CuGenDBv2

Gene ID	CcUC10G191400
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Cytochrome b
Genome location	CicolChr10:6690354..6702991
RNA-Seq Expression	CcUC10G191400
Synteny	CcUC10G191400
Gene Ontology terms	GO:0022904 - respiratory electron transport chain (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0045275 - respiratory chain complex III (cellular component) GO:0008121 - ubiquinol-cytochrome-c reductase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR005798 - Cytochrome b/b6, C-terminal IPR027387 - Cytochrome b/b6-like domain superfamily IPR036150 - Cytochrome b/b6, C-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AHF22750.1 cytochrome b, partial [Fragaria chiloensis]

1.3e-48

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

AHF22752.1 cytochrome b, partial [Fragaria vesca subsp. vesca]

1.3e-48

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

AHF22753.1 cytochrome B, partial [Fragaria vesca subsp. bracteata]

1.3e-48

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

AHF22754.1 cytochrome b, partial [Fragaria vesca subsp. bracteata]

1.3e-48

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

AMC32873.1 cytochrome b, partial [Croton texensis]

1.3e-48

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

TrEMBL top hits

e value

%identity

Alignment

A0A0B4L0J7 Cytochrome b (Fragment)

6.5e-49

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

A0A0B4L0L5 Cytochrome b (Fragment)

6.5e-49

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

A0A0B4L136 Cytochrome b (Fragment)

6.5e-49

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

A0A0B4L2H4 Cytochrome b (Fragment)

6.5e-49

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

A0A1C9I9P3 Cytochrome b

6.5e-49

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

SwissProt top hits

e value

%identity

Alignment

P05718 Cytochrome b

1.1e-50

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+D+ISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDK+GGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

P09843 Cytochrome b

3.1e-48

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPM TPPHIVPEWYFLPI+AILRSIPDKAGGVAAIA VFICLLALPFFK +
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

P29757 Cytochrome b

6.9e-48

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKI+FYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPM TPPHIVPEWYFLPI+AILRSIPDK GGVAAIA VFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

P42792 Cytochrome b

2.4e-48

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKI+FYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPM TPPHIVPEWYFLPI+AILRSIPDKAGGVAAIA VFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

Q9ZZT8 Cytochrome b

1.1e-50

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+D+ISFYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDK+GGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

Arabidopsis top hits

e value

%identity

Alignment

AT2G07727.1 Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal

2.3e-51

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKI+FYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPM TPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

ATCG00730.1 photosynthetic electron transfer D

5.5e-08

40.62

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Query:  PNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        P+++G      PA+P  TP  I+PEWYF P+  ILR++P+K  GV  +  V   LL +PF +++
Subjt:  PNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

ATMG00220.1 apocytochrome b

2.3e-51

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Query:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI
        V SE+DKI+FYPYFYVKDLVGWVAF IFFS+WIFYAPNVLGHPDNYIPANPM TPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKS+
Subjt:  VGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSI

Sequences

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CDS sequence

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ATGATTAATTCTTTACATTCAGAGATTGATAAAATTTCTTTTTACCCTTATTTTTATGTAAAGGATCTAGTGGGTTCAGAGATTGATAAAATTTCTTTTTACCCTTATTT
TTATGTAAAGGATCTAGTGGGTTGGGTAGCTTTTCCTATCTTTTTTTCACTTTGGATTTTTTATGCTCCTAATGTTTTGGGGCATCCCGACAATTATATACCTGCTAATC
CGATGCCCACCCCGCCTCATATTGTGCCGGAATGGTATTTCCTACCGATCCATGCCATTCTTCGTAGTATACCTGACAAAGCGGGAGGTGTAGCCGCAATAGCACCAGTT
TTTATATGTCTGTTGGCTTTACCTTTTTTTAAAAGTATATTGGGGTTGGACAAAGAAAGAGAGGAGGAAGAGATGGGAAGGGAGAGAATGAACATGGAATGA

mRNA sequence

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Protein sequence

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MINSLHSEIDKISFYPYFYVKDLVGSEIDKISFYPYFYVKDLVGWVAFPIFFSLWIFYAPNVLGHPDNYIPANPMPTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPV
FICLLALPFFKSILGLDKEREEEEMGRERMNME

CcUC10G191400 (gene) of Watermelon (PI 537277) v1 genome