAGGGFGNGAGVGGGFP

KAA0065825.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]1.3e-2285Show/hide
Query:  MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRP-----GFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGV--GSGGGAGGGFGGGGGGGVG
        M SKIVFL+ LGAFL TTS ARKLSTAS QDEKFFHRP     G GGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGV  G+GGG GGGFGGGGGGG+G
Subjt:  MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRP-----GFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGV--GSGGGAGGGFGGGGGGGVG

Query:  GGSGFGGGAGFGGGAGGGGGL--GGGAGGGGGF--GGGGGLGGGAGGGFGNGAGVGGGFP
        GGSGFGGGAGFGGG+GGGGGL  GGGAGGGGGF  GGGGGLGGGAGGGFG+GAG GGGFP
Subjt:  GGSGFGGGAGFGGGAGGGGGL--GGGAGGGGGF--GGGGGLGGGAGGGFGNGAGVGGGFP

KAG5002003.1 hypothetical protein JHK87_023075 [Glycine soja]9.4e-1373.17Show/hide
Query:  MTSKIVFLLLLGAFLCTTSAARKLST--ASLQDEK-FFHRPGFGGGGGGGFGGGGGGGLGGGSGGGFGG------GSGFGGGVGSGGGAGGGFGG-----
        M S+++ L LLGA +CT   ARKL +   S +DEK FFHRPGFGGGGGGGFGGGGGGGLGGG+GGG GG      G+G G G G+GGGAGGGFGG     
Subjt:  MTSKIVFLLLLGAFLCTTSAARKLST--ASLQDEK-FFHRPGFGGGGGGGFGGGGGGGLGGGSGGGFGG------GSGFGGGVGSGGGAGGGFGG-----

Query:  -GGGGGVGGGSGFGGGAGFGGGAGGGGGLGGGAGGGGGFGGGGGLGGGAGGGFGNGAGVGGGFP
         GGGGGVGGGSGFGGGAGFGGGAG GGGLGGG GGG G GGGGGLGGGAGGGFG GAG GGGFP
Subjt:  -GGGGGVGGGSGFGGGAGFGGGAGGGGGLGGGAGGGGGFGGGGGLGGGAGGGFGNGAGVGGGFP

KAG5027289.1 hypothetical protein JHK86_023203 [Glycine max]1.8e-1173.17Show/hide
Query:  MTSKIVFLLLLGAFLCTTSAARKLST--ASLQDEK-FFHRPGFGGGGGGGFGGGGGGGLGGGSGGGFGGGS----GFGGGVGSGGGAGGGFGG------G
        M S+++ L LLGA +CT   ARKL +   S +DEK FFHRPGFGGGGGGGFGGGGGGGLGGG+GGG GGG+    G G G G+GGGAGGGFGG      G
Subjt:  MTSKIVFLLLLGAFLCTTSAARKLST--ASLQDEK-FFHRPGFGGGGGGGFGGGGGGGLGGGSGGGFGGGS----GFGGGVGSGGGAGGGFGG------G

Query:  GGGGVGGGSGFGGGAGFGGGAGGGGGLGGGAGGGGGFGGGGGLGGGAGGGFGN--GAGVGGGFP
        GGGGVGGGSGFGGGAGFGGGAG GGGLGGG GGG G GGGGGLGGGAGGGFG   GAG GGGFP
Subjt:  GGGGVGGGSGFGGGAGFGGGAGGGGGLGGGAGGGGGFGGGGGLGGGAGGGFGN--GAGVGGGFP

XP_011650511.1 glycine-rich cell wall structural protein-like [Cucumis sativus]1.6e-2083.54Show/hide
Query:  MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRP-----GFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGV--GSGGGAGGGFGGGGGGGVG
        M SKIVFL+ LGAFL +TS ARKLSTAS QDEKFF RP     G GGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGV  G+GGG GGGFGGGGGGG+G
Subjt:  MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRP-----GFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGV--GSGGGAGGGFGGGGGGGVG

