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CcUC10G191660 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC10G191660
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionylmG homolog protein 2, chloroplastic
Genome locationCicolChr10:7732173..7737823
RNA-Seq ExpressionCcUC10G191660
SyntenyCcUC10G191660
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR003425 - CCB3/YggT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445540.1 PREDICTED: ylmG homolog protein 2, chloroplastic [Cucumis melo]4.0e-1141.07Show/hide
Query:  SHTPKPSQRRSIFSLFPS-----SSTRSPQRRNPQRRSPHVVMFSRSNHRHIPCRFCR-FHQSSSLSSVAVTSIATVASAVEIHGSFVSTTENYITSDFA
        S    P +  + F+ FP+     S   S     P RR        R      PC F R  H+S +         +T  S + +  SF S  EN       
Subjt:  SHTPKPSQRRSIFSLFPS-----SSTRSPQRRNPQRRSPHVVMFSRSNHRHIPCRFCR-FHQSSSLSSVAVTSIATVASAVEIHGSFVSTTENYITSDFA

Query:  TILPGDFQAF---------------SSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF
        + LP +FQ+F               SSHNFAAVLPGDSM GLVV NGIQNFLSLYNTLLV RLVLTWF
Subjt:  TILPGDFQAF---------------SSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF

XP_022131764.1 ylmG homolog protein 2, chloroplastic [Momordica charantia]4.0e-1145.3Show/hide
Query:  FSRSNHRHI----PCRFCR-FHQS-SSLSSVAVTSIATVASAVEIHGSFVSTTENY--ITSDFATILPGDFQAFSSHNFAAVLPGDSMVGLVVVNGIQNF
        F  S  RH     PC F R  H+S +S +   +  + ++AS        +S +  +         +   +F+A SSHNFAAVLPGDS+ G+VV NGIQNF
Subjt:  FSRSNHRHI----PCRFCR-FHQS-SSLSSVAVTSIATVASAVEIHGSFVSTTENY--ITSDFATILPGDFQAFSSHNFAAVLPGDSMVGLVVVNGIQNF

Query:  LSLYNTLLVNRLVLTWF
        LS+YNTLLV RLVLTWF
Subjt:  LSLYNTLLVNRLVLTWF

XP_022961827.1 ylmG homolog protein 2, chloroplastic [Cucurbita moschata]5.2e-1141.18Show/hide
Query:  PSQRRSIFSLFPSS-STRSPQRRNPQRRSPHVVMFSRSNHRHI----PCRFCR-FHQSSSLSS-VAVTSIATVASAVEIHGSFVSTTENYITSDFATILP
        P +  + FS FP+  S+ SP              F  S  RH+    PC+F R  H+S +L++   +    ++AS        +S +       F   + 
Subjt:  PSQRRSIFSLFPSS-STRSPQRRNPQRRSPHVVMFSRSNHRHI----PCRFCR-FHQSSSLSS-VAVTSIATVASAVEIHGSFVSTTENYITSDFATILP

Query:  G----DFQAFSSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF
        G    +F+A SSHNFAAVLPGDS+ GL+V NGIQNFLS+YNTLLV RLVLTWF
Subjt:  G----DFQAFSSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF

XP_023547092.1 ylmG homolog protein 2, chloroplastic [Cucurbita pepo subsp. pepo]1.8e-1146.22Show/hide
Query:  FSRSNHRHI----PCRFCR-FHQS-SSLSSVAVTSIATVASAVEIHGSFVSTTENYITSDFATILPG----DFQAFSSHNFAAVLPGDSMVGLVVVNGIQ
        F  S  RH+    PC+F R  H+S +S +   +    ++AS        +S +       F   + G    +F+A SSHNFAAVLPGDS+ GL+V NGIQ
Subjt:  FSRSNHRHI----PCRFCR-FHQS-SSLSSVAVTSIATVASAVEIHGSFVSTTENYITSDFATILPG----DFQAFSSHNFAAVLPGDSMVGLVVVNGIQ

Query:  NFLSLYNTLLVNRLVLTWF
        NFLS+YNTLLV RLVLTWF
Subjt:  NFLSLYNTLLVNRLVLTWF

XP_038884266.1 ylmG homolog protein 2, chloroplastic [Benincasa hispida]1.6e-1252.04Show/hide
Query:  EIHGSFVSTTENYITSDFATI-----------LPGDFQAF---------------SSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF
        ++H SF STTE+ I    +             LP +FQ+F               SSHNFAAVLPGDS+ GLVV NG+QNFLSLYNTLLV RLVLTWF
Subjt:  EIHGSFVSTTENYITSDFATI-----------LPGDFQAF---------------SSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF

