; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC10G190890 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G190890
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSmall ubiquitin-related modifier
Genome locationCicolChr10:6047528..6050459
RNA-Seq ExpressionCcUC10G190890
SyntenyCcUC10G190890
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149348.1 small ubiquitin-related modifier 1 [Cucumis sativus]3.6e-4279.34Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGGG
        EELEMEDGDEIDAMLHQTGGG
Subjt:  EELEMEDGDEIDAMLHQTGGG

XP_018812104.1 small ubiquitin-related modifier 1 [Juglans regia]1.2e-4077.5Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGG
        +ELEMEDGDEIDAMLHQTGG
Subjt:  EELEMEDGDEIDAMLHQTGG

XP_022158763.1 small ubiquitin-related modifier 1-like [Momordica charantia]2.3e-4177.69Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGGG
        EELEMEDGDEIDAMLHQTGGG
Subjt:  EELEMEDGDEIDAMLHQTGGG

XP_023895256.1 small ubiquitin-related modifier 1 [Quercus suber]2.6e-4076.67Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVD++SIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGG
        +ELEMEDGDEIDAMLHQTGG
Subjt:  EELEMEDGDEIDAMLHQTGG

XP_038905908.1 small ubiquitin-related modifier 1 [Benincasa hispida]3.6e-4279.34Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGGG
        EELEMEDGDEIDAMLHQTGGG
Subjt:  EELEMEDGDEIDAMLHQTGGG

TrEMBL top hitse value%identityAlignment
A0A0A0L2Y3 Small ubiquitin-related modifier1.7e-4279.34Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGGG
        EELEMEDGDEIDAMLHQTGGG
Subjt:  EELEMEDGDEIDAMLHQTGGG

A0A1S3BKS1 Small ubiquitin-related modifier1.7e-4279.34Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGGG
        EELEMEDGDEIDAMLHQTGGG
Subjt:  EELEMEDGDEIDAMLHQTGGG

A0A2I4DY72 Small ubiquitin-related modifier5.6e-4177.5Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGG
        +ELEMEDGDEIDAMLHQTGG
Subjt:  EELEMEDGDEIDAMLHQTGG

A0A6A1VQH5 Small ubiquitin-related modifier5.6e-4177.5Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGG
        +ELEMEDGDEIDAMLHQTGG
Subjt:  EELEMEDGDEIDAMLHQTGG

A0A6J1DX09 Small ubiquitin-related modifier1.1e-4177.69Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP
        MSGVTNQEEDKKPTDQSAHINLKVKGQ                         DGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTP

Query:  EELEMEDGDEIDAMLHQTGGG
        EELEMEDGDEIDAMLHQTGGG
Subjt:  EELEMEDGDEIDAMLHQTGGG

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt32.0e-1944.54Show/hide
Query:  SGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPE
        +G T+Q++ K  T+   HINLKV GQ                         D NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG R+R +QTP 
Subjt:  SGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPE

Query:  ELEMEDGDEIDAMLHQTGG
        EL+MEDGD+I+A+L Q GG
Subjt:  ELEMEDGDEIDAMLHQTGG

P55852 Small ubiquitin-related modifier 11.9e-3873.04Show/hide
Query:  NQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEM
        NQEEDKKP D  AHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTP+EL+M
Subjt:  NQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEM

Query:  EDGDEIDAMLHQTGG
        EDGDEIDAMLHQTGG
Subjt:  EDGDEIDAMLHQTGG

P55857 Small ubiquitin-related modifier 11.3e-3468.97Show/hide
Query:  EEDKKPT---DQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELE
        EEDKKP       AHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLFDGRRLR EQTP+ELE
Subjt:  EEDKKPT---DQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELE

Query:  MEDGDEIDAMLHQTGG
        MEDGDEIDAMLHQTGG
Subjt:  MEDGDEIDAMLHQTGG

Q9FLP5 Small ubiquitin-related modifier 36.0e-1642.11Show/hide
Query:  EDKKPTD--QSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEME
        +D KP D  Q AH+ LKVK Q                         DG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TP+EL+ME
Subjt:  EDKKPTD--QSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEME

Query:  DGDEIDAMLHQTGG
        DGD IDA    +GG
Subjt:  DGDEIDAMLHQTGG

Q9FLP6 Small ubiquitin-related modifier 29.5e-3874.56Show/hide
Query:  EEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMED
        EEDKKP DQ AHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMED
Subjt:  EEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMED

Query:  GDEIDAMLHQTGGG
        GDEIDAMLHQTGGG
Subjt:  GDEIDAMLHQTGGG

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 11.4e-3973.04Show/hide
Query:  NQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEM
        NQEEDKKP D  AHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTP+EL+M
Subjt:  NQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEM

Query:  EDGDEIDAMLHQTGG
        EDGDEIDAMLHQTGG
Subjt:  EDGDEIDAMLHQTGG

AT5G55160.1 small ubiquitin-like modifier 26.8e-3974.56Show/hide
Query:  EEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMED
        EEDKKP DQ AHINLKVKGQ                         DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMED
Subjt:  EEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMED

