CuGenDBv2

Gene ID	CcUC10G191110
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome location	CicolChr10:6331435..6334989
RNA-Seq Expression	CcUC10G191110
Synteny	CcUC10G191110
Gene Ontology terms	GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0070469 - respirasome (cellular component)
InterPro domains	IPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033972.1 NDUFA12 domain-containing protein [Cucumis melo var. makuwa]

6.9e-90

92.9

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Query:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVA LKKEEMER
Subjt:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER

Query:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT
        NSKEG LRKIISTGQ  GPDLKSFIRQ PTGSEGAQ+VEGL TRD+LRN NEKE V+EKPIPESSEPVGSG TFRPGTWQPPT
Subjt:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT

XP_004152928.1 uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus]

2.0e-89

92.35

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Query:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER
        MSKLFGKIA+FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVA LKKEEMER
Subjt:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER

Query:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT
        NSKEGNLRKIISTGQ  GPDLKSFIRQ PTGSEGAQ+VEGL TRDSLRN NEKEA +EKPIPESSEPVGSG TF+PGTWQPPT
Subjt:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT

XP_022155795.1 uncharacterized protein LOC111022834 isoform X1 [Momordica charantia]

3.3e-84

86.34

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Query:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER
        MSKLFGKIASFFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNV  LKK+EMER
Subjt:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER

Query:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT
        NS+EGNLRK+IS  Q AGPDL SFIRQFPTGSEGAQ+ EG   R+S RN  EKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT
Subjt:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT

XP_038903173.1 uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida]

3.3e-92

93.16

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Query:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVA LKKEEMER
Subjt:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER

Query:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPE-------SSEPVGSGQTFRPGTWQPPT
        NSKEGNLRKIISTGQ AGPDLKSFIRQFPTGSEGAQ+VEGLTTRDSLRN NEKEAVKEKPIP+       SSEPVGSGQTFRPGTWQPPT
Subjt:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPE-------SSEPVGSGQTFRPGTWQPPT

XP_038903174.1 uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida]

1.2e-94

97.27

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Query:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVA LKKEEMER
Subjt:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER

Query:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT
        NSKEGNLRKIISTGQ AGPDLKSFIRQFPTGSEGAQ+VEGLTTRDSLRN NEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT
Subjt:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L526 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

9.7e-90

92.35

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Query:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER
        MSKLFGKIA+FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVA LKKEEMER
Subjt:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER

Query:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT
        NSKEGNLRKIISTGQ  GPDLKSFIRQ PTGSEGAQ+VEGL TRDSLRN NEKEA +EKPIPESSEPVGSG TF+PGTWQPPT
Subjt:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT

A0A5A7SS01 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

3.3e-90

92.9

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Query:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER
        MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVA LKKEEMER
Subjt:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER

Query:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT
        NSKEG LRKIISTGQ  GPDLKSFIRQ PTGSEGAQ+VEGL TRD+LRN NEKE V+EKPIPESSEPVGSG TFRPGTWQPPT
Subjt:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT

A0A6J1DNE9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

1.6e-84

86.34

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Query:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER
        MSKLFGKIASFFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNV  LKK+EMER
Subjt:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER

Query:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT
        NS+EGNLRK+IS  Q AGPDL SFIRQFPTGSEGAQ+ EG   R+S RN  EKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT
Subjt:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT

A0A6J1JSL7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

4.4e-82

85.79

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Query:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER
        MSKLF KIA FF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVA LKKEEMER
Subjt:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER

Query:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT
         SKE NLRK++ST    GP+LKSFIRQFPTGSEGAQ+ EG   +DSLRN  E EA KEKPIPESSEP+GSGQTFRPGTWQPPT
Subjt:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT

A0A6J1JVV8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

8.8e-83

86.34

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Query:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER
        MSKLF KIA FF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVA LKKEEMER
Subjt:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER

Query:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT
         SKE NLRK++ST   AGP+LKSFIRQFPTGSEGAQ+ EG   +DSLRN  E EA KEKPIPESSEP+GSGQTFRPGTWQPPT
Subjt:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT

SwissProt top hits

e value

%identity

Alignment

Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

7.1e-05

44.07

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Query:  TLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPT
        TLVGVDK GNRY+  ++EI G     RWV +     +DPT+IP E+  W++    K P+
Subjt:  TLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPT

Q59J78 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2

3.2e-05

25.14

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Query:  RTLVGVDKAGNRYFFVKEEID---GIMKEKRWVVFKG----EDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVR-QNVAFLKKEEMERNSKEGN
        R  VG D  GN+Y++V E  +     ++EKR V        + +   IP EW  W+   RK  PT EE+++ E  RE ++ ++  F +K+++ + + E  
Subjt:  RTLVGVDKAGNRYFFVKEEID---GIMKEKRWVVFKG----EDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVR-QNVAFLKKEEMERNSKEGN

Query:  LRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQP
        L    +T          F R+ P                                  S  P  +G+TF+PG+W P
Subjt:  LRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQP

Arabidopsis top hits

e value

%identity

Alignment

AT4G26965.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit

6.9e-56

59.46

Show/hide

Query:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER
        MS+L+ + A  FS+++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM+ELEARRERV+ NVA LKKEE E+
Subjt:  MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMER

Query:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLR-NPNEKEAVK-EKPIPESSEPVGSGQTFRPGTWQPPT
         ++ G  RK I+ G+  GPDL SF+RQFP  S+G +  E     D  R   +E E V  E P P+++EP GSG +FRPGTWQPP+
Subjt:  NSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLR-NPNEKEAVK-EKPIPESSEPVGSGQTFRPGTWQPPT

AT4G26965.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit

6.1e-44

62.16

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Query:  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMERNSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQN
        MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM+ELEARRERV+ NVA LKKEE E+ ++ G  RK I+ G+  GPDL SF+RQFP  S+G + 
Subjt:  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMERNSKEGNLRKIISTGQAAGPDLKSFIRQFPTGSEGAQN

Query:  VEGLTTRDSLR-NPNEKEAVK-EKPIPESSEPVGSGQTFRPGTWQPPT
         E     D  R   +E E V  E P P+++EP GSG +FRPGTWQPP+
Subjt:  VEGLTTRDSLR-NPNEKEAVK-EKPIPESSEPVGSGQTFRPGTWQPPT

Sequences

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CDS sequence

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ATGTCGAAACTTTTTGGGAAAATTGCCAGTTTCTTCAGCAATCGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTTGTAAAAGAAGAAATCGATGGAAT
AATGAAAGAGAAGAGATGGGTGGTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTAGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAG
AGGAAATGATGGAGCTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTTTTCTCAAGAAAGAAGAGATGGAGAGAAACTCTAAAGAAGGCAATTTACGGAAAATC
ATCAGCACTGGTCAAGCTGCAGGTCCTGACTTGAAAAGCTTTATTCGACAGTTCCCAACTGGTTCAGAAGGTGCCCAAAATGTGGAAGGATTGACTACAAGGGATAGCCT
AAGGAACCCAAATGAAAAGGAGGCAGTTAAAGAGAAACCAATTCCAGAGTCCTCCGAGCCCGTCGGGTCTGGCCAAACATTTAGACCAGGAACATGGCAGCCACCAACAT
GA

mRNA sequence

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Protein sequence

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MSKLFGKIASFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVAFLKKEEMERNSKEGNLRKI
ISTGQAAGPDLKSFIRQFPTGSEGAQNVEGLTTRDSLRNPNEKEAVKEKPIPESSEPVGSGQTFRPGTWQPPT

CcUC10G191110 (gene) of Watermelon (PI 537277) v1 genome