TrEMBL top hitse value%identityAlignment
A0A0A0KDJ4 Uncharacterized protein5.6e-1139.88Show/hide
Query:  SHTPKPSQRRSIFSLFP----------SSSTRSPQRRNPQRRSPHVVMFSRSNHRHIPCRFCR-FHQS-SSLSSVAVTSIATVASAVEIHGSFVSTTENY
        S    P Q  + F+ FP          S +   P RR     +P             PC F R  H+S +S +   +    ++AS        +S    +
Subjt:  SHTPKPSQRRSIFSLFP----------SSSTRSPQRRNPQRRSPHVVMFSRSNHRHIPCRFCR-FHQS-SSLSSVAVTSIATVASAVEIHGSFVSTTENY

Query:  ITSDFATILPG----DFQAFSSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF
            F   + G    +F+A SSHNFAAVLPGDSM GLVV NGIQNFLSLYNTLLV RLVLTWF
Subjt:  ITSDFATILPG----DFQAFSSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF

A0A1S3BDU1 ylmG homolog protein 2, chloroplastic1.9e-1141.07Show/hide
Query:  SHTPKPSQRRSIFSLFPS-----SSTRSPQRRNPQRRSPHVVMFSRSNHRHIPCRFCR-FHQSSSLSSVAVTSIATVASAVEIHGSFVSTTENYITSDFA
        S    P +  + F+ FP+     S   S     P RR        R      PC F R  H+S +         +T  S + +  SF S  EN       
Subjt:  SHTPKPSQRRSIFSLFPS-----SSTRSPQRRNPQRRSPHVVMFSRSNHRHIPCRFCR-FHQSSSLSSVAVTSIATVASAVEIHGSFVSTTENYITSDFA

Query:  TILPGDFQAF---------------SSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF
        + LP +FQ+F               SSHNFAAVLPGDSM GLVV NGIQNFLSLYNTLLV RLVLTWF
Subjt:  TILPGDFQAF---------------SSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF

A0A5D3BN87 YlmG-like protein 21.9e-1141.07Show/hide
Query:  SHTPKPSQRRSIFSLFPS-----SSTRSPQRRNPQRRSPHVVMFSRSNHRHIPCRFCR-FHQSSSLSSVAVTSIATVASAVEIHGSFVSTTENYITSDFA
        S    P +  + F+ FP+     S   S     P RR        R      PC F R  H+S +         +T  S + +  SF S  EN       
Subjt:  SHTPKPSQRRSIFSLFPS-----SSTRSPQRRNPQRRSPHVVMFSRSNHRHIPCRFCR-FHQSSSLSSVAVTSIATVASAVEIHGSFVSTTENYITSDFA

Query:  TILPGDFQAF---------------SSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF
        + LP +FQ+F               SSHNFAAVLPGDSM GLVV NGIQNFLSLYNTLLV RLVLTWF
Subjt:  TILPGDFQAF---------------SSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF

A0A6J1BR74 ylmG homolog protein 2, chloroplastic1.9e-1145.3Show/hide
Query:  FSRSNHRHI----PCRFCR-FHQS-SSLSSVAVTSIATVASAVEIHGSFVSTTENY--ITSDFATILPGDFQAFSSHNFAAVLPGDSMVGLVVVNGIQNF
        F  S  RH     PC F R  H+S +S +   +  + ++AS        +S +  +         +   +F+A SSHNFAAVLPGDS+ G+VV NGIQNF
Subjt:  FSRSNHRHI----PCRFCR-FHQS-SSLSSVAVTSIATVASAVEIHGSFVSTTENY--ITSDFATILPGDFQAFSSHNFAAVLPGDSMVGLVVVNGIQNF

Query:  LSLYNTLLVNRLVLTWF
        LS+YNTLLV RLVLTWF
Subjt:  LSLYNTLLVNRLVLTWF

A0A6J1HB64 ylmG homolog protein 2, chloroplastic2.5e-1141.18Show/hide
Query:  PSQRRSIFSLFPSS-STRSPQRRNPQRRSPHVVMFSRSNHRHI----PCRFCR-FHQSSSLSS-VAVTSIATVASAVEIHGSFVSTTENYITSDFATILP
        P +  + FS FP+  S+ SP              F  S  RH+    PC+F R  H+S +L++   +    ++AS        +S +       F   + 
Subjt:  PSQRRSIFSLFPSS-STRSPQRRNPQRRSPHVVMFSRSNHRHI----PCRFCR-FHQSSSLSS-VAVTSIATVASAVEIHGSFVSTTENYITSDFATILP