Query:  GGSGFGGGAGFGGGAGGGGGLGGGAGGGGGF--GGGGGLGGGAGGGFGNGAGVGGGFP
        GGSGFGGGAGFGGG+GGG G GGGAGGGGGF  GGGGGLGGGAGGGFG GAG GGGFP
Subjt:  GGSGFGGGAGFGGGAGGGGGLGGGAGGGGGF--GGGGGLGGGAGGGFGNGAGVGGGFP

TrEMBL top hitse value%identityAlignment
A0A0A0L2A7 Uncharacterized protein1.2e-1373.49Show/hide
Query:  MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRP-----GFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGV--GSGGGAGGGFGGGGGGGVG
        M SKIVFL+ LGAFL +TS ARKLSTAS QDEKFF RP     G GGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGV  G+GGG GGGFGGGGGGG+G
Subjt:  MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRP-----GFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGV--GSGGGAGGGFGGGGGGGVG

Query:  GGSGFGGGAGFGGGAG------------GGGGLGGGAGGGGGFGGGGGLGGGAGGGFGNGAGVGGG
        GG+    G GFGGGAG            GGGGLGGG GGG G GGGGGLGGG+GGGFG G+G GGG
Subjt:  GGSGFGGGAGFGGGAG------------GGGGLGGGAGGGGGFGGGGGLGGGAGGGFGNGAGVGGG

A0A5A7VJD1 Glycine-rich cell wall structural protein-like6.4e-2385Show/hide
Query:  MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRP-----GFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGV--GSGGGAGGGFGGGGGGGVG
        M SKIVFL+ LGAFL TTS ARKLSTAS QDEKFFHRP     G GGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGV  G+GGG GGGFGGGGGGG+G
Subjt:  MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRP-----GFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGV--GSGGGAGGGFGGGGGGGVG

Query:  GGSGFGGGAGFGGGAGGGGGL--GGGAGGGGGF--GGGGGLGGGAGGGFGNGAGVGGGFP
        GGSGFGGGAGFGGG+GGGGGL  GGGAGGGGGF  GGGGGLGGGAGGGFG+GAG GGGFP
Subjt:  GGSGFGGGAGFGGGAGGGGGL--GGGAGGGGGF--GGGGGLGGGAGGGFGNGAGVGGGFP

A0A5D3BB90 Glycine-rich cell wall structural protein-like2.0e-2485.26Show/hide
Query:  MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRP-----GFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGSGGGAGGGFGGGGGGGVGGG
        M SKIVFL+ LGAFL +TS ARKLSTAS QDEKFFHRP     G GGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVG G G GGGFGGGGGGG+GGG
Subjt:  MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRP-----GFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGSGGGAGGGFGGGGGGGVGGG

Query:  SGFGGGAGFGGGAGGGGGLGGGAGGGGGF--GGGGGLGGGAGGGFGNGAGVGGGFP
        SGFGGGAGFGGG+GGGGGLGGGAGGGGGF  GGGGGLGGGAGGGFG GAG GGG+P
Subjt:  SGFGGGAGFGGGAGGGGGLGGGAGGGGGF--GGGGGLGGGAGGGFGNGAGVGGGFP

B9SVA0 GRP3S, putative5.6e-1172.73Show/hide
Query:  MTSKIVFLLLLGAFLCTTSAARKL--STASLQDEKFFHRP----GFGGGGGGGFGGGGGGGLGG----GSGGGFGGGS--GFGGGVGSGGGAGGGFGGGG
        M SK+  +LLLGAF+CT++AAR L    AS +DEKFF RP    G GGGGGGGFGGGGGGGLGG    G G GFGGG+  G GGG+G G G GGGFGGGG
Subjt:  MTSKIVFLLLLGAFLCTTSAARKL--STASLQDEKFFHRP----GFGGGGGGGFGGGGGGGLGG----GSGGGFGGGS--GFGGGVGSGGGAGGGFGGGG