Query:  GDEIDAMLHQTGGG
        GDEIDAMLHQTGGG
Subjt:  GDEIDAMLHQTGGG

AT5G55160.2 small ubiquitin-like modifier 22.1e-4076.32Show/hide
Query:  EEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMED
        EEDKKP DQ AHINLKVKGQ  +F ++  W            +  DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMED
Subjt:  EEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMED

Query:  GDEIDAMLHQTGGG
        GDEIDAMLHQTGGG
Subjt:  GDEIDAMLHQTGGG

AT5G55170.1 small ubiquitin-like modifier 34.3e-1742.11Show/hide
Query:  EDKKPTD--QSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEME
        +D KP D  Q AH+ LKVK Q                         DG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TP+EL+ME
Subjt:  EDKKPTD--QSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEME

Query:  DGDEIDAMLHQTGG
        DGD IDA    +GG
Subjt:  DGDEIDAMLHQTGG

AT5G55856.1 Ubiquitin-like superfamily protein2.8e-1640.54Show/hide
Query:  DKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGD
        DKKP   S+HI +KVK Q                         D   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R++  QTP EL +ED D
Subjt:  DKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGD

Query:  EIDAMLHQTGG
        EI+A   Q GG
Subjt:  EIDAMLHQTGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGCGTTACCAATCAAGAAGAGGACAAGAAGCCCACCGATCAGTCGGCTCATATCAACCTCAAAGTCAAGGGCCAGATGGTCTCTTTTAGAATAATTTTGTATTG
GGGAGAAGCAGGAAAATGCAGCATTGCTTTATCTTGCTTGGCCCTGGATGGAAATGAAGTTTTCTTCCGGATCAAAAGGAGTACCCAACTGAAGAAGCTAATGAATGCTT
ACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGTGCAGAGCAGACTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAG
ATTGATGCAATGCTTCACCAAACTGGAGGTGGAGAGATCCACTGCCCTGATGTTGTAAAAAGTCCCAAAATTATGAAGGAAACGAAGAAGCTTTTGCTATTGGTCAGTTG
TTATCTGTCTCATAATCAGCCTAAAGATGGTATTACAATGCTTTAG
mRNA sequenceShow/hide mRNA sequence
TAAATACAAGGCAAAACATTTTAAACTGCGTCGTTTCTACGGCAACTTAATTCCAATCATTCCCGTATTTGTGTACGTTGGATCAATGAATCCAACAACGCATCCCGACC
GTCCATTTAGAACCTCAAAAATTCCACCCACTTTCCCTTGAAGACTCAGCGTCGCATATAGTGCAGAACCAGGCGAAGACCACTTCGAGATTTTCCGAACCCTTTTTCAT
TCTTCGCTGGGAAATCTGTAAGATCAAACCCCAGAAATTTTCCTTCTTCCAACTTCAAAATAATGTCGGGCGTTACCAATCAAGAAGAGGACAAGAAGCCCACCGATCAG
TCGGCTCATATCAACCTCAAAGTCAAGGGCCAGATGGTCTCTTTTAGAATAATTTTGTATTGGGGAGAAGCAGGAAAATGCAGCATTGCTTTATCTTGCTTGGCCCTGGA
TGGAAATGAAGTTTTCTTCCGGATCAAAAGGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTG
ACGGCCGCCGACTGCGTGCAGAGCAGACTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATTGATGCAATGCTTCACCAAACTGGAGGTGGAGAGATCCACTGCCCT
GATGTTGTAAAAAGTCCCAAAATTATGAAGGAAACGAAGAAGCTTTTGCTATTGGTCAGTTGTTATCTGTCTCATAATCAGCCTAAAGATGGTATTACAATGCTTTAGTG
AATAAACAACTGAAAAACATTGATCAAGAAAGCACTTTGCTTTGCTATTTGAATTATGAAATGATTCCATATCTCTGCAAAAGGCAATACTCTTCCTTTAGAGGTAGTTT
GTTTGCTGGAGAAGCACAAGAATCTTCTTTGACATGTGAAACTCTTGTTTGTTTGAAGATTTTGAGGTTGATAGTACTCGAACATCTAACTTTAGTACTCTTCTGGTGTA
TGAGATAATTTGGAGGTGAGAGGGGGATCTGATGGAGGGAATTGTGAGAATTGAGAGAGGTGGGGGATTAAGGGGATGATACAAAACTAATGTAATTGACACCAGCAATT
GTGGAAATAGACTAATTGAATGCTTCTAACATTCAAGGACATCATTTGAAGAAAACACTCAATTCTGTTCT
Protein sequenceShow/hide protein sequence
MSGVTNQEEDKKPTDQSAHINLKVKGQMVSFRIILYWGEAGKCSIALSCLALDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDE
IDAMLHQTGGGEIHCPDVVKSPKIMKETKKLLLLVSCYLSHNQPKDGITML