Query:  G----DFQAFSSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF
        G    +F+A SSHNFAAVLPGDS+ GL+V NGIQNFLS+YNTLLV RLVLTWF
Subjt:  G----DFQAFSSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF

SwissProt top hitse value%identityAlignment
Q9C595 YlmG homolog protein 2, chloroplastic4.1e-1173.33Show/hide
Query:  AFSSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF
        A S+H FAAVLPGDS+ GLVV NG+ NFL++YNT+LV RLVLTWF
Subjt:  AFSSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF

Arabidopsis top hitse value%identityAlignment
AT5G21920.1 YGGT family protein2.9e-1273.33Show/hide
Query:  AFSSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF
        A S+H FAAVLPGDS+ GLVV NG+ NFL++YNT+LV RLVLTWF
Subjt:  AFSSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF

AT5G21920.2 YGGT family protein2.9e-1273.33Show/hide
Query:  AFSSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF
        A S+H FAAVLPGDS+ GLVV NG+ NFL++YNT+LV RLVLTWF
Subjt:  AFSSHNFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTCTCTCACACGCCAAAGCCCTCTCAACGTCGAAGCATTTTTTCGTTGTTTCCTTCTTCCTCAACGCGAAGTCCTCAACGTCGAAACCCTCAACGCCGAAGCCC
TCACGTCGTCATGTTCAGCCGCTCCAACCACCGTCACATACCCTGTCGTTTCTGTCGCTTCCATCAATCATCGTCTCTTTCATCCGTCGCTGTCACTTCCATCGCCACCG
TTGCTTCCGCCGTCGAGATCCATGGGTCTTTTGTGTCAACTACTGAAAACTACATCACATCCGATTTTGCTACAATTTTGCCGGGGGATTTCCAAGCTTTCTCTAGTCAC
AATTTTGCTGCAGTTTTGCCGGGGGATTCTATGGTAGGACTTGTAGTCGTTAATGGTATTCAAAATTTCTTGAGCCTCTACAATACACTGTTGGTCAATAGGTTAGTTTT
GACTTGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTCTCTCACACGCCAAAGCCCTCTCAACGTCGAAGCATTTTTTCGTTGTTTCCTTCTTCCTCAACGCGAAGTCCTCAACGTCGAAACCCTCAACGCCGAAGCCC
TCACGTCGTCATGTTCAGCCGCTCCAACCACCGTCACATACCCTGTCGTTTCTGTCGCTTCCATCAATCATCGTCTCTTTCATCCGTCGCTGTCACTTCCATCGCCACCG
TTGCTTCCGCCGTCGAGATCCATGGGTCTTTTGTGTCAACTACTGAAAACTACATCACATCCGATTTTGCTACAATTTTGCCGGGGGATTTCCAAGCTTTCTCTAGTCAC
AATTTTGCTGCAGTTTTGCCGGGGGATTCTATGGTAGGACTTGTAGTCGTTAATGGTATTCAAAATTTCTTGAGCCTCTACAATACACTGTTGGTCAATAGGTTAGTTTT
GACTTGGTTTTGAAGCACACCTCCCGCCATTGTTAGTCCACTAAGGATTTTCAAGCCCAACATGTTCTAGTGCTTTTCTCTGGTTGATCAAGAGTTAAATCAAGCTAGAT
GAGAAGCCTAGAACATACAACTTGAAGATTGTTTTGCTAGCCTGCTAAGCATGATTAGAAAGGCCCATGCTATTGTCTAGTGGGCTTAAAGTTGTTTCAGCCAATTTTTT
GGTATTGGACAAATCTATTGAAGCAAGGGAACCACCAAGCAAATTATTTATGTGTTTTTTTAGATAGTGCTAACATTTTTTTGGCAACACTTAGTTATATGTAGTTTCTT
TGTAAATAACCAAAATTTGGTTACTAGTTTCTTT
Protein sequenceShow/hide protein sequence
MNFSHTPKPSQRRSIFSLFPSSSTRSPQRRNPQRRSPHVVMFSRSNHRHIPCRFCRFHQSSSLSSVAVTSIATVASAVEIHGSFVSTTENYITSDFATILPGDFQAFSSH
NFAAVLPGDSMVGLVVVNGIQNFLSLYNTLLVNRLVLTWF