Query:  GGGVGGGSGFGGGA--GFGGGAGGGGGLGGGAGGGGGF--GGGGGLGGGAGGGFGNGAGVGGGFP
        GGG+GGGSGFGGGA  GFGGGAG GGGLGGGAGGGGGF  GGGGGLGGGAGGGFG G G+GGG P
Subjt:  GGGVGGGSGFGGGA--GFGGGAGGGGGLGGGAGGGGGF--GGGGGLGGGAGGGFGNGAGVGGGFP

K7LA64 Uncharacterized protein1.6e-1069.77Show/hide
Query:  MTSKIVFLLLLGAFLCTTSAARKLST--ASLQDEK-FFHRPGFGGGGGGGFGGGG--------GGGLGGGSGGGFGGGSGFGGGVGSGGGAGGGFGGGG-
        M S+ + L LLGA +CT   ARKL +   S +DEK FFHRPGFGGGGGGGFGGGG        GGGLGGG+GGGFG G+G G G G+GGGAGGGFGGGG 
Subjt:  MTSKIVFLLLLGAFLCTTSAARKLST--ASLQDEK-FFHRPGFGGGGGGGFGGGG--------GGGLGGGSGGGFGGGSGFGGGVGSGGGAGGGFGGGG-

Query:  -----GGGVGGGSGFGGGAGFGGGAGGGGGLGGGAGGGGGFGGGGGLGGGAGGGFGN------GAGVGGGFP
             GGGVGGGSGFGGGAGFGGGAG GGGLGGG GGG G GGGGGLGGGAGGGFG       GAG GGGFP
Subjt:  -----GGGVGGGSGFGGGAGFGGGAGGGGGLGGGAGGGGGFGGGGGLGGGAGGGFGN------GAGVGGGFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCCAAGATTGTCTTTCTTCTGCTTCTTGGTGCTTTTCTCTGCACCACTTCTGCGGCTCGTAAGCTGAGTACTGCCTCTCTTCAAGATGAAAAGTTCTTCCACCG
TCCTGGATTTGGTGGCGGAGGTGGTGGAGGGTTCGGTGGAGGCGGAGGCGGAGGGTTAGGCGGAGGTTCGGGAGGTGGTTTTGGTGGAGGATCTGGATTTGGCGGCGGTG
TTGGTAGTGGTGGGGGTGCTGGAGGAGGGTTTGGTGGAGGAGGAGGTGGTGGAGTAGGCGGAGGGAGTGGTTTTGGAGGTGGAGCAGGGTTTGGAGGAGGGGCTGGTGGA
GGAGGAGGACTTGGTGGTGGCGCTGGCGGTGGAGGAGGGTTCGGTGGCGGGGGTGGACTAGGGGGCGGAGCAGGCGGAGGGTTCGGCAATGGCGCCGGTGTAGGAGGTGG
ATTCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCCAAGATTGTCTTTCTTCTGCTTCTTGGTGCTTTTCTCTGCACCACTTCTGCGGCTCGTAAGCTGAGTACTGCCTCTCTTCAAGATGAAAAGTTCTTCCACCG
TCCTGGATTTGGTGGCGGAGGTGGTGGAGGGTTCGGTGGAGGCGGAGGCGGAGGGTTAGGCGGAGGTTCGGGAGGTGGTTTTGGTGGAGGATCTGGATTTGGCGGCGGTG
TTGGTAGTGGTGGGGGTGCTGGAGGAGGGTTTGGTGGAGGAGGAGGTGGTGGAGTAGGCGGAGGGAGTGGTTTTGGAGGTGGAGCAGGGTTTGGAGGAGGGGCTGGTGGA
GGAGGAGGACTTGGTGGTGGCGCTGGCGGTGGAGGAGGGTTCGGTGGCGGGGGTGGACTAGGGGGCGGAGCAGGCGGAGGGTTCGGCAATGGCGCCGGTGTAGGAGGTGG
ATTCCCTTGA
Protein sequenceShow/hide protein sequence
MTSKIVFLLLLGAFLCTTSAARKLSTASLQDEKFFHRPGFGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGVGSGGGAGGGFGGGGGGGVGGGSGFGGGAGFGGGAGG
GGGLGGGAGGGGGFGGGGGLGGGAGGGFGNGAGVGGGFP