CuGenDBv2

Gene ID	CcUC10G191520
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Genome location	CicolChr10:6962600..6963530
RNA-Seq Expression	CcUC10G191520
Synteny	CcUC10G191520
Gene Ontology terms	GO:0010258 - NADH dehydrogenase complex (plastoquinone) assembly (biological process) GO:0009570 - chloroplast stroma (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025435.1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 [Cucumis melo var. makuwa]

2.3e-93

91.54

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Query:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW
        MASSHLHFLSTPNPIL+LP S P FT PLQ TSKRDLSIK +SQDSESD NFPSPDP FSALNQPE+FPIEKRRRSEI+R+R+PTT+IAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVK+ETLSER+GQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK

Query:  A
        A
Subjt:  A

XP_004152910.2 uncharacterized protein LOC101210146 [Cucumis sativus]

7.3e-92

89.55

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Query:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW
        MASSHLHFLSTPNPIL+LP S P FT PLQ TSKRDLSIK +SQDSESD NFPSPDPNF ALNQPE+FPIEKRRRS+I+R+R+P+T+IAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK
        KRTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVK+ETLSER+GQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK

Query:  A
        A
Subjt:  A

XP_008452345.1 PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo]

4.6e-94

92.04

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Query:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW
        MASSHLHFLSTPNPIL+LP S P FT PLQ TSKRDLSIK +SQDSESD NFPSPDPNFSALNQPE+FPIEKRRRSEI+R+R+PTT+IAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVK+ETLSER+GQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK

Query:  A
        A
Subjt:  A

XP_038903492.1 uncharacterized protein LOC120090072 isoform X1 [Benincasa hispida]

2.3e-93

91.18

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Query:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW
        MASSHLHFLSTPNPILILP SQP FT PLQ TSKR+ SIK +SQ+SESD NFPSPDPNFSALNQPESFPIEKRRRSEIVR+RRPTTDIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLM+REFGSTELLAKVGEIVAERAREEAEIL DDGKVEERMVTELFRVLKLMEMD AMVKAAVK+ETLSER+GQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK

Query:  ASLD
        A L+
Subjt:  ASLD

XP_038903493.1 uncharacterized protein LOC120090072 isoform X2 [Benincasa hispida]

8.6e-93

92.04

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Query:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW
        MASSHLHFLSTPNPILILP SQP FT PLQ TSKR+ SIK +SQ+SESD NFPSPDPNFSALNQPESFPIEKRRRSEIVR+RRPTTDIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLM+REFGSTELLAKVGEIVAERAREEAEIL DDGKVEERMVTELFRVLKLMEMD AMVKAAVK+ETLSER+GQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK

Query:  A
        A
Subjt:  A

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6D8 Uncharacterized protein

3.5e-92

89.55

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Query:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW
        MASSHLHFLSTPNPIL+LP S P FT PLQ TSKRDLSIK +SQDSESD NFPSPDPNF ALNQPE+FPIEKRRRS+I+R+R+P+T+IAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK
        KRTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVK+ETLSER+GQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK

Query:  A
        A
Subjt:  A

A0A1S3BT06 uncharacterized protein LOC103493403

2.2e-94

92.04

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Query:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW
        MASSHLHFLSTPNPIL+LP S P FT PLQ TSKRDLSIK +SQDSESD NFPSPDPNFSALNQPE+FPIEKRRRSEI+R+R+PTT+IAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVK+ETLSER+GQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK

Query:  A
        A
Subjt:  A

A0A5D3C0F1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1

1.1e-93

91.54

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Query:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW
        MASSHLHFLSTPNPIL+LP S P FT PLQ TSKRDLSIK +SQDSESD NFPSPDP FSALNQPE+FPIEKRRRSEI+R+R+PTT+IAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVK+ETLSER+GQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK

Query:  A
        A
Subjt:  A

A0A6J1EVI2 uncharacterized protein LOC111438454

3.2e-85

84.58

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Query:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW
        MA  HLH L  PNP+L+LP SQP FTNPLQ T KR LS+K SS+ SESD NFPSP+P+F ALNQPESFPIEKRRRSEIVR+RRP+ DI KPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK
        KRTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDLAMVKAAVK+ETLSER+ QAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK

Query:  A
        A
Subjt:  A

A0A6J1JD53 uncharacterized protein LOC111483306

3.5e-84

82.59

Show/hide

Query:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW
        MA  HLH L  PNP+L+LP SQP FTNPLQ T KR LS+K SS+ SESD NFPSPDP+F ALNQPESFP+EKRRRSEIVR+RRP+ +I KPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK
        KRTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDLAMVKAAV++ETL++R+ QAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAK

Query:  A
        A
Subjt:  A

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G51100.1 unknown protein

1.3e-54

69.61

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Query:  PIFTNP-LQNTSKRDLSIKGSSQDSESDQNFP-SPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL
        PI TN  ++ T+K   S K SS     DQ    +P P        E FPIEKRRRSEI+R  R    I KPEPPNFEIGWKRTKEINLEKP G++IMDFL
Subjt:  PIFTNP-LQNTSKRDLSIKGSSQDSESDQNFP-SPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL

Query:  EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAKA
        EK E LM REFGS ELLAK GEIVAERAREEAE+LRD+GKVEERMVTELFRVLKLMEMDLAMVKA+VK+ETLS+RI QA+A
Subjt:  EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAKA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTTCCTCACACCTCCATTTCCTCTCTACTCCAAATCCCATTCTTATTCTTCCTCCATCTCAGCCTATTTTCACGAACCCATTACAAAACACATCAAAACGAGACCT
CTCAATCAAAGGTAGCTCACAAGATTCCGAATCCGACCAAAATTTCCCATCCCCAGATCCCAACTTCAGCGCCCTAAACCAACCAGAGAGTTTCCCAATAGAGAAGCGAA
GAAGGTCCGAAATAGTCCGCAAAAGAAGACCCACAACAGACATCGCAAAGCCGGAGCCGCCCAACTTCGAAATCGGATGGAAGAGGACGAAAGAGATCAATCTGGAGAAG
CCGATCGGGTGGATGATAATGGACTTTCTGGAGAAGCTTGAAGGGTTAATGGAGAGGGAATTTGGGTCGACGGAATTGCTTGCGAAAGTGGGAGAGATTGTGGCGGAGAG
GGCGAGAGAGGAGGCGGAGATCTTGCGAGACGACGGGAAAGTGGAGGAGAGAATGGTAACAGAGCTGTTTAGGGTTTTGAAACTGATGGAAATGGATTTGGCTATGGTGA
AAGCGGCTGTGAAGGAGGAGACGTTGAGTGAGCGGATTGGTCAGGCCAAAGCAAGTTTAGATTATGGTTTGAATTCAGCTGGGTTTGTGATTCTGATTTGGCAATGTGGA
TGTTATGTTAGGCAAGACAATGCCATATACGAAAAGAGCAATGATGAACTTTAG

mRNA sequence

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Protein sequence

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MASSHLHFLSTPNPILILPPSQPIFTNPLQNTSKRDLSIKGSSQDSESDQNFPSPDPNFSALNQPESFPIEKRRRSEIVRKRRPTTDIAKPEPPNFEIGWKRTKEINLEK
PIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERIGQAKASLDYGLNSAGFVILIWQCG
CYVRQDNAIYEKSNDEL

CcUC10G191520 (gene) of Watermelon (PI 537277) v1 genome